Wall clock time and date at job start Tue Mar 9 2021 13:40:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86293 * 109.47186 * 2 1 4 4 C 1.50699 * 109.46767 * 240.00105 * 2 1 3 5 5 C 1.33747 * 125.12328 * 299.99957 * 4 2 1 6 6 C 1.37795 * 115.08127 * 180.02562 * 5 4 2 7 7 C 1.34975 * 114.70738 * 0.02562 * 6 5 4 8 8 C 1.47560 * 125.28013 * 180.26508 * 7 6 5 9 9 C 1.39817 * 119.99445 * 359.43786 * 8 7 6 10 10 C 1.36565 * 120.00088 * 179.76171 * 9 8 7 11 11 C 1.39837 * 119.99165 * 0.54349 * 10 9 8 12 12 C 1.47561 * 119.99955 * 179.69452 * 11 10 9 13 13 O 1.21597 * 120.00288 * 180.02562 * 12 11 10 14 14 N 1.34777 * 119.99974 * 0.02562 * 12 11 10 15 15 C 1.46502 * 120.00450 * 180.02562 * 14 12 11 16 16 H 1.09005 * 112.84526 * 23.79354 * 15 14 12 17 17 C 1.53774 * 113.61675 * 154.99843 * 15 14 12 18 18 C 1.53777 * 87.08267 * 89.11796 * 17 15 14 19 19 H 1.09004 * 113.61277 * 270.88311 * 18 17 15 20 20 C 1.50693 * 113.62156 * 139.98087 * 18 17 15 21 21 C 1.38443 * 120.01815 * 119.99343 * 20 18 17 22 22 F 1.35101 * 120.02167 * 0.02906 * 21 20 18 23 23 C 1.38477 * 119.94826 * 180.02562 * 21 20 18 24 24 C 1.38171 * 119.97845 * 0.02562 * 23 21 20 25 25 C 1.38268 * 120.02527 * 0.02562 * 24 23 21 26 26 C 1.38224 * 120.05313 * 359.72433 * 25 24 23 27 27 C 1.53778 * 87.08224 * 25.43131 * 18 17 15 28 28 C 1.39833 * 120.00212 * 359.71209 * 11 10 9 29 29 C 1.36560 * 119.99346 * 0.02562 * 28 11 10 30 30 S 1.75859 * 125.11784 * 120.02428 * 4 2 1 31 31 H 0.96703 * 114.00287 * 299.99876 * 1 2 3 32 32 H 1.09001 * 109.46982 * 120.00676 * 2 1 3 33 33 H 1.48506 * 110.00058 * 178.68432 * 3 2 1 34 34 H 1.48501 * 110.00210 * 300.00105 * 3 2 1 35 35 H 1.07999 * 122.45175 * 0.02562 * 5 4 2 36 36 H 1.08001 * 122.64423 * 180.02562 * 6 5 4 37 37 H 1.08003 * 120.00591 * 0.02562 * 9 8 7 38 38 H 1.07994 * 120.00678 * 180.25595 * 10 9 8 39 39 H 0.97004 * 120.00232 * 359.97438 * 14 12 11 40 40 H 1.09004 * 113.61138 * 203.66131 * 17 15 14 41 41 H 1.08999 * 113.61535 * 334.56413 * 17 15 14 42 42 H 1.08007 * 120.01143 * 179.97438 * 23 21 20 43 43 H 1.08002 * 119.98941 * 179.97438 * 24 23 21 44 44 H 1.08005 * 119.97812 * 179.97438 * 25 24 23 45 45 H 1.07996 * 119.99025 * 180.27627 * 26 25 24 46 46 H 1.09002 * 113.61511 * 220.02167 * 27 18 17 47 47 H 1.08998 * 113.61711 * 89.11948 * 27 18 17 48 48 H 1.07994 * 120.00264 * 180.02562 * 28 11 10 49 49 H 1.08004 * 119.99506 * 179.97438 * 29 28 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9312 -0.7104 -1.2305 5 6 1.6720 -1.9847 -1.5430 6 6 2.2379 -2.4243 -2.7200 7 6 2.9681 -1.4975 -3.3755 8 6 3.6694 -1.7143 -4.6556 9 6 3.6159 -2.9646 -5.2789 10 6 4.2609 -3.1640 -6.4660 11 6 4.9841 -2.1207 -7.0524 12 6 5.6866 -2.3378 -8.3318 13 8 6.3160 -1.4308 -8.8415 14 7 5.6308 -3.5416 -8.9354 15 6 6.3287 -3.7574 -10.2053 16 1 7.1585 -3.0667 -10.3549 17 6 6.6967 -5.2279 -10.4637 18 6 5.3204 -5.3727 -11.1343 19 1 4.5255 -5.6538 -10.4435 20 6 5.3418 -6.2205 -12.3799 21 6 4.5728 -7.3696 -12.4489 22 9 3.8022 -7.7312 -11.3998 23 6 4.5940 -8.1479 -13.5941 24 6 5.3828 -7.7773 -14.6662 25 6 6.1513 -6.6301 -14.5958 26 6 6.1271 -5.8495 -13.4553 27 6 5.3863 -3.8624 -11.4160 28 6 5.0420 -0.8717 -6.4262 29 6 4.3926 -0.6711 -5.2418 30 16 2.9470 0.0113 -2.4715 31 1 -0.3934 0.4417 0.7651 32 1 1.7923 -0.5139 0.8899 33 1 3.5346 1.7702 0.0320 34 1 1.5614 2.4679 -1.2085 35 1 1.0637 -2.6223 -0.9186 36 1 2.1074 -3.4309 -3.0888 37 1 3.0611 -3.7718 -4.8237 38 1 4.2162 -4.1285 -6.9496 39 1 5.1290 -4.2653 -8.5286 40 1 7.5329 -5.3543 -11.1515 41 1 6.8031 -5.8179 -9.5534 42 1 3.9947 -9.0448 -13.6488 43 1 5.3998 -8.3845 -15.5593 44 1 6.7680 -6.3414 -15.4342 45 1 6.7244 -4.9513 -13.4032 46 1 4.4347 -3.3499 -11.2744 47 1 5.8642 -3.6154 -12.3640 48 1 5.6002 -0.0658 -6.8793 49 1 4.4376 0.2934 -4.7580 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705094_13308390.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:40:11 Heat of formation + Delta-G solvation = 6.260197 kcal Electronic energy + Delta-G solvation = -33549.919640 eV Core-core repulsion = 28836.350200 eV Total energy + Delta-G solvation = -4713.569440 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 410.114 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -49.84760 -41.75249 -40.82695 -39.83862 -39.09217 -38.57125 -37.44441 -34.82342 -33.52299 -32.39312 -31.78074 -31.48161 -30.52254 -27.45346 -26.85253 -26.28728 -24.74872 -24.06096 -23.78875 -23.35544 -22.69676 -21.80143 -20.28678 -20.14544 -19.17885 -18.70278 -18.59922 -18.29786 -17.48469 -17.22029 -17.08142 -16.82828 -16.57973 -16.24564 -16.08140 -16.01371 -15.64523 -15.56770 -15.25751 -15.11575 -15.08647 -14.90107 -14.64166 -14.37968 -14.29455 -14.15005 -14.10785 -13.94843 -13.61825 -13.40257 -13.21944 -13.14004 -13.07942 -13.05275 -12.66276 -12.46694 -12.32750 -12.11245 -11.99792 -11.83977 -11.78175 -11.32207 -10.98435 -10.80507 -10.41494 -10.23672 -10.14663 -9.94159 -9.61690 -9.57863 -9.04614 -5.30914 -0.90868 0.12745 0.18159 0.22892 0.29830 0.40606 0.74333 1.12396 1.47945 1.59032 1.85159 1.98553 1.99962 2.53068 2.81682 3.21635 3.26711 3.33221 3.39415 3.50948 3.56984 3.61265 3.66850 3.73035 3.75007 3.77672 3.83900 3.96633 4.05002 4.12931 4.24129 4.24583 4.26464 4.29837 4.38863 4.48656 4.54114 4.57067 4.59720 4.73338 4.78346 4.84994 4.85264 4.90800 4.95557 5.00578 5.03119 5.06351 5.16555 5.19197 5.24362 5.26671 5.32266 5.39921 5.43372 5.51713 5.68809 5.87435 6.40338 6.47715 7.15438 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.034 4.034 3 Si 0.668 3.332 4 C -0.174 4.174 5 C -0.099 4.099 6 C -0.118 4.118 7 C -0.145 4.145 8 C 0.014 3.986 9 C -0.109 4.109 10 C -0.077 4.077 11 C -0.137 4.137 12 C 0.563 3.437 13 O -0.531 6.531 14 N -0.710 5.710 15 C 0.121 3.879 16 H 0.109 0.891 17 C -0.134 4.134 18 C -0.076 4.076 19 H 0.101 0.899 20 C -0.104 4.104 21 C 0.099 3.901 22 F -0.139 7.139 23 C -0.152 4.152 24 C -0.094 4.094 25 C -0.126 4.126 26 C -0.090 4.090 27 C -0.142 4.142 28 C -0.048 4.048 29 C -0.121 4.121 30 S 0.112 5.888 31 H 0.385 0.615 32 H 0.085 0.915 33 H -0.238 1.238 34 H -0.235 1.235 35 H 0.148 0.852 36 H 0.148 0.852 37 H 0.135 0.865 38 H 0.131 0.869 39 H 0.401 0.599 40 H 0.101 0.899 41 H 0.078 0.922 42 H 0.135 0.865 43 H 0.133 0.867 44 H 0.131 0.869 45 H 0.134 0.866 46 H 0.076 0.924 47 H 0.098 0.902 48 H 0.142 0.858 49 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.746 -1.916 2.764 3.445 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.349 6.349 2 C -0.147 4.147 3 Si 0.567 3.433 4 C -0.291 4.291 5 C -0.129 4.129 6 C -0.148 4.148 7 C -0.262 4.262 8 C 0.012 3.988 9 C -0.129 4.129 10 C -0.096 4.096 11 C -0.140 4.140 12 C 0.351 3.649 13 O -0.408 6.408 14 N -0.362 5.362 15 C 0.015 3.985 16 H 0.127 0.873 17 C -0.172 4.172 18 C -0.095 4.095 19 H 0.119 0.881 20 C -0.105 4.105 21 C 0.080 3.920 22 F -0.117 7.117 23 C -0.171 4.171 24 C -0.112 4.112 25 C -0.144 4.144 26 C -0.108 4.108 27 C -0.181 4.181 28 C -0.066 4.066 29 C -0.140 4.140 30 S 0.379 5.621 31 H 0.233 0.767 32 H 0.103 0.897 33 H -0.162 1.162 34 H -0.158 1.158 35 H 0.166 0.834 36 H 0.165 0.835 37 H 0.153 0.847 38 H 0.148 0.852 39 H 0.237 0.763 40 H 0.119 0.881 41 H 0.097 0.903 42 H 0.153 0.847 43 H 0.151 0.849 44 H 0.149 0.851 45 H 0.152 0.848 46 H 0.095 0.905 47 H 0.116 0.884 48 H 0.160 0.840 49 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 0.897 0.485 1.268 1.627 hybrid contribution -1.182 -2.525 0.477 2.828 sum -0.285 -2.040 1.745 2.700 Atomic orbital electron populations 1.86508 1.16764 1.81817 1.49847 1.23970 0.85876 1.09627 0.95254 0.94901 0.82012 0.78210 0.88220 1.23740 1.06683 0.97810 1.00855 1.19991 1.00729 0.94805 0.97394 1.20385 0.98542 1.00556 0.95355 1.23094 1.06123 0.97697 0.99293 1.18298 0.95199 0.94122 0.91159 1.20870 1.00274 0.96290 0.95447 1.20965 0.95376 0.98145 0.95120 1.19985 1.02225 0.95585 0.96230 1.18195 0.80183 0.82320 0.84159 1.90810 1.42189 1.42078 1.65711 1.45587 1.53667 1.13481 1.23422 1.21852 0.95835 0.97740 0.83067 0.87291 1.23433 0.96946 0.95363 1.01446 1.21549 0.98950 0.94581 0.94396 0.88116 1.19731 0.98479 0.95145 0.97178 1.17593 0.93688 0.95457 0.85231 1.91488 1.73095 1.91407 1.55735 1.21204 1.01994 1.00968 0.92902 1.21074 0.95326 0.96753 0.98073 1.21259 0.99706 0.95116 0.98362 1.20945 0.97925 0.99768 0.92160 1.23576 1.01152 0.94391 0.98941 1.20935 0.95934 0.96286 0.93492 1.20964 0.98086 0.98703 0.96211 1.84230 1.49362 1.13471 1.15018 0.76687 0.89723 1.16214 1.15849 0.83440 0.83469 0.84715 0.85172 0.76312 0.88075 0.90308 0.84680 0.84916 0.85137 0.84845 0.90479 0.88397 0.84022 0.85329 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.11 12.83 -35.23 -0.45 -0.34 16 2 C -0.03 0.01 2.95 36.01 0.11 0.12 16 3 Si 0.67 -0.66 30.96 -169.99 -5.26 -5.93 16 4 C -0.17 -0.37 5.76 -35.88 -0.21 -0.57 16 5 C -0.10 -0.15 10.00 -41.32 -0.41 -0.57 16 6 C -0.12 -0.13 9.64 -40.90 -0.39 -0.53 16 7 C -0.15 -0.31 6.37 -36.94 -0.24 -0.55 16 8 C 0.01 0.02 5.88 -104.92 -0.62 -0.59 16 9 C -0.11 0.00 9.48 -39.60 -0.38 -0.38 16 10 C -0.08 0.03 9.48 -39.59 -0.38 -0.34 16 11 C -0.14 -0.23 5.88 -104.90 -0.62 -0.85 16 12 C 0.56 1.56 7.76 -12.46 -0.10 1.47 16 13 O -0.53 -3.38 15.93 5.28 0.08 -3.30 16 14 N -0.71 0.07 5.21 -54.05 -0.28 -0.21 16 15 C 0.12 -0.04 4.32 -67.12 -0.29 -0.33 16 16 H 0.11 0.11 7.46 -51.93 -0.39 -0.27 16 17 C -0.13 0.22 7.29 -25.92 -0.19 0.03 16 18 C -0.08 0.06 3.78 -90.97 -0.34 -0.28 16 19 H 0.10 -0.07 7.45 -51.93 -0.39 -0.46 16 20 C -0.10 -0.03 5.29 -104.55 -0.55 -0.58 16 21 C 0.10 0.15 7.25 -39.42 -0.29 -0.14 16 22 F -0.14 -0.35 16.37 2.25 0.04 -0.31 16 23 C -0.15 -0.07 10.03 -39.52 -0.40 -0.46 16 24 C -0.09 0.06 10.04 -39.60 -0.40 -0.33 16 25 C -0.13 0.12 10.04 -39.58 -0.40 -0.27 16 26 C -0.09 0.07 8.62 -39.59 -0.34 -0.27 16 27 C -0.14 0.10 7.25 -25.92 -0.19 -0.08 16 28 C -0.05 -0.10 9.53 -39.59 -0.38 -0.48 16 29 C -0.12 -0.22 9.54 -39.60 -0.38 -0.60 16 30 S 0.11 0.29 19.46 -107.50 -2.09 -1.80 16 31 H 0.39 -2.07 8.74 45.56 0.40 -1.67 16 32 H 0.09 -0.19 7.96 -51.93 -0.41 -0.60 16 33 H -0.24 -0.29 7.11 56.52 0.40 0.11 16 34 H -0.24 -0.52 7.11 56.52 0.40 -0.12 16 35 H 0.15 0.02 8.06 -52.49 -0.42 -0.41 16 36 H 0.15 -0.19 6.88 -52.49 -0.36 -0.55 16 37 H 0.14 -0.29 6.74 -52.48 -0.35 -0.64 16 38 H 0.13 -0.43 6.38 -52.49 -0.34 -0.77 16 39 H 0.40 -0.98 6.71 -40.82 -0.27 -1.25 16 40 H 0.10 -0.22 7.73 -51.93 -0.40 -0.62 16 41 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 42 H 0.14 -0.12 8.06 -52.48 -0.42 -0.54 16 43 H 0.13 -0.35 8.06 -52.49 -0.42 -0.77 16 44 H 0.13 -0.37 8.06 -52.48 -0.42 -0.79 16 45 H 0.13 -0.33 6.65 -52.49 -0.35 -0.68 16 46 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 47 H 0.10 -0.15 6.30 -51.93 -0.33 -0.48 16 48 H 0.14 0.30 7.64 -52.49 -0.40 -0.10 16 49 H 0.13 0.13 7.26 -52.48 -0.38 -0.25 16 LS Contribution 423.59 15.07 6.38 6.38 Total: 0.00 -9.30 423.59 -14.65 -23.95 By element: Atomic # 1 Polarization: -6.14 SS G_CDS: -5.71 Total: -11.84 kcal Atomic # 6 Polarization: 0.76 SS G_CDS: -7.36 Total: -6.60 kcal Atomic # 7 Polarization: 0.07 SS G_CDS: -0.28 Total: -0.21 kcal Atomic # 8 Polarization: -3.27 SS G_CDS: -0.37 Total: -3.64 kcal Atomic # 9 Polarization: -0.35 SS G_CDS: 0.04 Total: -0.31 kcal Atomic # 14 Polarization: -0.66 SS G_CDS: -5.26 Total: -5.93 kcal Atomic # 16 Polarization: 0.29 SS G_CDS: -2.09 Total: -1.80 kcal Total LS contribution 6.38 Total: 6.38 kcal Total: -9.30 -14.65 -23.95 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705094_13308390.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 30.212 kcal (2) G-P(sol) polarization free energy of solvation -9.300 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 20.912 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.652 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.952 kcal (6) G-S(sol) free energy of system = (1) + (5) 6.260 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds