Wall clock time and date at job start Tue Mar 9 2021 13:42:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86301 * 109.47186 * 2 1 4 4 C 1.50701 * 109.47056 * 240.00489 * 2 1 3 5 5 C 1.38242 * 119.97367 * 119.99331 * 4 2 1 6 6 C 1.38295 * 120.11401 * 179.97438 * 5 4 2 7 7 C 1.38122 * 120.05026 * 0.02562 * 6 5 4 8 8 C 1.38753 * 119.94946 * 359.97438 * 7 6 5 9 9 O 1.35897 * 120.05719 * 180.02562 * 8 7 6 10 10 C 1.42904 * 116.99814 * 0.02562 * 9 8 7 11 11 C 1.50702 * 109.46665 * 180.02562 * 10 9 8 12 12 O 1.21277 * 120.00520 * 359.97438 * 11 10 9 13 13 N 1.34780 * 119.99534 * 180.02562 * 11 10 9 14 14 C 1.46504 * 119.99673 * 179.97438 * 13 11 10 15 15 H 1.09003 * 112.85133 * 23.79876 * 14 13 11 16 16 C 1.53780 * 113.61223 * 154.99802 * 14 13 11 17 17 C 1.53784 * 87.08089 * 89.11424 * 16 14 13 18 18 H 1.08993 * 113.61603 * 270.79518 * 17 16 14 19 19 C 1.50706 * 113.61201 * 139.97928 * 17 16 14 20 20 C 1.38435 * 120.01083 * 119.72588 * 19 17 16 21 21 F 1.35106 * 120.02592 * 359.97438 * 20 19 17 22 22 C 1.38484 * 119.94733 * 179.72438 * 20 19 17 23 23 C 1.38172 * 119.97368 * 0.57101 * 22 20 19 24 24 C 1.38271 * 120.02410 * 359.69937 * 23 22 20 25 25 C 1.38213 * 120.01417 * 299.99580 * 19 17 16 26 26 C 1.53779 * 87.08093 * 25.43417 * 17 16 14 27 27 C 1.38169 * 119.97176 * 299.97669 * 4 2 1 28 28 H 0.96705 * 113.99568 * 299.99297 * 1 2 3 29 29 H 1.08997 * 109.47706 * 120.00575 * 2 1 3 30 30 H 1.48500 * 110.00299 * 300.00582 * 3 2 1 31 31 H 1.48501 * 109.99693 * 61.32329 * 3 2 1 32 32 H 1.07997 * 119.94707 * 0.02562 * 5 4 2 33 33 H 1.07997 * 119.97026 * 179.74858 * 6 5 4 34 34 H 1.08002 * 120.02294 * 179.97438 * 7 6 5 35 35 H 1.09003 * 109.47156 * 299.99662 * 10 9 8 36 36 H 1.09000 * 109.47372 * 59.99966 * 10 9 8 37 37 H 0.96999 * 120.00180 * 359.97438 * 13 11 10 38 38 H 1.09005 * 113.61016 * 203.65922 * 16 14 13 39 39 H 1.08997 * 113.61534 * 334.56476 * 16 14 13 40 40 H 1.08000 * 120.01375 * 180.29246 * 22 20 19 41 41 H 1.08001 * 119.98866 * 179.72436 * 23 22 20 42 42 H 1.07999 * 119.97399 * 180.02562 * 24 23 22 43 43 H 1.08008 * 119.98547 * 359.96344 * 25 19 17 44 44 H 1.09009 * 113.61273 * 220.02312 * 26 17 16 45 45 H 1.08997 * 113.61974 * 89.11844 * 26 17 16 46 46 H 1.07997 * 120.02694 * 359.97438 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 2.7259 -0.0378 -2.1402 6 6 3.1889 -0.6870 -3.2701 7 6 2.8577 -2.0093 -3.4926 8 6 2.0603 -2.6866 -2.5812 9 8 1.7336 -3.9878 -2.7977 10 6 2.2464 -4.5966 -3.9845 11 6 1.7829 -6.0289 -4.0548 12 8 1.0829 -6.4836 -3.1750 13 7 2.1472 -6.8047 -5.0949 14 6 1.6971 -8.1973 -5.1630 15 1 0.7864 -8.3762 -4.5913 16 6 1.6470 -8.7592 -6.5935 17 6 3.1107 -9.1862 -6.3930 18 1 3.8319 -8.4211 -6.6800 19 6 3.4299 -10.5391 -6.9750 20 6 4.3939 -10.6586 -7.9614 21 9 5.0485 -9.5624 -8.4032 22 6 4.6902 -11.9033 -8.4912 23 6 4.0154 -13.0227 -8.0433 24 6 3.0489 -12.9013 -7.0620 25 6 2.7566 -11.6604 -6.5281 26 6 2.8121 -9.2193 -4.8848 27 6 1.5975 -2.0333 -1.4485 28 1 -0.3933 0.4416 0.7652 29 1 1.7924 -0.5139 0.8899 30 1 1.5614 2.4680 -1.2084 31 1 1.5879 2.4585 1.2243 32 1 2.9862 0.9960 -1.9678 33 1 3.8061 -0.1582 -3.9813 34 1 3.2192 -2.5158 -4.3754 35 1 1.8828 -4.0542 -4.8573 36 1 3.3358 -4.5673 -3.9664 37 1 2.7074 -6.4411 -5.7984 38 1 0.9597 -9.5972 -6.7096 39 1 1.5163 -7.9941 -7.3588 40 1 5.4454 -11.9984 -9.2574 41 1 4.2432 -13.9929 -8.4595 42 1 2.5222 -13.7769 -6.7122 43 1 2.0018 -11.5668 -5.7612 44 1 3.6220 -8.8255 -4.2706 45 1 2.4433 -10.1830 -4.5337 46 1 0.9773 -2.5584 -0.7372 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705094_4860298.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:42:17 Heat of formation + Delta-G solvation = -59.464077 kcal Electronic energy + Delta-G solvation = -29845.838351 eV Core-core repulsion = 25390.026635 eV Total energy + Delta-G solvation = -4455.811716 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.141 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -49.86791 -41.76254 -41.22148 -40.20952 -39.12727 -38.51088 -37.34069 -34.73541 -32.57988 -32.17047 -31.56691 -31.44085 -29.28689 -26.89022 -26.84042 -26.21342 -23.93552 -23.62332 -22.99625 -22.48593 -21.57710 -20.30245 -19.22626 -18.81179 -18.51408 -18.19975 -17.56553 -17.43106 -17.39198 -17.14204 -16.78819 -16.67133 -16.59229 -15.82806 -15.75646 -15.56450 -15.29249 -15.16829 -15.10986 -14.59518 -14.53003 -14.18822 -14.02831 -14.00570 -13.72981 -13.66924 -13.55091 -13.31013 -13.15396 -13.07774 -12.49294 -12.46346 -12.16201 -12.03117 -11.99194 -11.87522 -11.66995 -11.36570 -10.92472 -10.54780 -10.22873 -9.96448 -9.85787 -9.63731 -9.22907 -4.95734 0.10846 0.16376 0.23422 0.44529 1.25018 1.42353 1.44813 1.60744 1.96313 2.51154 2.52315 2.65941 3.19017 3.30059 3.32765 3.42555 3.47972 3.54759 3.70208 3.74760 3.79020 3.79667 3.90604 3.90819 3.94837 4.02593 4.06465 4.22110 4.23613 4.26400 4.27952 4.50405 4.53944 4.56640 4.62210 4.69429 4.74463 4.82862 4.86860 4.96430 5.00600 5.01110 5.14767 5.25702 5.28480 5.38039 5.38237 5.45487 5.49870 5.66961 5.85601 6.22744 6.38096 6.44623 7.05983 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.079 4.079 3 Si 0.687 3.313 4 C -0.034 4.034 5 C -0.151 4.151 6 C -0.072 4.072 7 C -0.206 4.206 8 C 0.128 3.872 9 O -0.288 6.288 10 C 0.041 3.959 11 C 0.519 3.481 12 O -0.509 6.509 13 N -0.711 5.711 14 C 0.122 3.878 15 H 0.109 0.891 16 C -0.133 4.133 17 C -0.076 4.076 18 H 0.101 0.899 19 C -0.105 4.105 20 C 0.100 3.900 21 F -0.139 7.139 22 C -0.152 4.152 23 C -0.094 4.094 24 C -0.126 4.126 25 C -0.090 4.090 26 C -0.142 4.142 27 C -0.119 4.119 28 H 0.381 0.619 29 H 0.080 0.920 30 H -0.255 1.255 31 H -0.261 1.261 32 H 0.130 0.870 33 H 0.132 0.868 34 H 0.130 0.870 35 H 0.095 0.905 36 H 0.096 0.904 37 H 0.403 0.597 38 H 0.101 0.899 39 H 0.079 0.921 40 H 0.135 0.865 41 H 0.133 0.867 42 H 0.131 0.869 43 H 0.134 0.866 44 H 0.077 0.923 45 H 0.098 0.902 46 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.035 -0.858 -2.483 4.814 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.188 4.188 3 Si 0.588 3.412 4 C -0.034 4.034 5 C -0.169 4.169 6 C -0.090 4.090 7 C -0.225 4.225 8 C 0.083 3.917 9 O -0.201 6.201 10 C -0.038 4.038 11 C 0.304 3.696 12 O -0.382 6.382 13 N -0.365 5.365 14 C 0.017 3.983 15 H 0.127 0.873 16 C -0.171 4.171 17 C -0.094 4.094 18 H 0.120 0.880 19 C -0.106 4.106 20 C 0.080 3.920 21 F -0.117 7.117 22 C -0.171 4.171 23 C -0.112 4.112 24 C -0.144 4.144 25 C -0.108 4.108 26 C -0.180 4.180 27 C -0.138 4.138 28 H 0.229 0.771 29 H 0.097 0.903 30 H -0.179 1.179 31 H -0.186 1.186 32 H 0.147 0.853 33 H 0.150 0.850 34 H 0.148 0.852 35 H 0.113 0.887 36 H 0.114 0.886 37 H 0.238 0.762 38 H 0.120 0.880 39 H 0.098 0.902 40 H 0.153 0.847 41 H 0.151 0.849 42 H 0.149 0.851 43 H 0.152 0.848 44 H 0.096 0.904 45 H 0.116 0.884 46 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 3.288 -0.737 -2.270 4.063 hybrid contribution -0.429 0.138 -0.280 0.531 sum 2.859 -0.600 -2.550 3.877 Atomic orbital electron populations 1.86601 1.17575 1.80228 1.49764 1.24859 0.84689 1.11134 0.98147 0.95008 0.91664 0.74265 0.80286 1.19038 0.96495 0.92920 0.94927 1.20876 1.00954 0.99869 0.95173 1.20877 0.97947 0.93611 0.96587 1.21286 1.03644 0.96660 1.00928 1.19002 0.94931 0.82968 0.94781 1.86166 1.70418 1.22570 1.40915 1.22451 1.00291 0.92058 0.89010 1.20045 0.80565 0.86924 0.82069 1.90788 1.35805 1.74233 1.37395 1.45485 1.54154 1.11726 1.25128 1.21854 0.98642 0.79982 0.97857 0.87279 1.23437 0.95883 1.01516 0.96309 1.21556 0.97706 0.93838 0.96341 0.88041 1.19724 0.97198 0.96401 0.97287 1.17590 0.94426 0.83183 0.96760 1.91490 1.79603 1.52379 1.88258 1.21208 1.02328 0.91328 1.02204 1.21080 0.95324 0.98357 0.96443 1.21261 0.98245 0.97788 0.97139 1.20942 0.99043 0.91367 0.99446 1.23578 0.99264 1.00173 0.95026 1.20235 1.02428 0.94004 0.97087 0.77126 0.90255 1.17926 1.18620 0.85279 0.84965 0.85202 0.88688 0.88619 0.76206 0.88049 0.90243 0.84671 0.84906 0.85128 0.84845 0.90446 0.88355 0.84741 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.09 12.74 -35.23 -0.45 -1.54 16 2 C -0.08 -0.05 2.81 36.01 0.10 0.05 16 3 Si 0.69 -0.45 29.79 -169.99 -5.06 -5.51 16 4 C -0.03 -0.07 5.42 -104.65 -0.57 -0.64 16 5 C -0.15 -0.10 8.67 -39.56 -0.34 -0.45 16 6 C -0.07 0.01 10.04 -39.60 -0.40 -0.39 16 7 C -0.21 -0.07 9.04 -39.43 -0.36 -0.42 16 8 C 0.13 0.35 6.69 -39.22 -0.26 0.09 16 9 O -0.29 -1.03 9.67 -39.33 -0.38 -1.41 16 10 C 0.04 -0.02 5.22 36.01 0.19 0.17 16 11 C 0.52 0.80 7.91 -10.98 -0.09 0.71 16 12 O -0.51 -3.32 16.10 -14.35 -0.23 -3.56 16 13 N -0.71 1.11 5.26 -53.01 -0.28 0.84 16 14 C 0.12 -0.14 4.32 -67.11 -0.29 -0.43 16 15 H 0.11 0.06 7.46 -51.93 -0.39 -0.33 16 16 C -0.13 0.31 7.29 -25.92 -0.19 0.12 16 17 C -0.08 0.12 3.78 -90.96 -0.34 -0.23 16 18 H 0.10 -0.16 7.45 -51.93 -0.39 -0.55 16 19 C -0.11 0.02 5.29 -104.56 -0.55 -0.53 16 20 C 0.10 0.10 7.25 -39.42 -0.29 -0.18 16 21 F -0.14 -0.28 16.37 2.25 0.04 -0.24 16 22 C -0.15 -0.01 10.03 -39.51 -0.40 -0.41 16 23 C -0.09 0.09 10.04 -39.59 -0.40 -0.31 16 24 C -0.13 0.16 10.04 -39.58 -0.40 -0.24 16 25 C -0.09 0.10 8.61 -39.60 -0.34 -0.24 16 26 C -0.14 0.21 7.25 -25.92 -0.19 0.02 16 27 C -0.12 -0.40 9.55 -39.43 -0.38 -0.78 16 28 H 0.38 -0.80 8.74 45.56 0.40 -0.40 16 29 H 0.08 -0.08 7.96 -51.93 -0.41 -0.49 16 30 H -0.25 -0.62 7.11 56.52 0.40 -0.22 16 31 H -0.26 -0.34 7.11 56.52 0.40 0.06 16 32 H 0.13 -0.16 4.87 -52.49 -0.26 -0.42 16 33 H 0.13 -0.35 8.06 -52.49 -0.42 -0.78 16 34 H 0.13 -0.33 6.30 -52.49 -0.33 -0.66 16 35 H 0.10 -0.28 7.66 -51.93 -0.40 -0.68 16 36 H 0.10 -0.31 7.66 -51.93 -0.40 -0.71 16 37 H 0.40 -1.80 8.70 -40.82 -0.36 -2.15 16 38 H 0.10 -0.27 7.72 -51.93 -0.40 -0.67 16 39 H 0.08 -0.21 8.14 -51.93 -0.42 -0.64 16 40 H 0.14 -0.16 8.06 -52.49 -0.42 -0.59 16 41 H 0.13 -0.39 8.06 -52.49 -0.42 -0.81 16 42 H 0.13 -0.41 8.06 -52.49 -0.42 -0.83 16 43 H 0.13 -0.38 6.66 -52.48 -0.35 -0.73 16 44 H 0.08 -0.05 8.14 -51.92 -0.42 -0.47 16 45 H 0.10 -0.20 6.31 -51.93 -0.33 -0.53 16 46 H 0.13 0.51 8.06 -52.49 -0.42 0.08 16 LS Contribution 387.48 15.07 5.84 5.84 Total: 0.00 -10.38 387.48 -11.77 -22.15 By element: Atomic # 1 Polarization: -6.75 SS G_CDS: -5.76 Total: -12.51 kcal Atomic # 6 Polarization: 1.42 SS G_CDS: -5.48 Total: -4.06 kcal Atomic # 7 Polarization: 1.11 SS G_CDS: -0.28 Total: 0.84 kcal Atomic # 8 Polarization: -5.44 SS G_CDS: -1.06 Total: -6.50 kcal Atomic # 9 Polarization: -0.28 SS G_CDS: 0.04 Total: -0.24 kcal Atomic # 14 Polarization: -0.45 SS G_CDS: -5.06 Total: -5.51 kcal Total LS contribution 5.84 Total: 5.84 kcal Total: -10.38 -11.77 -22.15 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705094_4860298.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -37.310 kcal (2) G-P(sol) polarization free energy of solvation -10.383 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -47.692 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.772 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.154 kcal (6) G-S(sol) free energy of system = (1) + (5) -59.464 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds