Wall clock time and date at job start Tue Mar 9 2021 13:41:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86308 * 109.47105 * 2 1 4 4 C 1.50696 * 109.47469 * 239.99928 * 2 1 3 5 5 C 1.38251 * 119.94042 * 299.97466 * 4 2 1 6 6 C 1.38173 * 120.04969 * 179.76499 * 5 4 2 7 7 N 1.48005 * 120.02104 * 180.25559 * 6 5 4 8 8 O 1.21793 * 120.00352 * 0.28173 * 7 6 5 9 9 O 1.21809 * 119.99562 * 180.27693 * 7 6 5 10 10 C 1.38705 * 119.94516 * 0.53500 * 6 5 4 11 11 O 1.35901 * 120.05442 * 179.74138 * 10 6 5 12 12 C 1.42901 * 116.99924 * 179.72069 * 11 10 6 13 13 C 1.50705 * 109.46987 * 180.02562 * 12 11 10 14 14 O 1.21275 * 119.99947 * 0.02562 * 13 12 11 15 15 N 1.34776 * 119.99715 * 180.02562 * 13 12 11 16 16 C 1.46505 * 119.99597 * 180.02562 * 15 13 12 17 17 H 1.08998 * 112.91090 * 23.74977 * 16 15 13 18 18 C 1.53781 * 113.61334 * 154.99978 * 16 15 13 19 19 C 1.53786 * 87.17350 * 89.07333 * 18 16 15 20 20 H 1.09000 * 113.60973 * 270.92699 * 19 18 16 21 21 C 1.50690 * 113.61518 * 140.02616 * 19 18 16 22 22 C 1.38434 * 120.01739 * 119.99865 * 21 19 18 23 23 F 1.35106 * 120.02287 * 359.97438 * 22 21 19 24 24 C 1.38483 * 119.95471 * 179.97438 * 22 21 19 25 25 C 1.38179 * 119.96798 * 359.97438 * 24 22 21 26 26 C 1.38265 * 120.02826 * 0.02562 * 25 24 22 27 27 C 1.38224 * 120.05180 * 359.71776 * 26 25 24 28 28 C 1.53781 * 113.61146 * 252.49455 * 16 15 13 29 29 C 1.38750 * 119.89007 * 359.47191 * 10 6 5 30 30 C 1.38127 * 119.94373 * 0.24606 * 29 10 6 31 31 H 0.96706 * 114.00270 * 60.00300 * 1 2 3 32 32 H 1.08999 * 109.47172 * 119.99388 * 2 1 3 33 33 H 1.48497 * 110.00018 * 59.99822 * 3 2 1 34 34 H 1.48497 * 109.99886 * 181.31869 * 3 2 1 35 35 H 1.07992 * 119.97237 * 0.02562 * 5 4 2 36 36 H 1.09000 * 109.46954 * 60.01071 * 12 11 10 37 37 H 1.08993 * 109.47307 * 300.00368 * 12 11 10 38 38 H 0.96995 * 120.00232 * 359.97438 * 15 13 12 39 39 H 1.09002 * 113.61445 * 203.66333 * 18 16 15 40 40 H 1.09002 * 113.61408 * 334.48063 * 18 16 15 41 41 H 1.07997 * 120.01768 * 179.97438 * 24 22 21 42 42 H 1.08002 * 119.98353 * 179.97438 * 25 24 22 43 43 H 1.07999 * 119.97504 * 180.02562 * 26 25 24 44 44 H 1.07998 * 119.98657 * 180.27854 * 27 26 25 45 45 H 1.09005 * 113.61471 * 25.43638 * 28 16 15 46 46 H 1.08996 * 113.61178 * 156.24980 * 28 16 15 47 47 H 1.08006 * 120.02776 * 180.23318 * 29 10 6 48 48 H 1.07998 * 119.97169 * 180.02562 * 30 29 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 1.5971 -2.0342 -1.4477 6 6 2.0525 -2.6863 -2.5775 7 7 1.6896 -4.1018 -2.8123 8 8 0.9851 -4.6907 -2.0122 9 8 2.0955 -4.6778 -3.8060 10 6 2.8547 -2.0150 -3.4884 11 8 3.3082 -2.6558 -4.5977 12 6 4.1246 -1.9006 -5.4950 13 6 4.5296 -2.7695 -6.6579 14 8 4.1555 -3.9217 -6.7130 15 7 5.3075 -2.2659 -7.6365 16 6 5.7007 -3.1104 -8.7672 17 1 5.0144 -3.9403 -8.9358 18 6 6.0331 -2.3173 -10.0421 19 6 7.4800 -2.2419 -9.5264 20 1 7.6729 -1.3765 -8.8924 21 6 8.5157 -2.4205 -10.6063 22 6 9.4322 -1.4144 -10.8599 23 9 9.3983 -0.2717 -10.1399 24 6 10.3839 -1.5801 -11.8522 25 6 10.4179 -2.7495 -12.5876 26 6 9.5021 -3.7536 -12.3334 27 6 8.5551 -3.5915 -11.3396 28 6 7.1797 -3.5304 -8.7373 29 6 3.1889 -0.6865 -3.2679 30 6 2.7263 -0.0373 -2.1399 31 1 -0.3934 0.4417 -0.7651 32 1 1.7923 -0.5137 0.8900 33 1 1.5614 2.4680 1.2084 34 1 3.5345 1.7703 -0.0321 35 1 0.9761 -2.5576 -0.7359 36 1 5.0160 -1.5549 -4.9716 37 1 3.5627 -1.0417 -5.8620 38 1 5.6063 -1.3442 -7.5926 39 1 5.9258 -2.8982 -10.9582 40 1 5.5373 -1.3480 -10.0951 41 1 11.0991 -0.7958 -12.0513 42 1 11.1598 -2.8788 -13.3618 43 1 9.5297 -4.6674 -12.9084 44 1 7.8431 -4.3783 -11.1389 45 1 7.6108 -3.5398 -7.7361 46 1 7.3856 -4.4437 -9.2953 47 1 3.8103 -0.1605 -3.9776 48 1 2.9858 0.9969 -1.9680 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705094_4549638.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:41:59 Heat of formation + Delta-G solvation = -54.700167 kcal Electronic energy + Delta-G solvation = -36560.167206 eV Core-core repulsion = 31273.545633 eV Total energy + Delta-G solvation = -5286.621573 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 403.136 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -49.90139 -43.29789 -41.86971 -41.37645 -40.33228 -39.47047 -38.64092 -37.59600 -37.36130 -34.75477 -33.48352 -32.28726 -31.93658 -31.42039 -29.78162 -27.82716 -26.73835 -26.68199 -26.11526 -24.24501 -23.72614 -22.91725 -22.64409 -21.94918 -20.55886 -20.21372 -19.77959 -19.14589 -18.85580 -18.64349 -18.39413 -18.11722 -17.60225 -17.44697 -17.27631 -16.86569 -16.74685 -16.62300 -16.32972 -16.11354 -15.77394 -15.67307 -15.33362 -15.23503 -15.03675 -14.75817 -14.63534 -14.18090 -14.05480 -13.98328 -13.83533 -13.72612 -13.47438 -13.23395 -13.03611 -13.02096 -12.70912 -12.39254 -12.36135 -12.27910 -12.25749 -12.19806 -11.95772 -11.90717 -11.75573 -11.25926 -11.05368 -10.84245 -10.56849 -10.19031 -9.87408 -9.79519 -9.56934 -5.00014 -1.31790 -0.24876 0.15291 0.18693 0.24994 0.34958 1.18420 1.26819 1.42417 1.63707 2.01761 2.04914 2.29293 2.60791 3.11397 3.23191 3.27205 3.38645 3.42136 3.49961 3.57863 3.59877 3.66896 3.70854 3.79330 3.83681 3.91571 3.92270 4.01892 4.10472 4.17735 4.28538 4.35368 4.36712 4.39032 4.50436 4.61751 4.62948 4.74154 4.81088 4.83526 4.87649 4.96313 4.99569 5.06857 5.08317 5.12342 5.18627 5.25140 5.38724 5.49383 5.56263 5.75123 5.95797 6.41113 6.42191 6.73119 7.12763 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.082 4.082 3 Si 0.799 3.201 4 C -0.150 4.150 5 C -0.004 4.004 6 C -0.104 4.104 7 N 0.034 4.966 8 O -0.204 6.204 9 O -0.172 6.172 10 C 0.194 3.806 11 O -0.291 6.291 12 C 0.024 3.976 13 C 0.511 3.489 14 O -0.563 6.563 15 N -0.692 5.692 16 C 0.118 3.882 17 H 0.088 0.912 18 C -0.120 4.120 19 C -0.071 4.071 20 H 0.105 0.895 21 C -0.111 4.111 22 C 0.075 3.925 23 F -0.149 7.149 24 C -0.164 4.164 25 C -0.100 4.100 26 C -0.130 4.130 27 C -0.096 4.096 28 C -0.140 4.140 29 C -0.188 4.188 30 C -0.005 4.005 31 H 0.398 0.602 32 H 0.110 0.890 33 H -0.306 1.306 34 H -0.264 1.264 35 H 0.150 0.850 36 H 0.142 0.858 37 H 0.148 0.852 38 H 0.421 0.579 39 H 0.104 0.896 40 H 0.090 0.910 41 H 0.142 0.858 42 H 0.151 0.849 43 H 0.149 0.851 44 H 0.148 0.852 45 H 0.068 0.932 46 H 0.101 0.899 47 H 0.206 0.794 48 H 0.189 0.811 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.026 12.568 -5.217 14.506 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.366 6.366 2 C -0.190 4.190 3 Si 0.703 3.297 4 C -0.151 4.151 5 C -0.023 4.023 6 C -0.190 4.190 7 N 0.544 4.456 8 O -0.411 6.411 9 O -0.387 6.387 10 C 0.144 3.856 11 O -0.201 6.201 12 C -0.052 4.052 13 C 0.297 3.703 14 O -0.439 6.439 15 N -0.347 5.347 16 C 0.012 3.988 17 H 0.106 0.894 18 C -0.158 4.158 19 C -0.089 4.089 20 H 0.123 0.877 21 C -0.112 4.112 22 C 0.056 3.944 23 F -0.128 7.128 24 C -0.183 4.183 25 C -0.118 4.118 26 C -0.148 4.148 27 C -0.114 4.114 28 C -0.179 4.179 29 C -0.207 4.207 30 C -0.023 4.023 31 H 0.248 0.752 32 H 0.127 0.873 33 H -0.234 1.234 34 H -0.190 1.190 35 H 0.167 0.833 36 H 0.160 0.840 37 H 0.165 0.835 38 H 0.260 0.740 39 H 0.123 0.877 40 H 0.109 0.891 41 H 0.160 0.840 42 H 0.168 0.832 43 H 0.167 0.833 44 H 0.166 0.834 45 H 0.087 0.913 46 H 0.119 0.881 47 H 0.223 0.777 48 H 0.205 0.795 Dipole moment (debyes) X Y Z Total from point charges 5.431 12.474 -4.221 14.245 hybrid contribution 0.063 -1.010 0.490 1.124 sum 5.494 11.464 -3.732 13.249 Atomic orbital electron populations 1.86529 1.17227 1.82218 1.50632 1.25470 0.85491 1.12038 0.96019 0.93802 0.77927 0.72561 0.85444 1.20456 1.02098 0.92663 0.99918 1.20837 0.94221 0.94781 0.92436 1.20862 1.13334 0.81619 1.03146 1.43900 0.98243 1.03974 0.99455 1.94503 1.35859 1.68385 1.42358 1.94679 1.56415 1.69249 1.18317 1.18961 0.89586 0.92076 0.84978 1.86469 1.63614 1.39721 1.30323 1.23121 0.98192 0.94552 0.89385 1.20498 0.78225 0.87679 0.83885 1.90849 1.55117 1.20130 1.77847 1.45321 1.51331 1.16405 1.21633 1.21813 0.96036 0.94571 0.86357 0.89420 1.23368 0.93673 1.01879 0.96894 1.21570 0.92849 0.99551 0.94906 0.87685 1.19889 0.97352 0.94169 0.99760 1.17851 0.98830 0.83384 0.94323 1.91451 1.96136 1.48408 1.76755 1.21417 0.99557 1.00563 0.96726 1.21356 0.99121 0.92240 0.99090 1.21576 0.95004 1.00197 0.97998 1.21197 0.99010 0.96465 0.94710 1.23613 0.95455 0.97903 1.00908 1.21815 1.06054 0.90449 1.02357 1.21724 0.89456 1.01201 0.89869 0.75179 0.87298 1.23407 1.19035 0.83263 0.84004 0.83496 0.74042 0.87733 0.89119 0.84050 0.83166 0.83345 0.83420 0.91327 0.88100 0.77684 0.79460 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 1.97 12.77 -148.98 -1.90 0.07 16 2 C -0.08 0.50 2.82 71.23 0.20 0.70 16 3 Si 0.80 -8.15 29.78 68.60 2.04 -6.11 16 4 C -0.15 0.86 5.39 -19.85 -0.11 0.76 16 5 C 0.00 -0.01 9.12 22.26 0.20 0.20 16 6 C -0.10 -0.72 6.87 36.47 0.25 -0.47 16 7 N 0.03 0.57 4.45 -46.24 -0.21 0.37 16 8 O -0.20 -3.84 18.45 18.89 0.35 -3.49 16 9 O -0.17 -3.72 17.24 25.60 0.44 -3.28 16 10 C 0.19 0.05 6.67 22.50 0.15 0.20 16 11 O -0.29 -1.19 7.68 -63.41 -0.49 -1.67 16 12 C 0.02 -0.19 5.22 71.24 0.37 0.18 16 13 C 0.51 0.27 7.91 87.66 0.69 0.96 16 14 O -0.56 -7.95 16.10 16.02 0.26 -7.70 16 15 N -0.69 4.40 5.26 -440.03 -2.32 2.08 16 16 C 0.12 -0.41 4.32 45.52 0.20 -0.21 16 17 H 0.09 0.16 7.47 -2.39 -0.02 0.14 16 18 C -0.12 0.82 7.29 31.12 0.23 1.04 16 19 C -0.07 0.34 3.79 -10.92 -0.04 0.30 16 20 H 0.11 -0.60 7.45 -2.39 -0.02 -0.61 16 21 C -0.11 0.17 5.30 -19.82 -0.10 0.06 16 22 C 0.08 0.10 7.25 22.38 0.16 0.26 16 23 F -0.15 -0.47 16.37 44.97 0.74 0.27 16 24 C -0.16 0.08 10.03 22.31 0.22 0.30 16 25 C -0.10 0.30 10.04 22.26 0.22 0.53 16 26 C -0.13 0.49 10.04 22.27 0.22 0.72 16 27 C -0.10 0.32 8.63 22.26 0.19 0.52 16 28 C -0.14 0.52 7.26 31.21 0.23 0.74 16 29 C -0.19 2.09 9.04 22.37 0.20 2.29 16 30 C -0.01 0.06 8.66 22.25 0.19 0.26 16 31 H 0.40 -4.88 8.70 -74.05 -0.64 -5.52 16 32 H 0.11 -0.45 7.96 -2.39 -0.02 -0.47 16 33 H -0.31 0.11 7.11 99.48 0.71 0.82 16 34 H -0.26 2.15 7.11 99.48 0.71 2.86 16 35 H 0.15 0.60 7.61 -2.91 -0.02 0.58 16 36 H 0.14 -2.28 7.66 -2.39 -0.02 -2.29 16 37 H 0.15 -2.48 7.66 -2.39 -0.02 -2.50 16 38 H 0.42 -5.96 8.70 -92.71 -0.81 -6.77 16 39 H 0.10 -0.73 7.73 -2.39 -0.02 -0.75 16 40 H 0.09 -0.79 8.14 -2.39 -0.02 -0.81 16 41 H 0.14 -0.40 8.06 -2.91 -0.02 -0.42 16 42 H 0.15 -1.09 8.06 -2.91 -0.02 -1.11 16 43 H 0.15 -1.17 8.06 -2.91 -0.02 -1.19 16 44 H 0.15 -1.01 6.65 -2.91 -0.02 -1.03 16 45 H 0.07 -0.13 8.14 -2.38 -0.02 -0.14 16 46 H 0.10 -0.43 6.31 -2.39 -0.02 -0.45 16 47 H 0.21 -4.34 6.30 -2.91 -0.02 -4.36 16 48 H 0.19 -3.66 4.87 -2.91 -0.01 -3.68 16 Total: 0.00 -40.08 413.49 2.26 -37.83 By element: Atomic # 1 Polarization: -27.37 SS G_CDS: -0.35 Total: -27.72 kcal Atomic # 6 Polarization: 5.66 SS G_CDS: 3.69 Total: 9.34 kcal Atomic # 7 Polarization: 4.97 SS G_CDS: -2.52 Total: 2.45 kcal Atomic # 8 Polarization: -14.72 SS G_CDS: -1.34 Total: -16.06 kcal Atomic # 9 Polarization: -0.47 SS G_CDS: 0.74 Total: 0.27 kcal Atomic # 14 Polarization: -8.15 SS G_CDS: 2.04 Total: -6.11 kcal Total: -40.08 2.26 -37.83 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705094_4549638.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -16.873 kcal (2) G-P(sol) polarization free energy of solvation -40.084 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -56.957 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.257 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.827 kcal (6) G-S(sol) free energy of system = (1) + (5) -54.700 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds