Wall clock time and date at job start Tue Mar 9 2021 13:44:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86302 * 109.46994 * 2 1 4 4 C 1.50699 * 109.47212 * 119.99966 * 2 1 3 5 5 C 1.38237 * 119.99924 * 64.99682 * 4 2 1 6 6 C 1.38234 * 119.99970 * 179.97438 * 5 4 2 7 7 C 1.38237 * 119.99965 * 0.02576 * 6 5 4 8 8 C 1.50699 * 120.00011 * 179.97438 * 7 6 5 9 9 C 1.50696 * 109.47192 * 90.00136 * 8 7 6 10 10 O 1.21284 * 120.00109 * 359.97438 * 9 8 7 11 11 N 1.34777 * 120.00137 * 179.97438 * 9 8 7 12 12 C 1.46506 * 119.99873 * 179.97438 * 11 9 8 13 13 H 1.09002 * 112.85053 * 23.81070 * 12 11 9 14 14 C 1.53781 * 113.61132 * 155.00131 * 12 11 9 15 15 C 1.53785 * 87.08168 * 89.11771 * 14 12 11 16 16 H 1.09002 * 113.61486 * 270.80261 * 15 14 12 17 17 C 1.50698 * 113.61439 * 139.97636 * 15 14 12 18 18 C 1.38224 * 120.00315 * 299.73035 * 17 15 14 19 19 C 1.38239 * 120.00149 * 179.76624 * 18 17 15 20 20 C 1.38240 * 119.99879 * 0.48634 * 19 18 17 21 21 C 1.38243 * 119.99741 * 359.78741 * 20 19 18 22 22 C 1.38231 * 119.99784 * 359.95906 * 21 20 19 23 23 C 1.53782 * 113.61543 * 252.49944 * 12 11 9 24 24 C 1.38236 * 119.99837 * 0.25431 * 7 6 5 25 25 C 1.38231 * 120.00206 * 359.49134 * 24 7 6 26 26 H 0.96697 * 114.00047 * 60.00552 * 1 2 3 27 27 H 1.08994 * 109.47158 * 239.99931 * 2 1 3 28 28 H 1.48501 * 109.99787 * 298.67941 * 3 2 1 29 29 H 1.48499 * 109.99979 * 60.00085 * 3 2 1 30 30 H 1.08002 * 120.00057 * 0.02562 * 5 4 2 31 31 H 1.08002 * 120.00380 * 180.02562 * 6 5 4 32 32 H 1.09004 * 109.47103 * 330.00201 * 8 7 6 33 33 H 1.09000 * 109.47247 * 210.00079 * 8 7 6 34 34 H 0.96995 * 120.00018 * 0.27749 * 11 9 8 35 35 H 1.09001 * 113.61611 * 203.66335 * 14 12 11 36 36 H 1.08999 * 113.61739 * 334.57290 * 14 12 11 37 37 H 1.08000 * 120.00293 * 0.02562 * 18 17 15 38 38 H 1.07999 * 119.99995 * 180.25215 * 19 18 17 39 39 H 1.07990 * 120.00051 * 179.76924 * 20 19 18 40 40 H 1.07996 * 119.99891 * 179.97438 * 21 20 19 41 41 H 1.08004 * 119.99693 * 180.02562 * 22 21 20 42 42 H 1.09002 * 113.61503 * 25.43252 * 23 12 11 43 43 H 1.08994 * 113.61294 * 156.33804 * 23 12 11 44 44 H 1.08002 * 119.99598 * 179.72070 * 24 7 6 45 45 H 1.07997 * 120.00159 * 180.25381 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.6847 -2.0602 1.3984 6 6 2.1459 -2.7119 2.5268 7 6 2.8534 -2.0138 3.4876 8 6 3.3558 -2.7242 4.7180 9 6 4.7372 -3.2664 4.4562 10 8 5.2620 -3.0935 3.3765 11 7 5.3896 -3.9435 5.4218 12 6 6.7324 -4.4711 5.1670 13 1 7.2547 -3.9346 4.3749 14 6 7.5724 -4.6589 6.4414 15 6 6.9759 -6.0735 6.5316 16 1 6.0441 -6.1193 7.0954 17 6 7.9705 -7.1220 6.9587 18 6 9.0987 -7.3561 6.1953 19 6 10.0135 -8.3146 6.5897 20 6 9.7950 -9.0458 7.7423 21 6 8.6638 -8.8155 8.5028 22 6 7.7517 -7.8535 8.1112 23 6 6.7737 -6.0003 5.0089 24 6 3.0950 -0.6628 3.3224 25 6 2.6384 -0.0122 2.1915 26 1 -0.3933 0.4416 -0.7651 27 1 1.7923 -0.5138 -0.8899 28 1 1.5878 2.4585 -1.2243 29 1 1.5615 2.4679 1.2085 30 1 1.1323 -2.6057 0.6476 31 1 1.9536 -3.7666 2.6579 32 1 2.6832 -3.5463 4.9630 33 1 3.3925 -2.0238 5.5524 34 1 4.9683 -4.0853 6.2839 35 1 8.6474 -4.6491 6.2611 36 1 7.2737 -4.0060 7.2614 37 1 9.2677 -6.7874 5.2928 38 1 10.8971 -8.4947 5.9953 39 1 10.5077 -9.7971 8.0484 40 1 8.4928 -9.3870 9.4031 41 1 6.8681 -7.6733 8.7056 42 1 5.8302 -6.4301 4.6726 43 1 7.6302 -6.3570 4.4371 44 1 3.6439 -0.1164 4.0752 45 1 2.8307 1.0424 2.0605 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705150_12335836.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:44:26 Heat of formation + Delta-G solvation = 10.124204 kcal Electronic energy + Delta-G solvation = -25541.119025 eV Core-core repulsion = 21876.461051 eV Total energy + Delta-G solvation = -3664.657974 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.151 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -41.62848 -40.74937 -39.90500 -38.68581 -37.64802 -34.54618 -34.03436 -31.92087 -31.84978 -31.62891 -29.73246 -26.78570 -26.40035 -25.39173 -23.72568 -23.59048 -22.62617 -22.11982 -21.28711 -20.12447 -18.49359 -18.40515 -17.76040 -17.54515 -16.99747 -16.85036 -16.33703 -16.17741 -15.97719 -15.87959 -15.20596 -15.07558 -14.99825 -14.54473 -14.53280 -14.33712 -14.23583 -14.09070 -13.85301 -13.57127 -13.48118 -13.25803 -12.97050 -12.86187 -12.75016 -12.21538 -12.15720 -11.89058 -11.78168 -11.73635 -11.61068 -11.21127 -10.85341 -10.44070 -10.06760 -9.82098 -9.75936 -9.56454 -9.52318 -4.91268 0.32909 0.42392 0.49615 0.57245 1.32542 1.62546 1.66394 1.97815 2.09356 2.80400 2.82406 3.40433 3.41396 3.61846 3.64236 3.66394 3.84880 3.88937 3.93341 3.99095 3.99907 4.10244 4.11023 4.17812 4.23847 4.24656 4.41947 4.47318 4.53462 4.56568 4.58690 4.64952 4.67751 4.77566 4.80239 4.91192 4.95113 5.05509 5.09308 5.11388 5.14419 5.16405 5.47139 5.53823 5.57853 5.63618 5.65283 5.66940 5.72279 6.08467 6.09587 6.46762 6.47608 7.25244 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.077 4.077 3 Si 0.684 3.316 4 C -0.072 4.072 5 C -0.090 4.090 6 C -0.104 4.104 7 C -0.064 4.064 8 C -0.103 4.103 9 C 0.517 3.483 10 O -0.524 6.524 11 N -0.716 5.716 12 C 0.120 3.880 13 H 0.105 0.895 14 C -0.135 4.135 15 C -0.074 4.074 16 H 0.096 0.904 17 C -0.072 4.072 18 C -0.117 4.117 19 C -0.117 4.117 20 C -0.124 4.124 21 C -0.118 4.118 22 C -0.117 4.117 23 C -0.144 4.144 24 C -0.099 4.099 25 C -0.113 4.113 26 H 0.379 0.621 27 H 0.076 0.924 28 H -0.262 1.262 29 H -0.255 1.255 30 H 0.124 0.876 31 H 0.122 0.878 32 H 0.105 0.895 33 H 0.105 0.895 34 H 0.401 0.599 35 H 0.098 0.902 36 H 0.076 0.924 37 H 0.123 0.877 38 H 0.122 0.878 39 H 0.121 0.879 40 H 0.121 0.879 41 H 0.120 0.880 42 H 0.073 0.927 43 H 0.095 0.905 44 H 0.125 0.875 45 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.382 -0.915 2.793 3.248 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.186 4.186 3 Si 0.585 3.415 4 C -0.072 4.072 5 C -0.108 4.108 6 C -0.122 4.122 7 C -0.064 4.064 8 C -0.143 4.143 9 C 0.303 3.697 10 O -0.398 6.398 11 N -0.369 5.369 12 C 0.014 3.986 13 H 0.123 0.877 14 C -0.173 4.173 15 C -0.092 4.092 16 H 0.115 0.885 17 C -0.072 4.072 18 C -0.135 4.135 19 C -0.135 4.135 20 C -0.142 4.142 21 C -0.136 4.136 22 C -0.135 4.135 23 C -0.183 4.183 24 C -0.117 4.117 25 C -0.131 4.131 26 H 0.227 0.773 27 H 0.094 0.906 28 H -0.187 1.187 29 H -0.180 1.180 30 H 0.142 0.858 31 H 0.140 0.860 32 H 0.123 0.877 33 H 0.124 0.876 34 H 0.235 0.765 35 H 0.116 0.884 36 H 0.095 0.905 37 H 0.140 0.860 38 H 0.140 0.860 39 H 0.139 0.861 40 H 0.140 0.860 41 H 0.138 0.862 42 H 0.092 0.908 43 H 0.113 0.887 44 H 0.143 0.857 45 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges 1.644 -0.241 2.547 3.042 hybrid contribution -1.275 -0.446 0.007 1.351 sum 0.369 -0.687 2.554 2.671 Atomic orbital electron populations 1.86589 1.17867 1.80187 1.49701 1.24808 0.84373 1.11027 0.98436 0.94915 0.91806 0.74654 0.80099 1.19222 0.98730 0.94180 0.95058 1.20934 0.98514 0.93819 0.97546 1.20986 0.97854 0.99594 0.93736 1.19248 0.98111 0.93746 0.95335 1.20686 0.94052 1.01650 0.97896 1.20585 0.87362 0.77565 0.84158 1.90758 1.68126 1.57008 1.23948 1.45705 1.17326 1.56978 1.16845 1.21839 0.83348 0.94578 0.98804 0.87690 1.23421 1.00610 0.95692 0.97600 1.21593 0.97400 0.93237 0.96951 0.88542 1.19689 0.95543 0.96893 0.95098 1.21025 0.94211 0.98498 0.99785 1.21187 0.99269 0.96206 0.96881 1.21204 0.97760 0.99847 0.95422 1.21186 0.94574 0.98051 0.99816 1.21069 0.99542 0.96339 0.96568 1.23565 1.03262 0.96154 0.95274 1.20876 0.99326 0.93909 0.97630 1.20914 0.98918 0.99384 0.93864 0.77342 0.90634 1.18691 1.17999 0.85806 0.85983 0.87713 0.87643 0.76451 0.88400 0.90510 0.85953 0.85995 0.86088 0.86050 0.86193 0.90776 0.88684 0.85713 0.85609 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.14 12.81 -35.23 -0.45 -1.59 16 2 C -0.08 -0.09 2.79 36.01 0.10 0.01 16 3 Si 0.68 0.12 29.85 -169.99 -5.07 -4.95 16 4 C -0.07 -0.19 5.38 -104.62 -0.56 -0.76 16 5 C -0.09 -0.25 9.69 -39.58 -0.38 -0.63 16 6 C -0.10 -0.21 9.70 -39.58 -0.38 -0.59 16 7 C -0.06 -0.09 4.37 -104.62 -0.46 -0.55 16 8 C -0.10 0.15 5.83 -29.04 -0.17 -0.02 16 9 C 0.52 0.41 7.82 -10.99 -0.09 0.32 16 10 O -0.52 -2.75 15.63 5.55 0.09 -2.66 16 11 N -0.72 1.19 5.26 -53.01 -0.28 0.91 16 12 C 0.12 -0.11 4.32 -67.11 -0.29 -0.40 16 13 H 0.11 0.10 7.46 -51.93 -0.39 -0.28 16 14 C -0.14 0.28 7.29 -25.92 -0.19 0.09 16 15 C -0.07 0.13 3.86 -90.96 -0.35 -0.22 16 16 H 0.10 -0.26 8.09 -51.93 -0.42 -0.68 16 17 C -0.07 0.00 5.29 -104.63 -0.55 -0.55 16 18 C -0.12 -0.02 8.62 -39.59 -0.34 -0.36 16 19 C -0.12 -0.05 10.05 -39.58 -0.40 -0.45 16 20 C -0.12 -0.06 10.05 -39.58 -0.40 -0.46 16 21 C -0.12 -0.05 10.05 -39.58 -0.40 -0.45 16 22 C -0.12 -0.03 9.71 -39.58 -0.38 -0.41 16 23 C -0.14 0.15 7.25 -25.92 -0.19 -0.04 16 24 C -0.10 -0.16 9.70 -39.58 -0.38 -0.55 16 25 C -0.11 -0.23 8.67 -39.58 -0.34 -0.58 16 26 H 0.38 -0.73 8.74 45.56 0.40 -0.34 16 27 H 0.08 -0.02 7.96 -51.93 -0.41 -0.43 16 28 H -0.26 -0.51 7.11 56.52 0.40 -0.11 16 29 H -0.26 -0.77 7.05 56.52 0.40 -0.37 16 30 H 0.12 0.22 8.06 -52.49 -0.42 -0.20 16 31 H 0.12 0.04 8.06 -52.49 -0.42 -0.38 16 32 H 0.10 -0.36 8.09 -51.93 -0.42 -0.78 16 33 H 0.11 -0.38 8.08 -51.93 -0.42 -0.80 16 34 H 0.40 -1.74 8.70 -40.82 -0.36 -2.10 16 35 H 0.10 -0.18 7.73 -51.93 -0.40 -0.59 16 36 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 37 H 0.12 -0.14 6.64 -52.49 -0.35 -0.49 16 38 H 0.12 -0.14 8.06 -52.49 -0.42 -0.56 16 39 H 0.12 -0.12 8.06 -52.49 -0.42 -0.55 16 40 H 0.12 -0.14 8.06 -52.49 -0.42 -0.56 16 41 H 0.12 -0.16 8.06 -52.48 -0.42 -0.59 16 42 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 43 H 0.09 -0.10 6.30 -51.93 -0.33 -0.42 16 44 H 0.12 -0.05 8.06 -52.49 -0.42 -0.47 16 45 H 0.13 0.05 4.87 -52.49 -0.26 -0.20 16 LS Contribution 373.52 15.07 5.63 5.63 Total: 0.00 -8.63 373.52 -12.61 -21.24 By element: Atomic # 1 Polarization: -5.61 SS G_CDS: -6.36 Total: -11.97 kcal Atomic # 6 Polarization: -0.44 SS G_CDS: -6.16 Total: -6.59 kcal Atomic # 7 Polarization: 1.19 SS G_CDS: -0.28 Total: 0.91 kcal Atomic # 8 Polarization: -3.89 SS G_CDS: -0.36 Total: -4.26 kcal Atomic # 14 Polarization: 0.12 SS G_CDS: -5.07 Total: -4.95 kcal Total LS contribution 5.63 Total: 5.63 kcal Total: -8.63 -12.61 -21.24 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705150_12335836.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 31.363 kcal (2) G-P(sol) polarization free energy of solvation -8.633 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 22.730 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.606 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.238 kcal (6) G-S(sol) free energy of system = (1) + (5) 10.124 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds