Wall clock time and date at job start Tue Mar 9 2021 13:41:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86299 * 109.47010 * 2 1 4 4 C 1.50697 * 109.47149 * 120.00308 * 2 1 3 5 5 C 1.38243 * 119.97129 * 244.99791 * 4 2 1 6 6 C 1.38286 * 120.11571 * 179.97438 * 5 4 2 7 7 C 1.38125 * 120.05143 * 0.04277 * 6 5 4 8 8 C 1.38755 * 119.94633 * 359.97438 * 7 6 5 9 9 O 1.35902 * 120.05708 * 180.02562 * 8 7 6 10 10 C 1.42897 * 116.99643 * 359.97438 * 9 8 7 11 11 C 1.53003 * 109.47014 * 179.97438 * 10 9 8 12 12 C 1.52998 * 109.47323 * 180.02562 * 11 10 9 13 13 C 1.50699 * 109.47006 * 180.02562 * 12 11 10 14 14 O 1.21281 * 120.00020 * 0.02562 * 13 12 11 15 15 N 1.34778 * 120.00226 * 180.02562 * 13 12 11 16 16 C 1.46501 * 120.00347 * 180.02562 * 15 13 12 17 17 H 1.09003 * 112.84754 * 336.19009 * 16 15 13 18 18 C 1.53778 * 113.69011 * 107.46341 * 16 15 13 19 19 C 1.53777 * 87.07900 * 89.12887 * 18 16 15 20 20 H 1.09002 * 113.68816 * 270.86709 * 19 18 16 21 21 C 1.50702 * 113.61658 * 139.98243 * 19 18 16 22 22 C 1.38431 * 120.01798 * 142.50045 * 21 19 18 23 23 F 1.35104 * 120.02518 * 359.97223 * 22 21 19 24 24 C 1.38478 * 119.95191 * 180.02562 * 22 21 19 25 25 C 1.38183 * 119.97265 * 359.97438 * 24 22 21 26 26 C 1.38265 * 120.02475 * 359.97438 * 25 24 22 27 27 C 1.38221 * 120.00788 * 322.77568 * 21 19 18 28 28 C 1.53777 * 87.08555 * 25.43163 * 19 18 16 29 29 C 1.38168 * 119.97456 * 65.30122 * 4 2 1 30 30 H 0.96702 * 113.99859 * 59.99793 * 1 2 3 31 31 H 1.08996 * 109.46792 * 240.00610 * 2 1 3 32 32 H 1.48506 * 109.99924 * 60.00009 * 3 2 1 33 33 H 1.48497 * 110.00125 * 181.32135 * 3 2 1 34 34 H 1.08003 * 119.94559 * 0.02562 * 5 4 2 35 35 H 1.07998 * 119.97620 * 180.02562 * 6 5 4 36 36 H 1.08000 * 120.02933 * 179.97438 * 7 6 5 37 37 H 1.09006 * 109.47005 * 60.00623 * 10 9 8 38 38 H 1.08991 * 109.47589 * 300.00022 * 10 9 8 39 39 H 1.09007 * 109.46452 * 59.99978 * 11 10 9 40 40 H 1.09001 * 109.47070 * 300.00976 * 11 10 9 41 41 H 1.08998 * 109.47063 * 60.00164 * 12 11 10 42 42 H 1.08998 * 109.46954 * 299.99770 * 12 11 10 43 43 H 0.97003 * 119.99337 * 0.02562 * 15 13 12 44 44 H 1.08989 * 113.61591 * 334.57405 * 18 16 15 45 45 H 1.09007 * 113.60786 * 203.67673 * 18 16 15 46 46 H 1.08004 * 120.01856 * 180.02562 * 24 22 21 47 47 H 1.08002 * 119.98375 * 180.02562 * 25 24 22 48 48 H 1.08002 * 119.97048 * 179.97438 * 26 25 24 49 49 H 1.08000 * 119.99099 * 0.02562 * 27 21 19 50 50 H 1.08990 * 113.61516 * 89.11810 * 28 19 18 51 51 H 1.08998 * 113.61275 * 219.93989 * 28 19 18 52 52 H 1.07999 * 120.02313 * 359.97438 * 29 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 2.6388 -0.0118 2.1909 6 6 3.1007 -0.6606 3.3213 7 6 2.8569 -2.0093 3.4930 8 6 2.1474 -2.7129 2.5303 9 8 1.9057 -4.0399 2.6972 10 6 2.4121 -4.6467 3.8877 11 6 2.0440 -6.1318 3.8994 12 6 2.5855 -6.7814 5.1743 13 6 2.2234 -8.2443 5.1855 14 8 1.5946 -8.7204 4.2641 15 7 2.5984 -9.0235 6.2193 16 6 2.2469 -10.4457 6.2299 17 1 1.3761 -10.6710 5.6142 18 6 3.4415 -11.3793 5.9728 19 6 3.6742 -11.3710 7.4928 20 1 4.3274 -10.5668 7.8315 21 6 4.0635 -12.7155 8.0513 22 6 4.9960 -12.7981 9.0712 23 9 5.5579 -11.6735 9.5661 24 6 5.3531 -14.0342 9.5830 25 6 4.7781 -15.1838 9.0756 26 6 3.8461 -15.1000 8.0577 27 6 3.4939 -13.8670 7.5415 28 6 2.1771 -11.0524 7.6412 29 6 1.6900 -2.0609 1.3946 30 1 -0.3933 0.4417 -0.7651 31 1 1.7923 -0.5137 -0.8900 32 1 1.5615 2.4679 1.2085 33 1 3.5346 1.7704 -0.0322 34 1 2.8304 1.0429 2.0586 35 1 3.6527 -0.1125 4.0705 36 1 3.2181 -2.5158 4.3758 37 1 1.9756 -4.1578 4.7587 38 1 3.4964 -4.5406 3.9168 39 1 2.4800 -6.6210 3.0283 40 1 0.9595 -6.2375 3.8704 41 1 2.1491 -6.2921 6.0450 42 1 3.6699 -6.6757 5.2035 43 1 3.1010 -8.6425 6.9563 44 1 4.2463 -10.9124 5.4053 45 1 3.1562 -12.3553 5.5800 46 1 6.0802 -14.0999 10.3790 47 1 5.0562 -16.1479 9.4750 48 1 3.3976 -15.9990 7.6616 49 1 2.7701 -13.8033 6.7425 50 1 1.5463 -11.9390 7.7046 51 1 1.9613 -10.3226 8.4215 52 1 1.1412 -2.6072 0.6418 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705094_4549616.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:41:31 Heat of formation + Delta-G solvation = -73.322112 kcal Electronic energy + Delta-G solvation = -33013.755825 eV Core-core repulsion = 28246.267941 eV Total energy + Delta-G solvation = -4767.487884 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.173 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -49.93518 -41.60607 -41.34636 -40.31885 -39.21408 -38.79046 -37.36128 -34.95977 -34.60172 -32.68925 -31.91940 -31.45450 -31.30228 -28.51963 -26.90525 -26.77401 -26.15246 -24.05220 -23.82258 -23.48014 -22.62675 -21.87643 -21.50008 -20.18585 -19.02228 -18.80095 -18.43035 -18.21522 -17.56586 -17.50363 -17.43815 -17.16620 -16.96362 -16.76953 -16.66206 -16.37550 -15.91127 -15.51798 -15.29797 -15.25508 -15.09709 -14.81549 -14.63966 -14.62629 -14.36116 -14.15647 -14.06792 -13.92457 -13.59646 -13.50569 -13.32124 -13.28671 -13.02716 -12.97987 -12.65198 -12.46643 -12.38177 -12.28055 -12.12589 -11.94107 -11.78594 -11.78105 -11.66324 -11.27877 -11.00873 -10.39418 -10.14124 -10.01020 -9.89569 -9.59700 -9.38804 -4.93897 0.07544 0.16115 0.22554 0.23892 1.27287 1.55444 1.65033 1.85130 1.96648 2.29522 2.51391 2.58484 3.24875 3.38404 3.40082 3.55231 3.57186 3.64061 3.70049 3.80202 3.81063 3.83494 3.84494 3.90724 3.97321 4.07392 4.09223 4.14888 4.15275 4.28814 4.30892 4.34068 4.36752 4.37031 4.39978 4.56952 4.59040 4.63534 4.70301 4.81596 4.85280 4.86074 4.93375 4.96488 4.97594 5.06640 5.07848 5.10770 5.17106 5.21067 5.23198 5.29866 5.38783 5.46871 5.57418 5.58224 5.93338 6.31767 6.47926 6.87808 7.19797 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.565 6.565 2 C -0.088 4.088 3 Si 0.786 3.214 4 C -0.052 4.052 5 C -0.184 4.184 6 C -0.074 4.074 7 C -0.205 4.205 8 C 0.123 3.877 9 O -0.333 6.333 10 C 0.055 3.945 11 C -0.100 4.100 12 C -0.128 4.128 13 C 0.512 3.488 14 O -0.585 6.585 15 N -0.704 5.704 16 C 0.116 3.884 17 H 0.088 0.912 18 C -0.138 4.138 19 C -0.072 4.072 20 H 0.099 0.901 21 C -0.111 4.111 22 C 0.072 3.928 23 F -0.150 7.150 24 C -0.163 4.163 25 C -0.099 4.099 26 C -0.128 4.128 27 C -0.096 4.096 28 C -0.123 4.123 29 C -0.147 4.147 30 H 0.404 0.596 31 H 0.091 0.909 32 H -0.293 1.293 33 H -0.286 1.286 34 H 0.121 0.879 35 H 0.155 0.845 36 H 0.159 0.841 37 H 0.083 0.917 38 H 0.084 0.916 39 H 0.062 0.938 40 H 0.061 0.939 41 H 0.128 0.872 42 H 0.127 0.873 43 H 0.417 0.583 44 H 0.067 0.933 45 H 0.103 0.897 46 H 0.142 0.858 47 H 0.152 0.848 48 H 0.151 0.849 49 H 0.149 0.851 50 H 0.105 0.895 51 H 0.085 0.915 52 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.107 -0.187 2.152 3.018 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.375 6.375 2 C -0.197 4.197 3 Si 0.691 3.309 4 C -0.052 4.052 5 C -0.201 4.201 6 C -0.092 4.092 7 C -0.224 4.224 8 C 0.078 3.922 9 O -0.247 6.247 10 C -0.019 4.019 11 C -0.139 4.139 12 C -0.168 4.168 13 C 0.301 3.699 14 O -0.465 6.465 15 N -0.355 5.355 16 C 0.010 3.990 17 H 0.106 0.894 18 C -0.177 4.177 19 C -0.090 4.090 20 H 0.118 0.882 21 C -0.112 4.112 22 C 0.053 3.947 23 F -0.129 7.129 24 C -0.182 4.182 25 C -0.117 4.117 26 C -0.146 4.146 27 C -0.113 4.113 28 C -0.160 4.160 29 C -0.165 4.165 30 H 0.255 0.745 31 H 0.109 0.891 32 H -0.221 1.221 33 H -0.214 1.214 34 H 0.138 0.862 35 H 0.173 0.827 36 H 0.177 0.823 37 H 0.101 0.899 38 H 0.102 0.898 39 H 0.081 0.919 40 H 0.080 0.920 41 H 0.146 0.854 42 H 0.145 0.855 43 H 0.254 0.746 44 H 0.085 0.915 45 H 0.121 0.879 46 H 0.160 0.840 47 H 0.170 0.830 48 H 0.169 0.831 49 H 0.167 0.833 50 H 0.124 0.876 51 H 0.103 0.897 52 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 2.139 -0.352 2.363 3.206 hybrid contribution 0.577 -0.316 0.805 1.040 sum 2.716 -0.668 3.168 4.226 Atomic orbital electron populations 1.86453 1.17175 1.82519 1.51351 1.25003 0.85992 1.11798 0.96900 0.94310 0.77254 0.74714 0.84588 1.19496 0.96878 0.93087 0.95785 1.21022 1.03377 0.99485 0.96246 1.21222 0.97149 0.94093 0.96738 1.21588 1.03980 0.95762 1.01030 1.19183 0.95087 0.83250 0.94714 1.86059 1.74713 1.19891 1.44035 1.23038 0.99989 0.93144 0.85716 1.21146 1.02084 0.92297 0.98337 1.21539 1.05283 0.89973 0.99985 1.21151 0.77812 0.89770 0.81192 1.90734 1.41820 1.76596 1.37372 1.45634 1.57462 1.08810 1.23636 1.21807 0.98177 0.80597 0.98453 0.89356 1.23547 0.98394 1.00862 0.94872 1.21506 0.97683 0.93682 0.96160 0.88234 1.19898 0.97578 0.97125 0.96623 1.17894 0.97079 0.82557 0.97147 1.91449 1.83976 1.50668 1.86825 1.21419 1.02894 0.91340 1.02533 1.21368 0.95672 0.98575 0.96111 1.21589 0.97690 0.98677 0.96668 1.21195 0.99412 0.91016 0.99719 1.23368 0.94883 1.01895 0.95897 1.20388 1.03950 0.94156 0.98044 0.74488 0.89072 1.22116 1.21358 0.86156 0.82746 0.82321 0.89905 0.89753 0.91925 0.91971 0.85437 0.85520 0.74620 0.91464 0.87911 0.84039 0.83015 0.83130 0.83332 0.87649 0.89677 0.85340 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.52 12.81 -148.98 -1.91 -3.43 16 2 C -0.09 -0.19 2.79 71.24 0.20 0.00 16 3 Si 0.79 -0.68 29.85 68.60 2.05 1.36 16 4 C -0.05 -0.41 5.38 -19.88 -0.11 -0.52 16 5 C -0.18 -1.26 8.67 22.28 0.19 -1.06 16 6 C -0.07 -0.26 10.04 22.25 0.22 -0.04 16 7 C -0.21 -0.65 9.04 22.37 0.20 -0.45 16 8 C 0.12 0.95 6.69 22.51 0.15 1.11 16 9 O -0.33 -2.49 10.14 -92.45 -0.94 -3.43 16 10 C 0.06 -0.06 4.74 71.98 0.34 0.28 16 11 C -0.10 -0.07 4.87 30.59 0.15 0.08 16 12 C -0.13 0.73 5.70 29.85 0.17 0.90 16 13 C 0.51 0.86 7.83 87.66 0.69 1.55 16 14 O -0.59 -7.14 15.58 -3.03 -0.05 -7.19 16 15 N -0.70 2.22 5.27 -440.04 -2.32 -0.10 16 16 C 0.12 -0.16 4.32 45.52 0.20 0.03 16 17 H 0.09 0.25 7.46 -2.39 -0.02 0.24 16 18 C -0.14 0.28 7.25 31.12 0.23 0.50 16 19 C -0.07 0.17 3.78 -11.02 -0.04 0.13 16 20 H 0.10 -0.22 7.45 -2.39 -0.02 -0.23 16 21 C -0.11 -0.03 5.29 -19.82 -0.10 -0.13 16 22 C 0.07 0.23 7.25 22.37 0.16 0.39 16 23 F -0.15 -0.83 16.36 44.97 0.74 -0.09 16 24 C -0.16 -0.12 10.03 22.31 0.22 0.10 16 25 C -0.10 0.23 10.04 22.26 0.22 0.45 16 26 C -0.13 0.41 10.04 22.27 0.22 0.63 16 27 C -0.10 0.23 8.62 22.26 0.19 0.42 16 28 C -0.12 0.53 7.29 31.12 0.23 0.75 16 29 C -0.15 -1.39 9.63 22.37 0.22 -1.18 16 30 H 0.40 -3.41 8.74 -74.06 -0.65 -4.05 16 31 H 0.09 -0.13 7.96 -2.39 -0.02 -0.15 16 32 H -0.29 -1.79 7.05 99.48 0.70 -1.09 16 33 H -0.29 -1.19 7.11 99.48 0.71 -0.48 16 34 H 0.12 0.67 4.86 -2.91 -0.01 0.66 16 35 H 0.15 -0.36 8.06 -2.91 -0.02 -0.38 16 36 H 0.16 -0.53 6.30 -2.91 -0.02 -0.55 16 37 H 0.08 -0.39 7.66 -2.38 -0.02 -0.40 16 38 H 0.08 -0.42 7.66 -2.39 -0.02 -0.44 16 39 H 0.06 0.31 8.10 -2.38 -0.02 0.29 16 40 H 0.06 0.32 8.10 -2.39 -0.02 0.30 16 41 H 0.13 -1.40 8.14 -2.39 -0.02 -1.42 16 42 H 0.13 -1.38 8.14 -2.39 -0.02 -1.40 16 43 H 0.42 -3.75 8.70 -92.71 -0.81 -4.56 16 44 H 0.07 0.00 8.14 -2.39 -0.02 -0.02 16 45 H 0.10 -0.34 6.30 -2.38 -0.02 -0.36 16 46 H 0.14 -0.23 8.06 -2.91 -0.02 -0.25 16 47 H 0.15 -1.02 8.06 -2.91 -0.02 -1.05 16 48 H 0.15 -1.15 8.06 -2.91 -0.02 -1.17 16 49 H 0.15 -0.90 6.64 -2.91 -0.02 -0.92 16 50 H 0.11 -0.55 7.73 -2.39 -0.02 -0.56 16 51 H 0.08 -0.45 8.14 -2.39 -0.02 -0.47 16 52 H 0.13 1.22 8.06 -2.91 -0.02 1.19 16 Total: 0.00 -27.28 430.00 1.07 -26.22 By element: Atomic # 1 Polarization: -16.83 SS G_CDS: -0.46 Total: -17.29 kcal Atomic # 6 Polarization: 0.00 SS G_CDS: 3.95 Total: 3.95 kcal Atomic # 7 Polarization: 2.22 SS G_CDS: -2.32 Total: -0.10 kcal Atomic # 8 Polarization: -11.16 SS G_CDS: -2.89 Total: -14.05 kcal Atomic # 9 Polarization: -0.83 SS G_CDS: 0.74 Total: -0.09 kcal Atomic # 14 Polarization: -0.68 SS G_CDS: 2.05 Total: 1.36 kcal Total: -27.28 1.07 -26.22 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705094_4549616.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -47.106 kcal (2) G-P(sol) polarization free energy of solvation -27.284 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -74.390 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.067 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.216 kcal (6) G-S(sol) free energy of system = (1) + (5) -73.322 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds