Wall clock time and date at job start Tue Mar 9 2021 13:45:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86308 * 109.47274 * 2 1 4 4 C 1.50705 * 109.46665 * 119.99687 * 2 1 3 5 5 C 1.38180 * 119.84581 * 14.99783 * 4 2 1 6 6 C 1.38312 * 120.14750 * 179.97438 * 5 4 2 7 7 F 1.35100 * 120.08551 * 180.02562 * 6 5 4 8 8 C 1.39810 * 119.82950 * 359.97438 * 6 5 4 9 9 C 1.47694 * 120.15246 * 180.02562 * 8 6 5 10 10 O 1.21575 * 120.00195 * 359.97438 * 9 8 6 11 11 N 1.34773 * 120.00011 * 179.97438 * 9 8 6 12 12 C 1.46499 * 120.00415 * 180.02562 * 11 9 8 13 13 H 1.09005 * 112.84682 * 25.32504 * 12 11 9 14 14 C 1.53780 * 113.61903 * 156.52759 * 12 11 9 15 15 C 1.53772 * 87.08162 * 89.11357 * 14 12 11 16 16 H 1.09002 * 113.61717 * 270.79675 * 15 14 12 17 17 C 1.50707 * 113.61386 * 139.98015 * 15 14 12 18 18 C 1.38231 * 120.00240 * 299.73106 * 17 15 14 19 19 C 1.38236 * 120.00241 * 179.78537 * 18 17 15 20 20 C 1.38234 * 119.99549 * 0.46166 * 19 18 17 21 21 C 1.38231 * 120.00307 * 359.76852 * 20 19 18 22 22 C 1.38236 * 119.99690 * 119.99780 * 17 15 14 23 23 C 1.53783 * 113.61623 * 254.13520 * 12 11 9 24 24 C 1.39655 * 119.69067 * 0.02562 * 8 6 5 25 25 C 1.38063 * 119.84983 * 0.25140 * 24 8 6 26 26 F 1.35099 * 119.91485 * 179.74756 * 25 24 8 27 27 H 0.96701 * 113.99428 * 60.00293 * 1 2 3 28 28 H 1.08995 * 109.47135 * 239.99659 * 2 1 3 29 29 H 1.48500 * 109.99899 * 59.99530 * 3 2 1 30 30 H 1.48496 * 109.99829 * 181.31858 * 3 2 1 31 31 H 1.07997 * 119.92551 * 359.95865 * 5 4 2 32 32 H 0.97003 * 119.99703 * 359.97438 * 11 9 8 33 33 H 1.09004 * 113.61379 * 203.66757 * 14 12 11 34 34 H 1.09001 * 113.60891 * 334.48054 * 14 12 11 35 35 H 1.08006 * 119.99650 * 359.97438 * 18 17 15 36 36 H 1.07992 * 120.00085 * 180.24838 * 19 18 17 37 37 H 1.08000 * 119.99613 * 179.78744 * 20 19 18 38 38 H 1.08001 * 120.00009 * 180.02562 * 21 20 19 39 39 H 1.08002 * 120.00502 * 359.97438 * 22 17 15 40 40 H 1.09010 * 113.61157 * 25.42418 * 23 12 11 41 41 H 1.08991 * 113.62062 * 156.33129 * 23 12 11 42 42 H 1.08002 * 120.07040 * 179.97438 * 24 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9313 -0.7104 1.2306 5 6 1.0689 -1.4960 1.9712 6 6 1.5233 -2.1512 3.1013 7 9 0.6793 -2.9195 3.8242 8 6 2.8587 -2.0173 3.4931 9 6 3.3517 -2.7142 4.6984 10 8 2.5957 -3.4059 5.3526 11 7 4.6397 -2.5833 5.0730 12 6 5.1289 -3.2750 6.2682 13 1 4.5477 -4.1650 6.5098 14 6 6.6481 -3.5138 6.2634 15 6 6.7871 -2.1386 6.9372 16 1 6.8780 -1.3134 6.2308 17 6 7.8346 -2.1000 8.0200 18 6 7.7205 -2.9269 9.1218 19 6 8.6836 -2.8948 10.1129 20 6 9.7558 -2.0287 10.0067 21 6 9.8674 -1.1984 8.9073 22 6 8.9066 -1.2337 7.9141 23 6 5.3561 -2.3427 7.4699 24 6 3.7243 -1.2215 2.7395 25 6 3.2554 -0.5687 1.6169 26 9 4.0903 0.2055 0.8898 27 1 -0.3932 0.4417 -0.7651 28 1 1.7923 -0.5139 -0.8899 29 1 1.5615 2.4680 1.2084 30 1 3.5346 1.7703 -0.0321 31 1 0.0377 -1.5985 1.6670 32 1 5.2430 -2.0318 4.5508 33 1 6.9616 -4.3440 6.8964 34 1 7.0800 -3.5573 5.2635 35 1 6.8804 -3.6004 9.2068 36 1 8.5966 -3.5437 10.9717 37 1 10.5065 -2.0011 10.7827 38 1 10.7053 -0.5221 8.8242 39 1 8.9937 -0.5847 7.0551 40 1 4.7460 -1.4397 7.4434 41 1 5.3171 -2.8531 8.4321 42 1 4.7569 -1.1134 3.0368 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705150_12360598.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:45:19 Heat of formation + Delta-G solvation = -59.411764 kcal Electronic energy + Delta-G solvation = -29124.425539 eV Core-core repulsion = 24673.381927 eV Total energy + Delta-G solvation = -4451.043612 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.117 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -50.56903 -49.94683 -41.78041 -40.77523 -39.81982 -38.71281 -37.73804 -34.85444 -33.22631 -31.90660 -31.57994 -31.43513 -28.11546 -26.84576 -26.17884 -24.34192 -24.00610 -23.44728 -22.49224 -21.96706 -20.28748 -19.78784 -18.96275 -18.46492 -18.20832 -17.97378 -17.54849 -17.14402 -17.00379 -16.68982 -16.25081 -16.19592 -16.01377 -15.81852 -15.77468 -15.72711 -15.41070 -15.06159 -14.88209 -14.48315 -14.30913 -14.11508 -14.06900 -13.63577 -13.60049 -13.22527 -13.10601 -13.00455 -12.80859 -12.59567 -12.24773 -11.83868 -11.79688 -11.71221 -11.26840 -11.10703 -11.08443 -10.26605 -10.19579 -9.84287 -9.74106 -9.59143 -5.06687 -0.80269 -0.35073 0.40010 0.47583 1.04126 1.50107 1.57941 1.79988 1.89233 2.28067 2.60142 2.78992 2.79911 2.87008 3.11387 3.31078 3.42347 3.56449 3.58017 3.62586 3.78998 3.81990 3.96204 4.04543 4.08127 4.14003 4.21576 4.22588 4.31105 4.48024 4.53667 4.55880 4.61428 4.63326 4.65768 4.72783 4.79276 4.85644 4.90445 5.00966 5.07135 5.11947 5.36339 5.42140 5.55161 5.61601 5.68872 6.07393 6.24776 6.34726 7.00410 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.076 4.076 3 Si 0.684 3.316 4 C -0.054 4.054 5 C -0.111 4.111 6 C 0.161 3.839 7 F -0.104 7.104 8 C -0.153 4.153 9 C 0.564 3.436 10 O -0.511 6.511 11 N -0.707 5.707 12 C 0.119 3.881 13 H 0.108 0.892 14 C -0.134 4.134 15 C -0.074 4.074 16 H 0.096 0.904 17 C -0.073 4.073 18 C -0.117 4.117 19 C -0.117 4.117 20 C -0.124 4.124 21 C -0.118 4.118 22 C -0.117 4.117 23 C -0.144 4.144 24 C -0.084 4.084 25 C 0.064 3.936 26 F -0.114 7.114 27 H 0.392 0.608 28 H 0.093 0.907 29 H -0.256 1.256 30 H -0.226 1.226 31 H 0.166 0.834 32 H 0.400 0.600 33 H 0.101 0.899 34 H 0.077 0.923 35 H 0.123 0.877 36 H 0.122 0.878 37 H 0.121 0.879 38 H 0.122 0.878 39 H 0.120 0.880 40 H 0.075 0.925 41 H 0.098 0.902 42 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.591 2.932 -4.697 6.113 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.185 4.185 3 Si 0.582 3.418 4 C -0.055 4.055 5 C -0.130 4.130 6 C 0.140 3.860 7 F -0.082 7.082 8 C -0.157 4.157 9 C 0.350 3.650 10 O -0.386 6.386 11 N -0.359 5.359 12 C 0.014 3.986 13 H 0.126 0.874 14 C -0.172 4.172 15 C -0.092 4.092 16 H 0.114 0.886 17 C -0.073 4.073 18 C -0.135 4.135 19 C -0.135 4.135 20 C -0.142 4.142 21 C -0.136 4.136 22 C -0.135 4.135 23 C -0.182 4.182 24 C -0.104 4.104 25 C 0.045 3.955 26 F -0.093 7.093 27 H 0.241 0.759 28 H 0.110 0.890 29 H -0.181 1.181 30 H -0.150 1.150 31 H 0.184 0.816 32 H 0.236 0.764 33 H 0.119 0.881 34 H 0.096 0.904 35 H 0.141 0.859 36 H 0.140 0.860 37 H 0.139 0.861 38 H 0.140 0.860 39 H 0.138 0.862 40 H 0.094 0.906 41 H 0.116 0.884 42 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges 2.608 2.686 -3.223 4.940 hybrid contribution 0.453 -0.245 -0.016 0.515 sum 3.061 2.441 -3.239 5.081 Atomic orbital electron populations 1.86372 1.16463 1.82061 1.50312 1.24668 0.86534 1.10939 0.96381 0.95775 0.81071 0.75427 0.89505 1.19472 0.91504 0.97000 0.97552 1.20872 1.02435 0.96491 0.93161 1.17679 0.86606 0.91262 0.90433 1.91652 1.69163 1.71583 1.75793 1.19834 0.93442 1.03544 0.98873 1.17797 0.82306 0.81060 0.83803 1.90893 1.55214 1.38527 1.53994 1.45529 1.10494 1.51201 1.28702 1.21907 0.95441 0.96416 0.84815 0.87361 1.23420 0.94332 0.97535 1.01913 1.21648 0.93360 0.98224 0.96010 0.88573 1.19667 0.95626 0.96511 0.95466 1.21026 0.99200 0.99331 0.93935 1.21186 0.94504 0.98888 0.98932 1.21207 0.98341 0.96406 0.98219 1.21186 0.98982 0.99149 0.94288 1.21067 0.94423 0.98892 0.99120 1.23623 0.95309 1.00729 0.98541 1.21036 1.00576 0.95592 0.93166 1.17200 0.87894 0.97090 0.93332 1.91513 1.70704 1.71191 1.75848 0.75941 0.88967 1.18065 1.15046 0.81615 0.76418 0.88078 0.90408 0.85922 0.85955 0.86051 0.86022 0.86205 0.90623 0.88388 0.83066 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 1.04 11.47 -35.23 -0.40 0.64 16 2 C -0.08 0.12 2.96 36.01 0.11 0.23 16 3 Si 0.68 -1.27 30.72 -169.99 -5.22 -6.49 16 4 C -0.05 -0.04 5.17 -104.48 -0.54 -0.58 16 5 C -0.11 -0.16 9.33 -39.58 -0.37 -0.53 16 6 C 0.16 0.47 7.28 -38.97 -0.28 0.19 16 7 F -0.10 -0.55 15.55 2.25 0.04 -0.51 16 8 C -0.15 -0.27 5.88 -104.92 -0.62 -0.88 16 9 C 0.56 1.61 7.77 -12.40 -0.10 1.52 16 10 O -0.51 -3.49 14.96 5.30 0.08 -3.41 16 11 N -0.71 0.29 5.21 -54.01 -0.28 0.00 16 12 C 0.12 -0.05 4.30 -67.12 -0.29 -0.34 16 13 H 0.11 0.13 7.50 -51.93 -0.39 -0.26 16 14 C -0.13 0.25 7.29 -25.92 -0.19 0.06 16 15 C -0.07 0.10 3.87 -90.82 -0.35 -0.25 16 16 H 0.10 -0.22 8.09 -51.93 -0.42 -0.64 16 17 C -0.07 -0.02 5.29 -104.62 -0.55 -0.57 16 18 C -0.12 -0.04 8.63 -39.58 -0.34 -0.38 16 19 C -0.12 -0.06 10.05 -39.58 -0.40 -0.46 16 20 C -0.12 -0.08 10.05 -39.59 -0.40 -0.48 16 21 C -0.12 -0.07 10.05 -39.58 -0.40 -0.47 16 22 C -0.12 -0.05 9.71 -39.58 -0.38 -0.43 16 23 C -0.14 0.09 7.27 -25.78 -0.19 -0.10 16 24 C -0.08 0.04 9.51 -39.12 -0.37 -0.33 16 25 C 0.06 0.03 6.65 -39.49 -0.26 -0.23 16 26 F -0.11 -0.10 12.82 2.25 0.03 -0.07 16 27 H 0.39 -2.64 8.74 45.56 0.40 -2.25 16 28 H 0.09 -0.31 7.96 -51.93 -0.41 -0.72 16 29 H -0.26 -0.53 7.11 56.52 0.40 -0.13 16 30 H -0.23 -0.09 5.38 56.52 0.30 0.22 16 31 H 0.17 0.14 7.12 -52.49 -0.37 -0.23 16 32 H 0.40 -1.25 6.74 -40.82 -0.27 -1.53 16 33 H 0.10 -0.19 7.73 -51.93 -0.40 -0.59 16 34 H 0.08 -0.19 8.14 -51.93 -0.42 -0.62 16 35 H 0.12 -0.13 6.64 -52.48 -0.35 -0.48 16 36 H 0.12 -0.12 8.06 -52.49 -0.42 -0.54 16 37 H 0.12 -0.11 8.06 -52.49 -0.42 -0.53 16 38 H 0.12 -0.12 8.06 -52.49 -0.42 -0.55 16 39 H 0.12 -0.14 8.05 -52.49 -0.42 -0.56 16 40 H 0.08 0.02 8.14 -51.92 -0.42 -0.40 16 41 H 0.10 -0.09 6.30 -51.93 -0.33 -0.41 16 42 H 0.15 -0.55 6.40 -52.49 -0.34 -0.88 16 LS Contribution 355.98 15.07 5.36 5.36 Total: 0.00 -8.58 355.98 -11.04 -19.62 By element: Atomic # 1 Polarization: -6.39 SS G_CDS: -4.72 Total: -11.11 kcal Atomic # 6 Polarization: 1.90 SS G_CDS: -5.92 Total: -4.03 kcal Atomic # 7 Polarization: 0.29 SS G_CDS: -0.28 Total: 0.00 kcal Atomic # 8 Polarization: -2.45 SS G_CDS: -0.32 Total: -2.78 kcal Atomic # 9 Polarization: -0.65 SS G_CDS: 0.06 Total: -0.58 kcal Atomic # 14 Polarization: -1.27 SS G_CDS: -5.22 Total: -6.49 kcal Total LS contribution 5.36 Total: 5.36 kcal Total: -8.58 -11.04 -19.62 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705150_12360598.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -39.795 kcal (2) G-P(sol) polarization free energy of solvation -8.576 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -48.371 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.040 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.617 kcal (6) G-S(sol) free energy of system = (1) + (5) -59.412 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds