Wall clock time and date at job start Tue Mar 9 2021 13:45:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86300 * 109.47486 * 2 1 4 4 C 1.50697 * 109.47108 * 120.00499 * 2 1 3 5 5 C 1.38331 * 119.87558 * 64.99417 * 4 2 1 6 6 C 1.38004 * 120.12951 * 179.97438 * 5 4 2 7 7 C 1.39399 * 119.87012 * 359.97438 * 6 5 4 8 8 C 1.48276 * 120.12935 * 179.97438 * 7 6 5 9 9 C 1.39504 * 119.97670 * 180.02562 * 8 7 6 10 10 C 1.37670 * 120.02330 * 179.97438 * 9 8 7 11 11 C 1.39707 * 119.97515 * 0.02562 * 10 9 8 12 12 C 1.47720 * 120.02564 * 179.97438 * 11 10 9 13 13 O 1.21573 * 119.99886 * 0.02562 * 12 11 10 14 14 N 1.34777 * 120.00116 * 179.72669 * 12 11 10 15 15 C 1.46499 * 120.00195 * 180.27923 * 14 12 11 16 16 H 1.09008 * 112.84699 * 23.79416 * 15 14 12 17 17 C 1.53775 * 113.61883 * 154.99379 * 15 14 12 18 18 C 1.53785 * 87.07931 * 89.11482 * 17 15 14 19 19 H 1.08996 * 113.61985 * 270.88597 * 18 17 15 20 20 C 1.50701 * 113.61526 * 139.98270 * 18 17 15 21 21 C 1.38239 * 119.99634 * 299.73039 * 20 18 17 22 22 C 1.38237 * 119.99453 * 179.74637 * 21 20 18 23 23 C 1.38234 * 119.99986 * 0.54363 * 22 21 20 24 24 C 1.38227 * 120.00230 * 359.71050 * 23 22 21 25 25 C 1.38228 * 120.00129 * 120.00095 * 20 18 17 26 26 C 1.53779 * 87.08126 * 25.43474 * 18 17 15 27 27 C 1.39710 * 119.95200 * 0.27249 * 11 10 9 28 28 C 1.37666 * 119.97501 * 359.42056 * 27 11 10 29 29 C 1.39407 * 119.74692 * 0.25754 * 7 6 5 30 30 C 1.37999 * 119.86933 * 359.49151 * 29 7 6 31 31 H 0.96703 * 113.99911 * 300.00174 * 1 2 3 32 32 H 1.09003 * 109.46863 * 239.99836 * 2 1 3 33 33 H 1.48501 * 109.99947 * 299.99948 * 3 2 1 34 34 H 1.48496 * 109.99833 * 61.31811 * 3 2 1 35 35 H 1.07997 * 119.93912 * 359.95581 * 5 4 2 36 36 H 1.07994 * 120.06656 * 180.02562 * 6 5 4 37 37 H 1.07999 * 119.99201 * 0.02562 * 9 8 7 38 38 H 1.08001 * 120.01450 * 180.02562 * 10 9 8 39 39 H 0.97000 * 119.99736 * 0.27195 * 14 12 11 40 40 H 1.08993 * 113.61771 * 203.66472 * 17 15 14 41 41 H 1.09001 * 113.61256 * 334.49207 * 17 15 14 42 42 H 1.07997 * 120.00263 * 359.97438 * 21 20 18 43 43 H 1.08007 * 119.99645 * 180.27425 * 22 21 20 44 44 H 1.08004 * 119.99864 * 179.72887 * 23 22 21 45 45 H 1.08000 * 119.99890 * 179.97438 * 24 23 22 46 46 H 1.08007 * 120.00151 * 0.02562 * 25 20 18 47 47 H 1.09000 * 113.61513 * 220.01819 * 26 18 17 48 48 H 1.08999 * 113.61644 * 89.11218 * 26 18 17 49 49 H 1.07995 * 120.01401 * 179.72565 * 27 11 10 50 50 H 1.08002 * 119.99271 * 180.29617 * 28 27 11 51 51 H 1.08001 * 120.06735 * 179.72348 * 29 7 6 52 52 H 1.08004 * 119.94009 * 180.23148 * 30 29 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 1.6830 -2.0613 1.3957 6 6 2.1410 -2.7172 2.5202 7 6 2.8557 -2.0161 3.4902 8 6 3.3500 -2.7151 4.7008 9 6 4.0644 -2.0102 5.6698 10 6 4.5233 -2.6581 6.7945 11 6 4.2738 -4.0221 6.9649 12 6 4.7662 -4.7185 8.1710 13 8 5.3884 -4.1046 9.0160 14 7 4.5205 -6.0332 8.3376 15 6 5.0036 -6.7225 9.5366 16 1 5.1652 -6.0472 10.3769 17 6 4.1858 -7.9731 9.8999 18 6 5.1427 -8.7657 8.9938 19 1 4.8213 -8.8115 7.9533 20 6 5.5230 -10.1137 9.5500 21 6 6.1736 -10.2008 10.7666 22 6 6.5178 -11.4376 11.2792 23 6 6.2215 -12.5865 10.5700 24 6 5.5756 -12.4991 9.3511 25 6 5.2263 -11.2626 8.8410 26 6 6.1854 -7.6694 9.2688 27 6 3.5636 -4.7284 5.9909 28 6 3.1002 -4.0772 4.8701 29 6 3.0987 -0.6539 3.3205 30 6 2.6403 -0.0096 2.1895 31 1 -0.3933 0.4417 0.7651 32 1 1.7923 -0.5139 -0.8900 33 1 1.5617 2.4679 -1.2085 34 1 1.5880 2.4585 1.2242 35 1 1.1293 -2.6035 0.6435 36 1 1.9469 -3.7719 2.6480 37 1 4.2568 -0.9557 5.5381 38 1 5.0760 -2.1122 7.5447 39 1 4.0237 -6.5229 7.6636 40 1 4.2529 -8.2482 10.9524 41 1 3.1593 -7.9449 9.5343 42 1 6.4097 -9.3028 11.3182 43 1 7.0221 -11.5059 12.2319 44 1 6.4943 -13.5526 10.9686 45 1 5.3445 -13.3968 8.7968 46 1 4.7223 -11.1943 7.8882 47 1 6.7736 -7.3966 8.3926 48 1 6.7991 -7.8614 10.1488 49 1 3.3741 -5.7837 6.1195 50 1 2.5470 -4.6219 4.1192 51 1 3.6480 -0.1047 4.0709 52 1 2.8312 1.0449 2.0551 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705150_13158362.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:45:52 Heat of formation + Delta-G solvation = 47.992745 kcal Electronic energy + Delta-G solvation = -32474.381679 eV Core-core repulsion = 28142.923627 eV Total energy + Delta-G solvation = -4331.458052 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.167 amu Computer time = 1.20 seconds Orbital eigenvalues (eV) -41.77834 -41.05738 -40.43296 -39.37045 -38.59749 -37.63088 -34.87589 -33.90124 -32.58787 -31.90643 -31.68976 -31.51025 -30.64293 -27.20042 -26.71897 -26.07298 -24.66362 -24.49389 -23.51598 -22.69665 -22.52510 -22.23370 -21.35724 -20.16116 -19.25973 -18.54803 -18.05482 -17.70113 -17.24906 -16.85631 -16.39362 -16.31413 -16.23008 -16.10130 -15.96675 -15.80307 -15.42924 -15.14036 -15.07071 -14.94825 -14.88899 -14.58933 -14.32242 -14.23267 -14.18037 -14.07478 -13.98026 -13.54903 -13.48277 -13.24143 -13.05844 -12.79066 -12.72852 -12.59308 -12.15646 -12.06718 -11.93910 -11.74753 -11.68924 -11.52538 -11.17546 -11.13517 -10.77318 -10.59123 -10.16687 -10.06324 -9.94789 -9.80384 -9.54246 -9.07873 -4.93227 -0.69377 0.35011 0.41085 0.44206 0.49991 0.51428 1.30066 1.58007 1.76498 1.94591 1.99805 2.59845 2.84587 3.00580 3.37792 3.44540 3.46178 3.62894 3.63918 3.69573 3.73048 3.79801 3.87871 3.93958 4.01677 4.05200 4.06557 4.16500 4.24757 4.27239 4.28661 4.31833 4.37603 4.54957 4.57393 4.62917 4.65074 4.67313 4.69978 4.76155 4.82415 4.89797 4.92313 4.96702 5.00064 5.09032 5.11982 5.14459 5.15204 5.19442 5.21019 5.26956 5.41884 5.50199 5.51555 5.60278 5.65728 5.65791 5.75621 5.79772 5.93777 6.13964 6.42816 6.46418 7.10397 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.082 4.082 3 Si 0.762 3.238 4 C -0.115 4.115 5 C -0.101 4.101 6 C -0.107 4.107 7 C -0.059 4.059 8 C -0.022 4.022 9 C -0.122 4.122 10 C -0.070 4.070 11 C -0.152 4.152 12 C 0.559 3.441 13 O -0.580 6.580 14 N -0.694 5.694 15 C 0.114 3.886 16 H 0.086 0.914 17 C -0.124 4.124 18 C -0.065 4.065 19 H 0.112 0.888 20 C -0.079 4.079 21 C -0.129 4.129 22 C -0.131 4.131 23 C -0.138 4.138 24 C -0.131 4.131 25 C -0.127 4.127 26 C -0.143 4.143 27 C -0.074 4.074 28 C -0.120 4.120 29 C -0.107 4.107 30 C -0.122 4.122 31 H 0.386 0.614 32 H 0.126 0.874 33 H -0.305 1.305 34 H -0.282 1.282 35 H 0.133 0.867 36 H 0.147 0.853 37 H 0.148 0.852 38 H 0.128 0.872 39 H 0.415 0.585 40 H 0.099 0.901 41 H 0.089 0.911 42 H 0.130 0.870 43 H 0.132 0.868 44 H 0.131 0.869 45 H 0.134 0.866 46 H 0.136 0.864 47 H 0.067 0.933 48 H 0.096 0.904 49 H 0.157 0.843 50 H 0.156 0.844 51 H 0.145 0.855 52 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.579 -3.232 -2.432 4.086 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.356 6.356 2 C -0.191 4.191 3 Si 0.668 3.332 4 C -0.116 4.116 5 C -0.119 4.119 6 C -0.125 4.125 7 C -0.059 4.059 8 C -0.022 4.022 9 C -0.140 4.140 10 C -0.089 4.089 11 C -0.155 4.155 12 C 0.348 3.652 13 O -0.461 6.461 14 N -0.346 5.346 15 C 0.009 3.991 16 H 0.104 0.896 17 C -0.162 4.162 18 C -0.083 4.083 19 H 0.130 0.870 20 C -0.079 4.079 21 C -0.146 4.146 22 C -0.149 4.149 23 C -0.156 4.156 24 C -0.148 4.148 25 C -0.145 4.145 26 C -0.181 4.181 27 C -0.092 4.092 28 C -0.138 4.138 29 C -0.125 4.125 30 C -0.139 4.139 31 H 0.235 0.765 32 H 0.144 0.856 33 H -0.233 1.233 34 H -0.209 1.209 35 H 0.151 0.849 36 H 0.164 0.836 37 H 0.166 0.834 38 H 0.146 0.854 39 H 0.253 0.747 40 H 0.117 0.883 41 H 0.107 0.893 42 H 0.148 0.852 43 H 0.150 0.850 44 H 0.149 0.851 45 H 0.152 0.848 46 H 0.154 0.846 47 H 0.086 0.914 48 H 0.114 0.886 49 H 0.175 0.825 50 H 0.174 0.826 51 H 0.163 0.837 52 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -0.263 -2.311 -2.366 3.318 hybrid contribution -1.111 -0.306 0.432 1.231 sum -1.374 -2.617 -1.934 3.532 Atomic orbital electron populations 1.86580 1.18496 1.80341 1.50188 1.25205 0.83421 1.11609 0.98863 0.94071 0.90450 0.72391 0.76262 1.20444 0.99281 0.95098 0.96752 1.21118 0.98923 0.93924 0.97923 1.21525 0.96833 1.01037 0.93100 1.18937 0.99194 0.93834 0.93984 1.19156 0.95995 0.93944 0.93155 1.21388 0.98245 1.01270 0.93090 1.21266 0.96910 0.93405 0.97345 1.19970 1.04423 0.95204 0.95902 1.18571 0.78548 0.82199 0.85903 1.90774 1.42598 1.67165 1.45527 1.45464 1.56991 1.08643 1.23472 1.21876 0.95970 0.93305 0.87991 0.89598 1.23361 0.99032 0.92585 1.01203 1.21589 0.96837 0.89685 1.00199 0.87009 1.19860 0.98189 0.94970 0.94842 1.21234 0.99147 0.98105 0.96152 1.21422 1.00168 0.92779 1.00546 1.21443 0.99354 0.99206 0.95630 1.21445 0.98636 0.98422 0.96341 1.21334 1.00479 0.92114 1.00563 1.23552 0.96604 0.95084 1.02889 1.21464 0.94697 1.00820 0.92253 1.21473 1.00316 0.93514 0.98456 1.21471 0.99354 0.93704 0.97972 1.21170 0.98408 1.00417 0.93920 0.76504 0.85626 1.23343 1.20906 0.84901 0.83567 0.83409 0.85417 0.74654 0.88262 0.89268 0.85172 0.85040 0.85082 0.84814 0.84611 0.91439 0.88614 0.82510 0.82617 0.83725 0.84057 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.86 12.83 -148.98 -1.91 -2.77 16 2 C -0.08 0.15 2.80 71.23 0.20 0.34 16 3 Si 0.76 -1.96 29.87 68.60 2.05 0.09 16 4 C -0.12 0.18 5.36 -19.82 -0.11 0.07 16 5 C -0.10 0.15 9.67 22.24 0.21 0.36 16 6 C -0.11 0.26 9.43 22.49 0.21 0.47 16 7 C -0.06 0.07 5.88 -20.05 -0.12 -0.05 16 8 C -0.02 0.02 5.88 -20.00 -0.12 -0.10 16 9 C -0.12 0.01 9.41 22.44 0.21 0.22 16 10 C -0.07 -0.23 9.58 22.49 0.22 -0.01 16 11 C -0.15 -0.34 5.88 -20.06 -0.12 -0.45 16 12 C 0.56 3.13 7.77 86.75 0.67 3.81 16 13 O -0.58 -8.37 15.93 -3.95 -0.06 -8.43 16 14 N -0.69 0.88 5.21 -443.02 -2.31 -1.43 16 15 C 0.11 -0.06 4.32 45.52 0.20 0.14 16 16 H 0.09 0.36 7.46 -2.38 -0.02 0.34 16 17 C -0.12 0.54 7.29 31.12 0.23 0.77 16 18 C -0.06 0.26 3.86 -11.01 -0.04 0.21 16 19 H 0.11 -0.78 8.10 -2.39 -0.02 -0.80 16 20 C -0.08 0.03 5.29 -19.87 -0.11 -0.08 16 21 C -0.13 -0.08 8.63 22.27 0.19 0.12 16 22 C -0.13 -0.15 10.05 22.27 0.22 0.07 16 23 C -0.14 -0.16 10.05 22.27 0.22 0.07 16 24 C -0.13 -0.07 10.05 22.27 0.22 0.16 16 25 C -0.13 0.03 9.71 22.27 0.22 0.25 16 26 C -0.14 0.19 7.25 31.12 0.23 0.42 16 27 C -0.07 0.28 9.52 22.49 0.21 0.49 16 28 C -0.12 0.45 9.41 22.44 0.21 0.67 16 29 C -0.11 0.23 9.43 22.49 0.21 0.44 16 30 C -0.12 0.31 8.65 22.24 0.19 0.50 16 31 H 0.39 -1.45 8.70 -74.06 -0.64 -2.09 16 32 H 0.13 -0.42 7.96 -2.39 -0.02 -0.44 16 33 H -0.30 -1.69 7.11 99.48 0.71 -0.99 16 34 H -0.28 -0.30 7.00 99.48 0.70 0.40 16 35 H 0.13 -0.36 8.06 -2.91 -0.02 -0.38 16 36 H 0.15 -1.00 6.19 -2.91 -0.02 -1.02 16 37 H 0.15 -0.58 6.19 -2.91 -0.02 -0.60 16 38 H 0.13 0.63 7.64 -2.91 -0.02 0.60 16 39 H 0.41 -3.20 6.72 -92.71 -0.62 -3.82 16 40 H 0.10 -0.39 7.73 -2.39 -0.02 -0.41 16 41 H 0.09 -0.57 8.14 -2.39 -0.02 -0.59 16 42 H 0.13 -0.24 6.64 -2.91 -0.02 -0.26 16 43 H 0.13 -0.24 8.06 -2.91 -0.02 -0.26 16 44 H 0.13 -0.25 8.06 -2.91 -0.02 -0.28 16 45 H 0.13 -0.38 8.06 -2.91 -0.02 -0.41 16 46 H 0.14 -0.57 8.06 -2.91 -0.02 -0.60 16 47 H 0.07 0.03 8.14 -2.39 -0.02 0.01 16 48 H 0.10 -0.12 6.30 -2.39 -0.02 -0.14 16 49 H 0.16 -1.67 6.39 -2.91 -0.02 -1.69 16 50 H 0.16 -1.37 6.19 -2.91 -0.02 -1.39 16 51 H 0.15 -0.82 6.19 -2.91 -0.02 -0.84 16 52 H 0.14 -0.79 4.82 -2.91 -0.01 -0.81 16 Total: 0.00 -21.29 422.88 1.19 -20.11 By element: Atomic # 1 Polarization: -16.20 SS G_CDS: -0.26 Total: -16.45 kcal Atomic # 6 Polarization: 5.22 SS G_CDS: 3.68 Total: 8.89 kcal Atomic # 7 Polarization: 0.88 SS G_CDS: -2.31 Total: -1.43 kcal Atomic # 8 Polarization: -9.23 SS G_CDS: -1.97 Total: -11.20 kcal Atomic # 14 Polarization: -1.96 SS G_CDS: 2.05 Total: 0.09 kcal Total: -21.29 1.19 -20.11 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705150_13158362.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 68.099 kcal (2) G-P(sol) polarization free energy of solvation -21.295 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 46.804 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.189 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.106 kcal (6) G-S(sol) free energy of system = (1) + (5) 47.993 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds