Wall clock time and date at job start Tue Mar 9 2021 13:45:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50707 * 1 3 3 C 1.39278 * 121.03024 * 2 1 4 4 C 1.46499 * 134.20720 * 359.97438 * 3 2 1 5 5 C 1.50706 * 126.59635 * 359.97438 * 4 3 2 6 6 O 1.42896 * 109.46847 * 284.99965 * 5 4 3 7 7 Si 1.86298 * 109.47111 * 164.99924 * 5 4 3 8 8 C 1.34172 * 106.80511 * 180.02562 * 4 3 2 9 9 N 1.36954 * 109.95284 * 359.97438 * 8 4 3 10 10 C 1.37153 * 110.11406 * 0.02562 * 9 8 4 11 11 N 1.32820 * 132.96596 * 180.02562 * 10 9 8 12 12 C 1.31302 * 121.88806 * 179.72455 * 11 10 9 13 13 C 1.39749 * 121.02959 * 179.97438 * 2 1 3 14 14 C 1.47670 * 120.45164 * 0.02562 * 13 2 1 15 15 O 1.21573 * 120.00355 * 354.19409 * 14 13 2 16 16 N 1.34775 * 119.99603 * 174.19277 * 14 13 2 17 17 C 1.46505 * 120.00037 * 179.97438 * 16 14 13 18 18 H 1.08996 * 112.90353 * 23.75371 * 17 16 14 19 19 C 1.53782 * 113.61514 * 154.99823 * 17 16 14 20 20 C 1.53783 * 87.07657 * 89.11733 * 19 17 16 21 21 H 1.08998 * 113.62036 * 270.88252 * 20 19 17 22 22 C 1.50704 * 113.61110 * 139.97693 * 20 19 17 23 23 C 1.38229 * 120.00473 * 299.72920 * 22 20 19 24 24 C 1.38233 * 120.00099 * 179.76779 * 23 22 20 25 25 C 1.38232 * 119.99950 * 0.48083 * 24 23 22 26 26 C 1.38228 * 119.99974 * 359.79349 * 25 24 23 27 27 C 1.38231 * 120.00229 * 359.95581 * 26 25 24 28 28 C 1.53778 * 87.08347 * 25.43485 * 20 19 17 29 29 H 1.09005 * 109.46642 * 263.79007 * 1 2 3 30 30 H 1.08999 * 109.46774 * 23.78162 * 1 2 3 31 31 H 1.08990 * 109.47296 * 143.78750 * 1 2 3 32 32 H 1.08995 * 109.46726 * 44.99707 * 5 4 3 33 33 H 0.96698 * 113.99924 * 179.97438 * 6 5 4 34 34 H 1.48500 * 109.99964 * 59.99696 * 7 5 4 35 35 H 1.48502 * 109.99947 * 181.31819 * 7 5 4 36 36 H 1.08002 * 125.02340 * 180.02562 * 8 4 3 37 37 H 0.96996 * 124.94318 * 180.02562 * 9 8 4 38 38 H 1.08006 * 119.30952 * 180.28048 * 12 11 10 39 39 H 0.97002 * 120.00514 * 0.02562 * 16 14 13 40 40 H 1.08991 * 113.61298 * 203.66567 * 19 17 16 41 41 H 1.08993 * 113.61446 * 334.57474 * 19 17 16 42 42 H 1.08000 * 119.99999 * 0.02562 * 23 22 20 43 43 H 1.08008 * 120.00015 * 180.25755 * 24 23 22 44 44 H 1.08005 * 120.00115 * 179.77136 * 25 24 23 45 45 H 1.08009 * 120.00178 * 179.97438 * 26 25 24 46 46 H 1.07999 * 120.00123 * 179.97438 * 27 26 25 47 47 H 1.09003 * 113.61353 * 220.01921 * 28 20 19 48 48 H 1.08996 * 113.61848 * 89.11139 * 28 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2250 1.1935 0.0000 4 6 1.8517 2.6101 -0.0005 5 6 0.4528 3.1706 -0.0017 6 8 -0.1179 3.0239 -1.3035 7 14 0.5070 4.9765 0.4528 8 6 2.9949 3.3125 -0.0008 9 7 4.0670 2.4603 0.0000 10 6 3.6349 1.1587 0.0003 11 7 4.2721 -0.0067 0.0015 12 6 3.6267 -1.1501 0.0069 13 6 2.2274 -1.1975 0.0005 14 6 1.5224 -2.4950 0.0005 15 8 0.3118 -2.5291 0.1066 16 7 2.2211 -3.6415 -0.1170 17 6 1.5217 -4.9289 -0.1165 18 1 0.4799 -4.8458 -0.4259 19 6 2.2911 -6.0482 -0.8377 20 6 2.9605 -6.3508 0.5134 21 1 3.8742 -5.7818 0.6852 22 6 3.1258 -7.8232 0.7887 23 6 2.0151 -8.6438 0.8513 24 6 2.1672 -9.9952 1.0991 25 6 3.4293 -10.5243 1.2942 26 6 4.5395 -9.7028 1.2373 27 6 4.3879 -8.3524 0.9844 28 6 1.7176 -5.7358 1.1779 29 1 -0.3633 -0.1112 1.0217 30 1 -0.3633 0.9404 -0.4144 31 1 -0.3633 -0.8291 -0.6071 32 1 -0.1553 2.6312 0.7245 33 1 -1.0202 3.3637 -1.3779 34 1 1.3332 5.7229 -0.5298 35 1 -0.8693 5.5333 0.4862 36 1 3.0600 4.3906 -0.0007 37 1 4.9967 2.7371 0.0004 38 1 4.1869 -2.0735 0.0122 39 1 3.1871 -3.6144 -0.2013 40 1 1.6525 -6.8542 -1.1988 41 1 2.9837 -5.6834 -1.5960 42 1 1.0288 -8.2297 0.7024 43 1 1.2997 -10.6370 1.1438 44 1 3.5478 -11.5796 1.4915 45 1 5.5256 -10.1162 1.3902 46 1 5.2553 -7.7105 0.9403 47 1 1.9472 -5.1187 2.0466 48 1 0.9221 -6.4564 1.3677 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705150_12890568.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:45:48 Heat of formation + Delta-G solvation = 65.298291 kcal Electronic energy + Delta-G solvation = -31447.422004 eV Core-core repulsion = 27242.314836 eV Total energy + Delta-G solvation = -4205.107168 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.157 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -42.80391 -41.55770 -40.39312 -39.02528 -38.37860 -37.83218 -35.12856 -34.48804 -32.10292 -31.92070 -31.71534 -30.66195 -28.75952 -26.74600 -26.63326 -26.05640 -24.62369 -23.95599 -23.47126 -22.41522 -21.88674 -20.37137 -20.12865 -19.20175 -18.69406 -18.50823 -17.96549 -17.54146 -17.09087 -16.68217 -16.39064 -16.13656 -16.08729 -15.77749 -15.56444 -15.27362 -15.07790 -15.01830 -14.67409 -14.57397 -14.26845 -14.10235 -14.04300 -13.88930 -13.65241 -13.53230 -13.45549 -13.24160 -13.02935 -12.82061 -12.68933 -12.67213 -12.17046 -12.01454 -11.73802 -11.70172 -11.17502 -11.04304 -10.96674 -10.44978 -10.21724 -10.04386 -9.79063 -9.55941 -9.52034 -9.09904 -5.02040 -0.19980 -0.01478 0.45608 0.52747 1.21930 1.39430 1.51754 1.65208 1.89145 1.94525 2.08009 2.85066 2.88009 3.27187 3.35040 3.44645 3.59271 3.65906 3.68059 3.72831 3.78061 3.83003 3.91518 4.03336 4.10079 4.13254 4.15157 4.21306 4.26954 4.32062 4.48755 4.57076 4.61885 4.68098 4.69550 4.71647 4.77018 4.84047 4.93614 4.94848 5.00023 5.08055 5.11001 5.13748 5.17729 5.24693 5.40135 5.51991 5.59688 5.62797 5.66680 5.75743 5.80846 6.12692 6.13963 6.46201 6.49490 6.88826 7.26795 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.131 4.131 2 C 0.085 3.915 3 C -0.148 4.148 4 C -0.133 4.133 5 C -0.044 4.044 6 O -0.534 6.534 7 Si 0.682 3.318 8 C 0.072 3.928 9 N -0.569 5.569 10 C 0.308 3.692 11 N -0.503 5.503 12 C 0.180 3.820 13 C -0.234 4.234 14 C 0.576 3.424 15 O -0.528 6.528 16 N -0.711 5.711 17 C 0.122 3.878 18 H 0.107 0.893 19 C -0.136 4.136 20 C -0.074 4.074 21 H 0.097 0.903 22 C -0.071 4.071 23 C -0.117 4.117 24 C -0.118 4.118 25 C -0.125 4.125 26 C -0.118 4.118 27 C -0.117 4.117 28 C -0.144 4.144 29 H 0.082 0.918 30 H 0.077 0.923 31 H 0.098 0.902 32 H 0.077 0.923 33 H 0.379 0.621 34 H -0.253 1.253 35 H -0.258 1.258 36 H 0.184 0.816 37 H 0.426 0.574 38 H 0.162 0.838 39 H 0.399 0.601 40 H 0.098 0.902 41 H 0.077 0.923 42 H 0.123 0.877 43 H 0.122 0.878 44 H 0.121 0.879 45 H 0.121 0.879 46 H 0.120 0.880 47 H 0.075 0.925 48 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.913 1.518 2.036 3.179 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.187 4.187 2 C 0.077 3.923 3 C -0.155 4.155 4 C -0.141 4.141 5 C -0.154 4.154 6 O -0.341 6.341 7 Si 0.582 3.418 8 C -0.054 4.054 9 N -0.175 5.175 10 C 0.075 3.925 11 N -0.216 5.216 12 C 0.011 3.989 13 C -0.241 4.241 14 C 0.364 3.636 15 O -0.405 6.405 16 N -0.363 5.363 17 C 0.016 3.984 18 H 0.125 0.875 19 C -0.174 4.174 20 C -0.093 4.093 21 H 0.115 0.885 22 C -0.071 4.071 23 C -0.135 4.135 24 C -0.136 4.136 25 C -0.143 4.143 26 C -0.136 4.136 27 C -0.135 4.135 28 C -0.182 4.182 29 H 0.100 0.900 30 H 0.096 0.904 31 H 0.117 0.883 32 H 0.095 0.905 33 H 0.227 0.773 34 H -0.177 1.177 35 H -0.182 1.182 36 H 0.201 0.799 37 H 0.265 0.735 38 H 0.179 0.821 39 H 0.235 0.765 40 H 0.117 0.883 41 H 0.096 0.904 42 H 0.141 0.859 43 H 0.140 0.860 44 H 0.139 0.861 45 H 0.139 0.861 46 H 0.138 0.862 47 H 0.094 0.906 48 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges 2.457 2.228 1.733 3.742 hybrid contribution -0.521 -0.321 -0.780 0.992 sum 1.936 1.907 0.953 2.880 Atomic orbital electron populations 1.21235 0.88995 1.04611 1.03820 1.19880 0.97090 0.89157 0.86187 1.19464 0.92852 0.93489 1.09686 1.19421 0.93123 0.90581 1.10946 1.24110 0.92133 1.11321 0.87872 1.86642 1.33721 1.83780 1.29948 0.95194 0.83419 0.74040 0.89144 1.21725 0.85005 0.95938 1.02735 1.41488 1.09579 1.02674 1.63734 1.18475 0.89279 0.85896 0.98826 1.66430 1.40535 0.95987 1.18616 1.22486 0.90067 0.94432 0.91910 1.20399 0.94757 0.93653 1.15305 1.17860 0.86815 0.83166 0.75782 1.90751 1.13529 1.86989 1.49259 1.45562 1.10444 1.05067 1.75222 1.21840 0.97938 0.81811 0.96793 0.87491 1.23430 0.99588 0.98070 0.96290 1.21605 0.98645 0.92097 0.96923 0.88489 1.19688 0.93250 0.94848 0.99357 1.21023 0.98468 0.93554 1.00465 1.21180 0.97475 0.95304 0.99609 1.21195 0.92797 0.99944 1.00327 1.21182 0.98865 0.93838 0.99750 1.21074 0.96785 0.95396 1.00239 1.23573 0.97692 0.99160 0.97819 0.89954 0.90434 0.88316 0.90471 0.77347 1.17709 1.18220 0.79915 0.73518 0.82148 0.76532 0.88314 0.90448 0.85937 0.86026 0.86122 0.86071 0.86163 0.90636 0.88616 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -0.36 8.46 36.01 0.30 -0.06 16 2 C 0.09 0.29 5.98 -103.67 -0.62 -0.33 16 3 C -0.15 -0.47 6.16 -105.13 -0.65 -1.11 16 4 C -0.13 -0.17 5.61 -102.73 -0.58 -0.74 16 5 C -0.04 0.01 1.87 36.01 0.07 0.08 16 6 O -0.53 -0.48 11.65 -35.23 -0.41 -0.89 16 7 Si 0.68 -1.37 30.80 -169.99 -5.24 -6.61 16 8 C 0.07 -0.05 10.44 -16.70 -0.17 -0.23 16 9 N -0.57 0.10 6.04 -12.11 -0.07 0.03 16 10 C 0.31 0.86 8.42 -155.71 -1.31 -0.45 16 11 N -0.50 -1.44 10.37 -11.96 -0.12 -1.57 16 12 C 0.18 0.22 10.67 -17.12 -0.18 0.03 16 13 C -0.23 -0.57 5.89 -104.82 -0.62 -1.19 16 14 C 0.58 1.44 7.72 -12.41 -0.10 1.35 16 15 O -0.53 -2.81 13.09 5.30 0.07 -2.74 16 16 N -0.71 0.31 5.21 -54.01 -0.28 0.03 16 17 C 0.12 -0.06 4.32 -67.12 -0.29 -0.35 16 18 H 0.11 0.11 7.46 -51.93 -0.39 -0.28 16 19 C -0.14 0.23 7.29 -25.92 -0.19 0.04 16 20 C -0.07 0.10 3.86 -90.96 -0.35 -0.25 16 21 H 0.10 -0.22 8.10 -51.93 -0.42 -0.64 16 22 C -0.07 -0.02 5.29 -104.62 -0.55 -0.57 16 23 C -0.12 -0.04 8.62 -39.59 -0.34 -0.39 16 24 C -0.12 -0.07 10.05 -39.59 -0.40 -0.47 16 25 C -0.12 -0.09 10.05 -39.59 -0.40 -0.49 16 26 C -0.12 -0.08 10.05 -39.59 -0.40 -0.48 16 27 C -0.12 -0.06 9.71 -39.58 -0.38 -0.44 16 28 C -0.14 0.12 7.25 -25.92 -0.19 -0.07 16 29 H 0.08 0.19 8.14 -51.93 -0.42 -0.23 16 30 H 0.08 0.16 4.79 -51.93 -0.25 -0.09 16 31 H 0.10 0.41 5.94 -51.93 -0.31 0.10 16 32 H 0.08 -0.10 7.13 -51.93 -0.37 -0.47 16 33 H 0.38 -1.14 8.74 45.56 0.40 -0.74 16 34 H -0.25 -0.07 7.04 56.52 0.40 0.33 16 35 H -0.26 -0.08 7.11 56.52 0.40 0.32 16 36 H 0.18 -0.70 6.31 -52.49 -0.33 -1.03 16 37 H 0.43 -1.24 8.96 -40.82 -0.37 -1.61 16 38 H 0.16 -0.39 6.43 -52.48 -0.34 -0.73 16 39 H 0.40 -1.14 6.78 -40.82 -0.28 -1.42 16 40 H 0.10 -0.16 7.73 -51.93 -0.40 -0.57 16 41 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 42 H 0.12 -0.13 6.64 -52.49 -0.35 -0.47 16 43 H 0.12 -0.11 8.06 -52.48 -0.42 -0.54 16 44 H 0.12 -0.10 8.06 -52.48 -0.42 -0.52 16 45 H 0.12 -0.11 8.06 -52.48 -0.42 -0.53 16 46 H 0.12 -0.13 8.06 -52.49 -0.42 -0.55 16 47 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 48 H 0.10 -0.10 6.30 -51.93 -0.33 -0.42 16 LS Contribution 386.98 15.07 5.83 5.83 Total: 0.00 -9.67 386.98 -13.45 -23.12 By element: Atomic # 1 Polarization: -5.21 SS G_CDS: -5.89 Total: -11.10 kcal Atomic # 6 Polarization: 1.23 SS G_CDS: -7.34 Total: -6.11 kcal Atomic # 7 Polarization: -1.03 SS G_CDS: -0.48 Total: -1.51 kcal Atomic # 8 Polarization: -3.29 SS G_CDS: -0.34 Total: -3.63 kcal Atomic # 14 Polarization: -1.37 SS G_CDS: -5.24 Total: -6.61 kcal Total LS contribution 5.83 Total: 5.83 kcal Total: -9.67 -13.45 -23.12 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705150_12890568.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 88.422 kcal (2) G-P(sol) polarization free energy of solvation -9.672 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 78.751 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.452 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.124 kcal (6) G-S(sol) free energy of system = (1) + (5) 65.298 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds