Wall clock time and date at job start Tue Mar 9 2021 13:42:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86308 * 109.47105 * 2 1 4 4 C 1.50696 * 109.47469 * 239.99928 * 2 1 3 5 5 C 1.38251 * 119.94042 * 299.97466 * 4 2 1 6 6 C 1.38173 * 120.04969 * 179.76499 * 5 4 2 7 7 N 1.48005 * 120.02104 * 180.25559 * 6 5 4 8 8 O 1.21793 * 120.00352 * 0.28173 * 7 6 5 9 9 O 1.21809 * 119.99562 * 180.27693 * 7 6 5 10 10 C 1.38705 * 119.94516 * 0.53500 * 6 5 4 11 11 O 1.35901 * 120.05442 * 179.74138 * 10 6 5 12 12 C 1.42901 * 116.99924 * 179.72069 * 11 10 6 13 13 C 1.50705 * 109.46987 * 180.02562 * 12 11 10 14 14 O 1.21275 * 119.99947 * 0.02562 * 13 12 11 15 15 N 1.34776 * 119.99715 * 180.02562 * 13 12 11 16 16 C 1.46505 * 119.99597 * 180.02562 * 15 13 12 17 17 H 1.08998 * 112.91090 * 23.74977 * 16 15 13 18 18 C 1.53781 * 113.61334 * 154.99978 * 16 15 13 19 19 C 1.53786 * 87.17350 * 89.07333 * 18 16 15 20 20 H 1.09000 * 113.60973 * 270.92699 * 19 18 16 21 21 C 1.50690 * 113.61518 * 140.02616 * 19 18 16 22 22 C 1.38434 * 120.01739 * 119.99865 * 21 19 18 23 23 F 1.35106 * 120.02287 * 359.97438 * 22 21 19 24 24 C 1.38483 * 119.95471 * 179.97438 * 22 21 19 25 25 C 1.38179 * 119.96798 * 359.97438 * 24 22 21 26 26 C 1.38265 * 120.02826 * 0.02562 * 25 24 22 27 27 C 1.38224 * 120.05180 * 359.71776 * 26 25 24 28 28 C 1.53781 * 113.61146 * 252.49455 * 16 15 13 29 29 C 1.38750 * 119.89007 * 359.47191 * 10 6 5 30 30 C 1.38127 * 119.94373 * 0.24606 * 29 10 6 31 31 H 0.96706 * 114.00270 * 60.00300 * 1 2 3 32 32 H 1.08999 * 109.47172 * 119.99388 * 2 1 3 33 33 H 1.48497 * 110.00018 * 59.99822 * 3 2 1 34 34 H 1.48497 * 109.99886 * 181.31869 * 3 2 1 35 35 H 1.07992 * 119.97237 * 0.02562 * 5 4 2 36 36 H 1.09000 * 109.46954 * 60.01071 * 12 11 10 37 37 H 1.08993 * 109.47307 * 300.00368 * 12 11 10 38 38 H 0.96995 * 120.00232 * 359.97438 * 15 13 12 39 39 H 1.09002 * 113.61445 * 203.66333 * 18 16 15 40 40 H 1.09002 * 113.61408 * 334.48063 * 18 16 15 41 41 H 1.07997 * 120.01768 * 179.97438 * 24 22 21 42 42 H 1.08002 * 119.98353 * 179.97438 * 25 24 22 43 43 H 1.07999 * 119.97504 * 180.02562 * 26 25 24 44 44 H 1.07998 * 119.98657 * 180.27854 * 27 26 25 45 45 H 1.09005 * 113.61471 * 25.43638 * 28 16 15 46 46 H 1.08996 * 113.61178 * 156.24980 * 28 16 15 47 47 H 1.08006 * 120.02776 * 180.23318 * 29 10 6 48 48 H 1.07998 * 119.97169 * 180.02562 * 30 29 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 1.5971 -2.0342 -1.4477 6 6 2.0525 -2.6863 -2.5775 7 7 1.6896 -4.1018 -2.8123 8 8 0.9851 -4.6907 -2.0122 9 8 2.0955 -4.6778 -3.8060 10 6 2.8547 -2.0150 -3.4884 11 8 3.3082 -2.6558 -4.5977 12 6 4.1246 -1.9006 -5.4950 13 6 4.5296 -2.7695 -6.6579 14 8 4.1555 -3.9217 -6.7130 15 7 5.3075 -2.2659 -7.6365 16 6 5.7007 -3.1104 -8.7672 17 1 5.0144 -3.9403 -8.9358 18 6 6.0331 -2.3173 -10.0421 19 6 7.4800 -2.2419 -9.5264 20 1 7.6729 -1.3765 -8.8924 21 6 8.5157 -2.4205 -10.6063 22 6 9.4322 -1.4144 -10.8599 23 9 9.3983 -0.2717 -10.1399 24 6 10.3839 -1.5801 -11.8522 25 6 10.4179 -2.7495 -12.5876 26 6 9.5021 -3.7536 -12.3334 27 6 8.5551 -3.5915 -11.3396 28 6 7.1797 -3.5304 -8.7373 29 6 3.1889 -0.6865 -3.2679 30 6 2.7263 -0.0373 -2.1399 31 1 -0.3934 0.4417 -0.7651 32 1 1.7923 -0.5137 0.8900 33 1 1.5614 2.4680 1.2084 34 1 3.5345 1.7703 -0.0321 35 1 0.9761 -2.5576 -0.7359 36 1 5.0160 -1.5549 -4.9716 37 1 3.5627 -1.0417 -5.8620 38 1 5.6063 -1.3442 -7.5926 39 1 5.9258 -2.8982 -10.9582 40 1 5.5373 -1.3480 -10.0951 41 1 11.0991 -0.7958 -12.0513 42 1 11.1598 -2.8788 -13.3618 43 1 9.5297 -4.6674 -12.9084 44 1 7.8431 -4.3783 -11.1389 45 1 7.6108 -3.5398 -7.7361 46 1 7.3856 -4.4437 -9.2953 47 1 3.8103 -0.1605 -3.9776 48 1 2.9858 0.9969 -1.9680 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705094_4549638.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:42:00 Heat of formation + Delta-G solvation = -53.766045 kcal Electronic energy + Delta-G solvation = -36560.126699 eV Core-core repulsion = 31273.545633 eV Total energy + Delta-G solvation = -5286.581066 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 403.136 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -49.89963 -43.02874 -41.89459 -41.45404 -40.40898 -39.57490 -38.70735 -37.53495 -37.12700 -34.80383 -33.52116 -32.42973 -32.05968 -31.53886 -29.96466 -27.60542 -26.91933 -26.82641 -26.27808 -24.31586 -23.80854 -22.91765 -22.74305 -22.04142 -20.53696 -20.32574 -19.45986 -19.20940 -18.92703 -18.44669 -18.35119 -18.25133 -17.69876 -17.54339 -17.34771 -16.98329 -16.87880 -16.62848 -16.51282 -16.29588 -15.82861 -15.80785 -15.44601 -15.36023 -15.16024 -14.95487 -14.76408 -14.30119 -14.14904 -14.08629 -13.98656 -13.86807 -13.65418 -13.31635 -13.18497 -13.13226 -12.59300 -12.51134 -12.42042 -12.20383 -12.12955 -12.06203 -11.90853 -11.85568 -11.73910 -11.39800 -11.02428 -10.94508 -10.77545 -10.28376 -9.98823 -9.91814 -9.66231 -5.31275 -1.14079 -0.39304 0.08436 0.14147 0.37340 0.52483 0.99251 1.04743 1.35276 1.35623 1.74709 1.92457 2.13884 2.48819 2.97418 3.00348 3.15813 3.19044 3.23306 3.27240 3.36134 3.43814 3.48487 3.52269 3.55042 3.61344 3.68381 3.70042 3.77819 3.92387 3.99548 4.13253 4.14619 4.19858 4.25574 4.29471 4.41920 4.47142 4.54101 4.65133 4.66589 4.70526 4.80272 4.83611 4.91341 4.92522 4.98833 5.12186 5.24347 5.35711 5.38905 5.45060 5.69487 5.83291 6.19830 6.31975 6.93232 6.98224 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.066 4.066 3 Si 0.692 3.308 4 C -0.158 4.158 5 C 0.009 3.991 6 C -0.075 4.075 7 N 0.028 4.972 8 O -0.177 6.177 9 O -0.118 6.118 10 C 0.200 3.800 11 O -0.253 6.253 12 C 0.031 3.969 13 C 0.517 3.483 14 O -0.493 6.493 15 N -0.711 5.711 16 C 0.122 3.878 17 H 0.111 0.889 18 C -0.133 4.133 19 C -0.076 4.076 20 H 0.101 0.899 21 C -0.105 4.105 22 C 0.099 3.901 23 F -0.139 7.139 24 C -0.152 4.152 25 C -0.094 4.094 26 C -0.126 4.126 27 C -0.090 4.090 28 C -0.142 4.142 29 C -0.209 4.209 30 C -0.025 4.025 31 H 0.381 0.619 32 H 0.121 0.879 33 H -0.248 1.248 34 H -0.254 1.254 35 H 0.165 0.835 36 H 0.102 0.898 37 H 0.103 0.897 38 H 0.402 0.598 39 H 0.102 0.898 40 H 0.079 0.921 41 H 0.135 0.865 42 H 0.133 0.867 43 H 0.131 0.869 44 H 0.134 0.866 45 H 0.076 0.924 46 H 0.099 0.901 47 H 0.157 0.843 48 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.619 8.900 -4.398 10.566 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.176 4.176 3 Si 0.593 3.407 4 C -0.159 4.159 5 C -0.010 4.010 6 C -0.160 4.160 7 N 0.548 4.452 8 O -0.385 6.385 9 O -0.342 6.342 10 C 0.150 3.850 11 O -0.163 6.163 12 C -0.048 4.048 13 C 0.300 3.700 14 O -0.364 6.364 15 N -0.365 5.365 16 C 0.017 3.983 17 H 0.129 0.871 18 C -0.171 4.171 19 C -0.094 4.094 20 H 0.119 0.881 21 C -0.106 4.106 22 C 0.080 3.920 23 F -0.118 7.118 24 C -0.171 4.171 25 C -0.112 4.112 26 C -0.144 4.144 27 C -0.108 4.108 28 C -0.181 4.181 29 C -0.228 4.228 30 C -0.043 4.043 31 H 0.229 0.771 32 H 0.138 0.862 33 H -0.173 1.173 34 H -0.179 1.179 35 H 0.182 0.818 36 H 0.120 0.880 37 H 0.121 0.879 38 H 0.237 0.763 39 H 0.120 0.880 40 H 0.097 0.903 41 H 0.153 0.847 42 H 0.151 0.849 43 H 0.149 0.851 44 H 0.152 0.848 45 H 0.095 0.905 46 H 0.117 0.883 47 H 0.174 0.826 48 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 3.999 8.827 -3.317 10.242 hybrid contribution 0.481 0.015 0.169 0.510 sum 4.479 8.842 -3.148 10.399 Atomic orbital electron populations 1.86561 1.16575 1.81614 1.49332 1.25095 0.85697 1.10252 0.96571 0.94903 0.80699 0.76990 0.88091 1.20318 1.02222 0.93979 0.99385 1.20840 0.93531 0.93554 0.93045 1.20589 1.10453 0.84144 1.00795 1.43339 0.99205 1.02265 1.00346 1.94557 1.35009 1.66720 1.42257 1.94700 1.54821 1.67465 1.17198 1.18688 0.89883 0.90801 0.85620 1.86502 1.62818 1.37486 1.29447 1.22723 0.96411 0.94908 0.90734 1.19807 0.79011 0.88164 0.82995 1.90869 1.52298 1.17050 1.76218 1.45451 1.52598 1.15721 1.22727 1.21860 0.96568 0.94523 0.85313 0.87103 1.23431 0.94472 1.01584 0.97593 1.21596 0.92796 0.99789 0.95266 0.88094 1.19711 0.97314 0.94209 0.99402 1.17586 0.97741 0.83141 0.93522 1.91486 1.95984 1.47870 1.76438 1.21209 0.99416 0.99835 0.96616 1.21084 0.98662 0.92575 0.98863 1.21267 0.95418 0.99618 0.98099 1.20951 0.98650 0.96342 0.94826 1.23627 0.95720 0.97446 1.01258 1.21275 1.07107 0.92647 1.01794 1.21269 0.91864 0.99830 0.91314 0.77123 0.86158 1.17267 1.17924 0.81800 0.88010 0.87884 0.76290 0.88005 0.90272 0.84681 0.84899 0.85103 0.84807 0.90481 0.88296 0.82585 0.83397 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.90 12.77 -35.23 -0.45 0.45 16 2 C -0.07 0.17 2.82 36.00 0.10 0.27 16 3 Si 0.69 -2.65 29.78 -169.99 -5.06 -7.71 16 4 C -0.16 0.34 5.39 -104.60 -0.56 -0.22 16 5 C 0.01 0.00 9.12 -39.60 -0.36 -0.36 16 6 C -0.08 -0.20 6.87 -79.81 -0.55 -0.75 16 7 N 0.03 0.18 4.45 34.03 0.15 0.33 16 8 O -0.18 -1.28 18.45 -29.46 -0.54 -1.82 16 9 O -0.12 -1.00 17.24 -36.49 -0.63 -1.63 16 10 C 0.20 0.10 6.67 -39.22 -0.26 -0.16 16 11 O -0.25 -0.49 7.68 -49.78 -0.38 -0.87 16 12 C 0.03 -0.09 5.22 36.01 0.19 0.10 16 13 C 0.52 0.10 7.91 -10.98 -0.09 0.01 16 14 O -0.49 -2.83 16.10 -14.35 -0.23 -3.06 16 15 N -0.71 2.00 5.26 -53.01 -0.28 1.72 16 16 C 0.12 -0.24 4.32 -67.11 -0.29 -0.53 16 17 H 0.11 -0.02 7.47 -51.93 -0.39 -0.40 16 18 C -0.13 0.41 7.29 -25.92 -0.19 0.22 16 19 C -0.08 0.17 3.79 -90.82 -0.34 -0.18 16 20 H 0.10 -0.24 7.45 -51.93 -0.39 -0.62 16 21 C -0.11 0.07 5.30 -104.56 -0.55 -0.48 16 22 C 0.10 0.06 7.25 -39.42 -0.29 -0.23 16 23 F -0.14 -0.21 16.37 2.25 0.04 -0.17 16 24 C -0.15 0.04 10.03 -39.51 -0.40 -0.36 16 25 C -0.09 0.12 10.04 -39.59 -0.40 -0.28 16 26 C -0.13 0.20 10.04 -39.58 -0.40 -0.20 16 27 C -0.09 0.14 8.63 -39.59 -0.34 -0.21 16 28 C -0.14 0.29 7.26 -25.78 -0.19 0.10 16 29 C -0.21 0.73 9.04 -39.43 -0.36 0.37 16 30 C -0.03 0.10 8.66 -39.61 -0.34 -0.24 16 31 H 0.38 -2.16 8.70 45.56 0.40 -1.76 16 32 H 0.12 -0.26 7.96 -51.93 -0.41 -0.67 16 33 H -0.25 0.01 7.11 56.52 0.40 0.41 16 34 H -0.25 0.50 7.11 56.52 0.40 0.90 16 35 H 0.16 0.09 7.61 -52.49 -0.40 -0.31 16 36 H 0.10 -0.60 7.66 -51.93 -0.40 -1.00 16 37 H 0.10 -0.64 7.66 -51.93 -0.40 -1.04 16 38 H 0.40 -2.39 8.70 -40.82 -0.36 -2.74 16 39 H 0.10 -0.33 7.73 -51.93 -0.40 -0.74 16 40 H 0.08 -0.28 8.14 -51.93 -0.42 -0.71 16 41 H 0.14 -0.21 8.06 -52.49 -0.42 -0.63 16 42 H 0.13 -0.42 8.06 -52.49 -0.42 -0.84 16 43 H 0.13 -0.44 8.06 -52.49 -0.42 -0.86 16 44 H 0.13 -0.43 6.65 -52.49 -0.35 -0.78 16 45 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 46 H 0.10 -0.24 6.31 -51.93 -0.33 -0.57 16 47 H 0.16 -1.11 6.30 -52.48 -0.33 -1.44 16 48 H 0.15 -0.99 4.87 -52.49 -0.26 -1.24 16 LS Contribution 413.49 15.07 6.23 6.23 Total: 0.00 -13.09 413.49 -12.09 -25.18 By element: Atomic # 1 Polarization: -10.24 SS G_CDS: -5.32 Total: -15.56 kcal Atomic # 6 Polarization: 2.51 SS G_CDS: -5.61 Total: -3.10 kcal Atomic # 7 Polarization: 2.18 SS G_CDS: -0.13 Total: 2.06 kcal Atomic # 8 Polarization: -4.70 SS G_CDS: -2.24 Total: -6.93 kcal Atomic # 9 Polarization: -0.21 SS G_CDS: 0.04 Total: -0.17 kcal Atomic # 14 Polarization: -2.65 SS G_CDS: -5.06 Total: -7.71 kcal Total LS contribution 6.23 Total: 6.23 kcal Total: -13.09 -12.09 -25.18 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705094_4549638.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -28.581 kcal (2) G-P(sol) polarization free energy of solvation -13.094 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -41.676 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.090 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.185 kcal (6) G-S(sol) free energy of system = (1) + (5) -53.766 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds