Wall clock time and date at job start Tue Mar 9 2021 13:42:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46493 * 1 3 3 C 1.37641 * 125.67567 * 2 1 4 4 C 1.46673 * 126.22573 * 359.97438 * 3 2 1 5 5 O 1.21694 * 120.00204 * 5.76811 * 4 3 2 6 6 N 1.34781 * 120.00196 * 185.76776 * 4 3 2 7 7 C 1.46496 * 120.00418 * 175.06053 * 6 4 3 8 8 H 1.09006 * 112.84769 * 23.79754 * 7 6 4 9 9 C 1.53774 * 113.62039 * 154.99833 * 7 6 4 10 10 C 1.53778 * 87.08385 * 89.11196 * 9 7 6 11 11 H 1.08995 * 113.61788 * 270.88960 * 10 9 7 12 12 C 1.50695 * 113.61367 * 139.98139 * 10 9 7 13 13 C 1.38443 * 120.01370 * 119.73022 * 12 10 9 14 14 F 1.35104 * 120.02228 * 359.97438 * 13 12 10 15 15 C 1.38476 * 119.95035 * 179.72665 * 13 12 10 16 16 C 1.38176 * 119.97403 * 0.57041 * 15 13 12 17 17 C 1.38272 * 120.02623 * 359.69911 * 16 15 13 18 18 C 1.38217 * 120.01641 * 300.00068 * 12 10 9 19 19 C 1.53780 * 113.61381 * 252.49744 * 7 6 4 20 20 C 1.37888 * 107.55157 * 180.29335 * 3 2 1 21 21 C 1.39875 * 107.08768 * 359.73753 * 20 3 2 22 22 Br 1.89103 * 126.07325 * 180.02562 * 21 20 3 23 23 C 1.35502 * 107.85491 * 0.02562 * 21 20 3 24 24 C 1.50707 * 125.57133 * 179.97438 * 23 21 20 25 25 O 1.42899 * 109.46850 * 306.94241 * 24 23 21 26 26 Si 1.86290 * 109.47192 * 66.94316 * 24 23 21 27 27 H 1.09005 * 109.47457 * 275.63001 * 1 2 3 28 28 H 1.09000 * 109.47586 * 35.62750 * 1 2 3 29 29 H 1.09000 * 109.47016 * 155.62958 * 1 2 3 30 30 H 0.97001 * 119.99773 * 355.05361 * 6 4 3 31 31 H 1.08994 * 113.61687 * 203.66549 * 9 7 6 32 32 H 1.09004 * 113.61269 * 334.56457 * 9 7 6 33 33 H 1.08002 * 120.01533 * 180.28614 * 15 13 12 34 34 H 1.08004 * 119.99280 * 179.72588 * 16 15 13 35 35 H 1.08002 * 119.97935 * 180.02562 * 17 16 15 36 36 H 1.08011 * 119.98549 * 359.96100 * 18 12 10 37 37 H 1.08997 * 113.61471 * 25.42668 * 19 7 6 38 38 H 1.08996 * 113.61734 * 156.32814 * 19 7 6 39 39 H 1.08002 * 126.45610 * 179.72405 * 20 3 2 40 40 H 1.08995 * 109.46896 * 186.94881 * 24 23 21 41 41 H 0.96700 * 114.00090 * 179.97438 * 25 24 23 42 42 H 1.48510 * 110.00187 * 303.27448 * 26 24 23 43 43 H 1.48502 * 110.00040 * 64.59314 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.2677 1.1181 0.0000 4 6 1.8120 2.5123 -0.0005 5 8 0.6263 2.7650 0.1049 6 7 2.7065 3.5136 -0.1178 7 6 2.2446 4.8995 -0.2272 8 1 1.2519 5.0496 0.1974 9 6 3.2798 5.9332 0.2464 10 6 3.8149 5.9415 -1.1953 11 1 4.5879 5.1953 -1.3785 12 6 4.1947 7.3133 -1.6903 13 6 5.4970 7.5720 -2.0824 14 9 6.4282 6.5950 -2.0209 15 6 5.8433 8.8313 -2.5424 16 6 4.8916 9.8316 -2.5985 17 6 3.5925 9.5737 -2.2013 18 6 3.2444 8.3152 -1.7478 19 6 2.4107 5.4948 -1.6354 20 6 3.5781 0.6892 -0.0067 21 6 3.5528 -0.7093 -0.0047 22 35 5.0609 -1.8503 -0.0109 23 6 2.2558 -1.1014 0.0025 24 6 1.7713 -2.5285 0.0064 25 8 2.3793 -3.2408 -1.0729 26 14 2.2315 -3.3361 1.6208 27 1 -0.3634 0.1008 1.0227 28 1 -0.3634 0.8353 -0.5986 29 1 -0.3633 -0.9361 -0.4241 30 1 3.6562 3.3166 -0.1296 31 1 2.8403 6.8818 0.5545 32 1 3.9898 5.5387 0.9734 33 1 6.8579 9.0330 -2.8529 34 1 5.1624 10.8152 -2.9530 35 1 2.8492 10.3559 -2.2459 36 1 2.2291 8.1147 -1.4384 37 1 2.4190 4.7463 -2.4276 38 1 1.7335 6.3235 -1.8418 39 1 4.4582 1.3151 -0.0127 40 1 0.6879 -2.5447 -0.1122 41 1 2.1129 -4.1685 -1.1315 42 1 3.6991 -3.2503 1.8316 43 1 1.5178 -2.6734 2.7419 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705094_5000100.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:42:31 Heat of formation + Delta-G solvation = 5.146632 kcal Electronic energy + Delta-G solvation = -29654.817180 eV Core-core repulsion = 25243.471613 eV Total energy + Delta-G solvation = -4411.345567 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 409.048 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -49.93538 -42.95453 -41.46721 -40.09388 -38.75502 -37.66512 -35.19746 -34.28354 -32.49597 -31.67529 -31.42312 -30.92299 -27.47651 -27.40777 -26.79461 -25.95777 -23.93031 -23.38732 -22.68959 -21.72580 -20.55327 -20.10836 -19.07926 -18.64128 -18.47142 -17.61677 -17.38942 -17.13064 -16.83501 -16.76150 -16.65247 -15.99399 -15.67661 -15.54542 -15.29116 -15.07167 -14.91405 -14.76777 -14.57635 -14.39376 -14.16756 -13.99638 -13.94495 -13.75100 -13.52206 -13.29339 -13.07181 -13.05033 -12.86206 -12.39745 -12.38724 -11.96872 -11.82086 -11.75945 -11.37514 -11.29094 -10.89247 -10.61965 -10.29405 -9.90495 -9.89107 -9.59544 -9.33600 -5.04977 0.02703 0.16576 0.23151 0.57065 0.89073 1.15475 1.51824 1.65659 2.00978 2.07009 2.14076 2.58965 3.14044 3.24413 3.36370 3.41496 3.54969 3.59843 3.63008 3.70959 3.79996 3.89122 3.94085 4.07172 4.11656 4.14554 4.20295 4.29708 4.34157 4.36898 4.51471 4.54196 4.60593 4.69486 4.76533 4.81744 4.92630 4.96320 5.03005 5.09545 5.17078 5.23451 5.34732 5.45746 5.47326 5.51948 5.70479 5.93862 6.25731 6.87610 6.90748 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.060 3.940 2 N -0.399 5.399 3 C -0.051 4.051 4 C 0.596 3.404 5 O -0.569 6.569 6 N -0.689 5.689 7 C 0.120 3.880 8 H 0.101 0.899 9 C -0.122 4.122 10 C -0.075 4.075 11 H 0.095 0.905 12 C -0.111 4.111 13 C 0.071 3.929 14 F -0.152 7.152 15 C -0.164 4.164 16 C -0.099 4.099 17 C -0.127 4.127 18 C -0.094 4.094 19 C -0.136 4.136 20 C -0.111 4.111 21 C -0.181 4.181 22 Br -0.012 7.012 23 C 0.079 3.921 24 C -0.053 4.053 25 O -0.546 6.546 26 Si 0.766 3.234 27 H 0.088 0.912 28 H 0.095 0.905 29 H 0.115 0.885 30 H 0.414 0.586 31 H 0.113 0.887 32 H 0.082 0.918 33 H 0.140 0.860 34 H 0.152 0.848 35 H 0.153 0.847 36 H 0.153 0.847 37 H 0.066 0.934 38 H 0.111 0.889 39 H 0.175 0.825 40 H 0.098 0.902 41 H 0.409 0.591 42 H -0.254 1.254 43 H -0.304 1.304 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.148 0.013 -0.083 3.150 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 N -0.073 5.073 3 C -0.165 4.165 4 C 0.384 3.616 5 O -0.450 6.450 6 N -0.340 5.340 7 C 0.015 3.985 8 H 0.119 0.881 9 C -0.160 4.160 10 C -0.093 4.093 11 H 0.113 0.887 12 C -0.112 4.112 13 C 0.052 3.948 14 F -0.131 7.131 15 C -0.183 4.183 16 C -0.117 4.117 17 C -0.145 4.145 18 C -0.111 4.111 19 C -0.174 4.174 20 C -0.138 4.138 21 C -0.267 4.267 22 Br 0.072 6.928 23 C -0.042 4.042 24 C -0.162 4.162 25 O -0.356 6.356 26 Si 0.667 3.333 27 H 0.106 0.894 28 H 0.113 0.887 29 H 0.133 0.867 30 H 0.251 0.749 31 H 0.131 0.869 32 H 0.101 0.899 33 H 0.158 0.842 34 H 0.170 0.830 35 H 0.170 0.830 36 H 0.170 0.830 37 H 0.084 0.916 38 H 0.129 0.871 39 H 0.193 0.807 40 H 0.116 0.884 41 H 0.261 0.739 42 H -0.179 1.179 43 H -0.232 1.232 Dipole moment (debyes) X Y Z Total from point charges -3.160 0.450 0.632 3.254 hybrid contribution 0.457 0.579 -0.380 0.830 sum -2.703 1.029 0.252 2.903 Atomic orbital electron populations 1.22523 0.73899 1.06354 1.05186 1.43946 1.07983 1.03787 1.51611 1.20107 0.90124 0.87917 1.18319 1.16852 0.85463 0.83482 0.75784 1.90805 1.17305 1.84995 1.51863 1.45249 1.10034 1.05434 1.73301 1.21912 0.99619 0.79435 0.97560 0.88062 1.23402 0.97552 0.99644 0.95396 1.21511 0.97718 0.92996 0.97082 0.88708 1.19879 0.91849 0.97455 1.02003 1.17934 0.86729 0.86421 1.03734 1.91452 1.65143 1.61995 1.94492 1.21413 1.02208 0.92040 1.02631 1.21372 0.92815 0.99546 0.97985 1.21597 0.97018 0.97572 0.98347 1.21206 0.99818 0.91991 0.98124 1.23572 0.95929 1.01224 0.96699 1.21534 0.95748 0.93135 1.03431 1.21020 0.92124 0.94846 1.18695 1.96626 1.34911 1.63210 1.98047 1.20121 0.89268 0.89372 1.05430 1.24305 1.00607 0.87810 1.03480 1.86505 1.70894 1.29059 1.49142 0.95013 0.80414 0.86927 0.70901 0.89390 0.88680 0.86677 0.74890 0.86853 0.89910 0.84174 0.83013 0.82973 0.82967 0.91557 0.87074 0.80747 0.88389 0.73897 1.17877 1.23241 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.03 10.15 127.77 1.30 1.33 16 2 N -0.40 -2.24 3.16 -519.61 -1.64 -3.88 16 3 C -0.05 -0.32 6.88 40.35 0.28 -0.04 16 4 C 0.60 3.75 7.77 86.44 0.67 4.43 16 5 O -0.57 -6.52 14.47 -4.33 -0.06 -6.58 16 6 N -0.69 -0.35 5.25 -444.01 -2.33 -2.68 16 7 C 0.12 -0.13 4.35 45.52 0.20 0.06 16 8 H 0.10 0.13 7.42 -2.38 -0.02 0.12 16 9 C -0.12 0.47 7.29 31.12 0.23 0.69 16 10 C -0.07 0.11 3.78 -11.01 -0.04 0.07 16 11 H 0.09 -0.01 7.46 -2.39 -0.02 -0.03 16 12 C -0.11 -0.07 5.29 -19.82 -0.10 -0.18 16 13 C 0.07 0.29 7.25 22.38 0.16 0.45 16 14 F -0.15 -1.08 16.37 44.97 0.74 -0.35 16 15 C -0.16 -0.25 10.03 22.31 0.22 -0.02 16 16 C -0.10 0.20 10.04 22.26 0.22 0.42 16 17 C -0.13 0.43 10.04 22.27 0.22 0.65 16 18 C -0.09 0.25 8.61 22.26 0.19 0.44 16 19 C -0.14 0.27 7.25 31.12 0.23 0.50 16 20 C -0.11 -0.56 10.34 22.58 0.23 -0.33 16 21 C -0.18 -1.34 6.11 22.03 0.13 -1.20 16 22 Br -0.01 -0.08 30.62 -20.37 -0.62 -0.71 16 23 C 0.08 0.44 5.29 41.35 0.22 0.66 16 24 C -0.05 0.06 2.74 71.24 0.19 0.26 16 25 O -0.55 0.93 12.05 -148.98 -1.80 -0.86 16 26 Si 0.77 -1.29 31.63 68.60 2.17 0.88 16 27 H 0.09 -0.03 8.14 -2.38 -0.02 -0.05 16 28 H 0.09 0.28 6.79 -2.39 -0.02 0.26 16 29 H 0.11 -0.61 6.67 -2.39 -0.02 -0.63 16 30 H 0.41 -1.36 7.60 -92.71 -0.70 -2.06 16 31 H 0.11 -0.66 7.72 -2.39 -0.02 -0.68 16 32 H 0.08 -0.33 8.14 -2.38 -0.02 -0.35 16 33 H 0.14 -0.09 8.06 -2.91 -0.02 -0.12 16 34 H 0.15 -0.99 8.06 -2.91 -0.02 -1.01 16 35 H 0.15 -1.22 8.06 -2.91 -0.02 -1.25 16 36 H 0.15 -1.08 6.66 -2.91 -0.02 -1.10 16 37 H 0.07 0.04 8.14 -2.39 -0.02 0.02 16 38 H 0.11 -0.51 6.31 -2.39 -0.02 -0.53 16 39 H 0.18 -0.07 7.45 -2.91 -0.02 -0.10 16 40 H 0.10 -0.63 6.33 -2.39 -0.02 -0.65 16 41 H 0.41 -5.10 8.74 -74.06 -0.65 -5.75 16 42 H -0.25 -1.10 5.89 99.48 0.59 -0.52 16 43 H -0.30 -1.68 7.11 99.48 0.71 -0.97 16 Total: 0.00 -22.03 377.50 0.66 -21.36 By element: Atomic # 1 Polarization: -15.03 SS G_CDS: -0.35 Total: -15.37 kcal Atomic # 6 Polarization: 3.64 SS G_CDS: 4.56 Total: 8.19 kcal Atomic # 7 Polarization: -2.59 SS G_CDS: -3.97 Total: -6.56 kcal Atomic # 8 Polarization: -5.59 SS G_CDS: -1.86 Total: -7.45 kcal Atomic # 9 Polarization: -1.08 SS G_CDS: 0.74 Total: -0.35 kcal Atomic # 14 Polarization: -1.29 SS G_CDS: 2.17 Total: 0.88 kcal Atomic # 35 Polarization: -0.08 SS G_CDS: -0.62 Total: -0.71 kcal Total: -22.03 0.66 -21.36 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705094_5000100.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 26.511 kcal (2) G-P(sol) polarization free energy of solvation -22.027 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 4.484 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.663 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.364 kcal (6) G-S(sol) free energy of system = (1) + (5) 5.147 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds