Wall clock time and date at job start Tue Mar 9 2021 13:43:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.33815 * 122.44600 * 2 1 4 4 C 1.50695 * 124.52487 * 0.02562 * 3 2 1 5 5 O 1.42891 * 109.47456 * 246.72169 * 4 3 2 6 6 Si 1.86304 * 109.47147 * 126.72018 * 4 3 2 7 7 S 1.70619 * 110.95060 * 179.77963 * 3 2 1 8 8 C 1.75832 * 91.56541 * 0.30583 * 7 3 2 9 9 C 1.46581 * 125.45619 * 179.97438 * 8 7 3 10 10 O 1.21711 * 119.99659 * 179.69078 * 9 8 7 11 11 N 1.34771 * 120.00101 * 359.68758 * 9 8 7 12 12 C 1.46500 * 119.99642 * 180.02562 * 11 9 8 13 13 H 1.08999 * 112.85181 * 336.19549 * 12 11 9 14 14 C 1.53780 * 113.61643 * 107.50347 * 12 11 9 15 15 C 1.53783 * 87.08142 * 89.11528 * 14 12 11 16 16 H 1.09002 * 113.68599 * 270.87467 * 15 14 12 17 17 C 1.50699 * 113.61706 * 139.98538 * 15 14 12 18 18 C 1.38439 * 120.01387 * 142.50005 * 17 15 14 19 19 F 1.35095 * 120.02437 * 0.25465 * 18 17 15 20 20 C 1.38484 * 119.94654 * 179.97438 * 18 17 15 21 21 C 1.38180 * 119.97536 * 359.97438 * 20 18 17 22 22 C 1.38267 * 120.02376 * 0.02766 * 21 20 18 23 23 C 1.38218 * 120.00970 * 322.50193 * 17 15 14 24 24 C 1.53774 * 87.08271 * 25.43276 * 15 14 12 25 25 C 1.36648 * 109.08046 * 359.69412 * 8 7 3 26 26 H 1.08995 * 109.47549 * 275.12843 * 1 2 3 27 27 H 1.08997 * 109.47208 * 35.13268 * 1 2 3 28 28 H 1.09000 * 109.46763 * 155.13047 * 1 2 3 29 29 H 1.09002 * 109.47152 * 6.72293 * 4 3 2 30 30 H 0.96705 * 113.99840 * 300.00024 * 5 4 3 31 31 H 1.48496 * 110.00114 * 180.02562 * 6 4 3 32 32 H 1.48500 * 109.99734 * 301.32300 * 6 4 3 33 33 H 0.96995 * 120.00474 * 359.97438 * 11 9 8 34 34 H 1.09003 * 113.61146 * 334.56678 * 14 12 11 35 35 H 1.08998 * 113.62033 * 203.66053 * 14 12 11 36 36 H 1.07998 * 120.00952 * 179.97438 * 20 18 17 37 37 H 1.07999 * 119.98443 * 180.02562 * 21 20 18 38 38 H 1.08001 * 119.97092 * 179.97438 * 22 21 20 39 39 H 1.08002 * 119.98867 * 0.02562 * 23 17 15 40 40 H 1.09005 * 113.61077 * 89.11449 * 24 15 14 41 41 H 1.09003 * 113.61697 * 219.93744 * 24 15 14 42 42 H 1.08004 * 123.34968 * 180.25158 * 25 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2250 1.1293 0.0000 4 6 1.6355 2.5161 0.0006 5 8 1.9386 3.1631 -1.2369 6 14 2.3596 3.4982 1.4085 7 16 3.8969 0.7892 0.0061 8 6 3.5938 -0.9427 -0.0007 9 6 4.6232 -1.9862 -0.0001 10 8 4.3003 -3.1596 0.0006 11 7 5.9274 -1.6461 -0.0003 12 6 6.9562 -2.6891 -0.0003 13 1 6.5993 -3.6358 0.4053 14 6 7.6904 -2.8303 -1.3441 15 6 8.6824 -1.7770 -0.8231 16 1 8.3901 -0.7512 -1.0477 17 6 10.1166 -2.0687 -1.1824 18 6 10.9717 -1.0321 -1.5153 19 9 10.5224 0.2419 -1.5134 20 6 12.2895 -1.3017 -1.8447 21 6 12.7496 -2.6047 -1.8401 22 6 11.8946 -3.6391 -1.5075 23 6 10.5787 -3.3714 -1.1796 24 6 8.2980 -2.2306 0.5950 25 6 2.2447 -1.1601 -0.0003 26 1 -0.3634 0.0919 1.0235 27 1 -0.3633 0.8404 -0.5914 28 1 -0.3633 -0.9324 -0.4322 29 1 0.5541 2.4512 0.1213 30 1 2.8854 3.2556 -1.4108 31 1 1.7858 4.8677 1.4204 32 1 2.0786 2.8189 2.6988 33 1 6.1848 -0.7110 -0.0012 34 1 7.1045 -2.4930 -2.1992 35 1 8.1369 -3.8128 -1.4967 36 1 12.9573 -0.4939 -2.1049 37 1 13.7774 -2.8151 -2.0966 38 1 12.2549 -4.6572 -1.5046 39 1 9.9117 -4.1802 -0.9203 40 1 8.9107 -3.0494 0.9726 41 1 8.2041 -1.4095 1.3057 42 1 1.8020 -2.1452 0.0001 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705094_6739946.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:43:11 Heat of formation + Delta-G solvation = -30.406787 kcal Electronic energy + Delta-G solvation = -27017.891022 eV Core-core repulsion = 22971.173763 eV Total energy + Delta-G solvation = -4046.717259 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 348.098 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -49.84194 -41.61801 -40.45152 -39.71364 -38.73542 -37.59375 -34.69711 -32.61550 -31.75337 -31.47005 -29.92759 -27.33405 -26.86310 -25.97819 -24.48246 -23.73821 -22.73446 -21.96405 -20.46765 -20.02165 -19.55040 -18.71764 -17.86497 -17.48545 -17.45642 -17.14884 -16.73230 -16.57279 -16.26260 -16.07993 -15.79414 -15.39120 -15.32567 -15.13735 -14.92801 -14.73526 -14.36406 -14.19445 -14.14669 -13.96541 -13.62087 -13.53900 -13.23842 -13.17676 -13.10682 -12.99116 -12.48142 -12.46141 -12.23430 -12.00920 -11.98740 -11.85395 -11.34222 -11.12971 -10.82649 -10.22944 -9.94687 -9.72707 -9.61473 -9.51059 -5.26059 -0.67567 0.12966 0.18364 0.26236 0.66487 1.02037 1.24449 1.53528 1.82786 1.92887 2.12879 2.53242 3.21376 3.23046 3.32780 3.47398 3.50687 3.54769 3.66453 3.74081 3.82968 3.96747 4.03614 4.05395 4.11053 4.23933 4.30011 4.35115 4.40512 4.52974 4.58858 4.60239 4.67998 4.76184 4.79794 4.85188 4.89828 4.91516 4.99313 5.03238 5.16896 5.20833 5.30639 5.32239 5.39918 5.48450 5.87668 6.31020 6.31515 7.06095 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.102 4.102 2 C -0.098 4.098 3 C -0.231 4.231 4 C -0.034 4.034 5 O -0.532 6.532 6 Si 0.676 3.324 7 S 0.202 5.798 8 C -0.260 4.260 9 C 0.597 3.403 10 O -0.522 6.522 11 N -0.710 5.710 12 C 0.121 3.879 13 H 0.111 0.889 14 C -0.142 4.142 15 C -0.077 4.077 16 H 0.102 0.898 17 C -0.105 4.105 18 C 0.100 3.900 19 F -0.138 7.138 20 C -0.152 4.152 21 C -0.094 4.094 22 C -0.126 4.126 23 C -0.090 4.090 24 C -0.134 4.134 25 C -0.044 4.044 26 H 0.073 0.927 27 H 0.072 0.928 28 H 0.074 0.926 29 H 0.128 0.872 30 H 0.378 0.622 31 H -0.240 1.240 32 H -0.248 1.248 33 H 0.399 0.601 34 H 0.077 0.923 35 H 0.099 0.901 36 H 0.135 0.865 37 H 0.133 0.867 38 H 0.130 0.870 39 H 0.134 0.866 40 H 0.102 0.898 41 H 0.079 0.921 42 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.975 0.985 0.637 4.145 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.161 4.161 2 C -0.111 4.111 3 C -0.350 4.350 4 C -0.146 4.146 5 O -0.337 6.337 6 Si 0.575 3.425 7 S 0.471 5.529 8 C -0.380 4.380 9 C 0.383 3.617 10 O -0.399 6.399 11 N -0.361 5.361 12 C 0.016 3.984 13 H 0.129 0.871 14 C -0.181 4.181 15 C -0.095 4.095 16 H 0.120 0.880 17 C -0.106 4.106 18 C 0.081 3.919 19 F -0.117 7.117 20 C -0.171 4.171 21 C -0.112 4.112 22 C -0.145 4.145 23 C -0.108 4.108 24 C -0.172 4.172 25 C -0.077 4.077 26 H 0.092 0.908 27 H 0.091 0.909 28 H 0.093 0.907 29 H 0.145 0.855 30 H 0.225 0.775 31 H -0.163 1.163 32 H -0.171 1.171 33 H 0.234 0.766 34 H 0.096 0.904 35 H 0.117 0.883 36 H 0.153 0.847 37 H 0.151 0.849 38 H 0.148 0.852 39 H 0.151 0.849 40 H 0.120 0.880 41 H 0.098 0.902 42 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges 4.247 1.563 1.363 4.726 hybrid contribution -1.576 -0.507 -0.322 1.686 sum 2.671 1.056 1.041 3.055 Atomic orbital electron populations 1.20623 0.89133 1.03624 1.02695 1.18698 0.98151 0.90918 1.03291 1.24460 0.98854 1.00799 1.10901 1.24648 1.03809 0.89819 0.96356 1.86575 1.29747 1.79403 1.38011 0.95123 0.90148 0.80290 0.76941 1.82652 1.02883 0.98658 1.68686 1.24467 0.97933 0.96680 1.18952 1.16898 0.81475 0.87415 0.75919 1.90866 1.81506 1.18120 1.49423 1.45515 1.05015 1.09808 1.75766 1.21868 0.86932 0.92410 0.97184 0.87141 1.23581 0.96879 0.99662 0.97939 1.21557 0.90345 1.00526 0.97057 0.88026 1.19723 0.95570 0.92879 1.02386 1.17587 0.93033 0.78732 1.02555 1.91488 1.89589 1.36432 1.94153 1.21209 0.94275 0.98595 1.02992 1.21077 1.00293 0.91683 0.98178 1.21256 0.93598 0.99801 0.99808 1.20940 0.95901 0.95387 0.98572 1.23442 0.95474 1.02396 0.95891 1.20704 0.90914 1.00062 0.96013 0.90829 0.90922 0.90735 0.85492 0.77491 1.16338 1.17140 0.76579 0.90415 0.88318 0.84669 0.84932 0.85159 0.84857 0.87999 0.90208 0.82567 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.07 9.48 36.01 0.34 0.41 16 2 C -0.10 -0.07 5.78 -106.45 -0.62 -0.69 16 3 C -0.23 0.03 4.83 -35.86 -0.17 -0.14 16 4 C -0.03 0.02 2.77 36.00 0.10 0.12 16 5 O -0.53 0.15 12.88 -35.23 -0.45 -0.30 16 6 Si 0.68 -0.94 32.12 -169.99 -5.46 -6.40 16 7 S 0.20 -0.33 20.81 -107.50 -2.24 -2.56 16 8 C -0.26 -0.33 6.45 -36.79 -0.24 -0.56 16 9 C 0.60 1.47 7.78 -12.90 -0.10 1.37 16 10 O -0.52 -3.15 16.44 5.18 0.09 -3.06 16 11 N -0.71 0.25 5.26 -54.35 -0.29 -0.04 16 12 C 0.12 -0.10 4.32 -67.12 -0.29 -0.39 16 13 H 0.11 0.05 7.46 -51.93 -0.39 -0.34 16 14 C -0.14 0.18 7.25 -25.92 -0.19 -0.01 16 15 C -0.08 0.10 3.78 -90.96 -0.34 -0.24 16 16 H 0.10 -0.12 7.45 -51.93 -0.39 -0.51 16 17 C -0.10 0.02 5.29 -104.56 -0.55 -0.54 16 18 C 0.10 0.10 7.25 -39.42 -0.29 -0.18 16 19 F -0.14 -0.27 16.36 2.25 0.04 -0.23 16 20 C -0.15 -0.01 10.03 -39.51 -0.40 -0.40 16 21 C -0.09 0.10 10.04 -39.59 -0.40 -0.30 16 22 C -0.13 0.17 10.04 -39.58 -0.40 -0.23 16 23 C -0.09 0.11 8.61 -39.59 -0.34 -0.24 16 24 C -0.13 0.29 7.29 -25.92 -0.19 0.10 16 25 C -0.04 -0.07 9.78 -40.44 -0.40 -0.46 16 26 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 27 H 0.07 -0.06 7.00 -51.93 -0.36 -0.42 16 28 H 0.07 -0.09 8.10 -51.93 -0.42 -0.51 16 29 H 0.13 -0.09 6.25 -51.93 -0.32 -0.41 16 30 H 0.38 -1.52 8.70 45.56 0.40 -1.12 16 31 H -0.24 -0.30 7.11 56.52 0.40 0.10 16 32 H -0.25 -0.31 7.11 56.52 0.40 0.10 16 33 H 0.40 -0.96 7.81 -40.82 -0.32 -1.28 16 34 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 35 H 0.10 -0.20 6.31 -51.93 -0.33 -0.53 16 36 H 0.14 -0.17 8.06 -52.49 -0.42 -0.59 16 37 H 0.13 -0.39 8.06 -52.49 -0.42 -0.81 16 38 H 0.13 -0.41 8.06 -52.49 -0.42 -0.83 16 39 H 0.13 -0.39 6.66 -52.49 -0.35 -0.74 16 40 H 0.10 -0.28 7.72 -51.93 -0.40 -0.68 16 41 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 42 H 0.16 0.21 8.06 -52.48 -0.42 -0.21 16 LS Contribution 369.00 15.07 5.56 5.56 Total: 0.00 -7.55 369.00 -12.26 -19.81 By element: Atomic # 1 Polarization: -5.35 SS G_CDS: -5.04 Total: -10.39 kcal Atomic # 6 Polarization: 2.09 SS G_CDS: -4.46 Total: -2.37 kcal Atomic # 7 Polarization: 0.25 SS G_CDS: -0.29 Total: -0.04 kcal Atomic # 8 Polarization: -3.00 SS G_CDS: -0.37 Total: -3.37 kcal Atomic # 9 Polarization: -0.27 SS G_CDS: 0.04 Total: -0.23 kcal Atomic # 14 Polarization: -0.94 SS G_CDS: -5.46 Total: -6.40 kcal Atomic # 16 Polarization: -0.33 SS G_CDS: -2.24 Total: -2.56 kcal Total LS contribution 5.56 Total: 5.56 kcal Total: -7.55 -12.26 -19.81 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705094_6739946.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -10.596 kcal (2) G-P(sol) polarization free energy of solvation -7.552 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -18.148 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.258 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.811 kcal (6) G-S(sol) free energy of system = (1) + (5) -30.407 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds