Wall clock time and date at job start Tue Mar 9 2021 13:46:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86298 * 109.47014 * 2 1 4 4 C 1.50703 * 109.47027 * 119.99835 * 2 1 3 5 5 C 1.38562 * 120.32393 * 245.00698 * 4 2 1 6 6 N 1.31519 * 120.90437 * 179.97438 * 5 4 2 7 7 C 1.32721 * 121.64343 * 359.97438 * 6 5 4 8 8 C 1.48168 * 119.72302 * 179.97438 * 7 6 5 9 9 O 1.21519 * 119.99953 * 180.02562 * 8 7 6 10 10 N 1.34771 * 119.99999 * 0.02562 * 8 7 6 11 11 C 1.46503 * 119.99651 * 179.97438 * 10 8 7 12 12 H 1.08997 * 112.85425 * 23.80841 * 11 10 8 13 13 C 1.53783 * 113.61161 * 155.00378 * 11 10 8 14 14 C 1.53786 * 87.08128 * 89.11660 * 13 11 10 15 15 H 1.08996 * 113.61494 * 270.79832 * 14 13 11 16 16 C 1.50699 * 113.61618 * 139.97912 * 14 13 11 17 17 C 1.38233 * 120.00071 * 299.72877 * 16 14 13 18 18 C 1.38240 * 119.99915 * 179.74219 * 17 16 14 19 19 C 1.38236 * 119.99961 * 0.55208 * 18 17 16 20 20 C 1.38235 * 119.99694 * 359.70233 * 19 18 17 21 21 C 1.38233 * 120.00368 * 0.02562 * 20 19 18 22 22 C 1.53779 * 113.61586 * 252.50032 * 11 10 8 23 23 C 1.39314 * 120.55175 * 0.02562 * 7 6 5 24 24 C 1.38591 * 119.05868 * 0.23445 * 23 7 6 25 25 H 0.96703 * 113.99654 * 60.00596 * 1 2 3 26 26 H 1.08995 * 109.47436 * 239.99714 * 2 1 3 27 27 H 1.48497 * 110.00157 * 298.67713 * 3 2 1 28 28 H 1.48508 * 110.00054 * 59.99714 * 3 2 1 29 29 H 1.08003 * 119.54823 * 359.96843 * 5 4 2 30 30 H 0.96995 * 120.00301 * 0.02562 * 10 8 7 31 31 H 1.08997 * 113.61504 * 203.66345 * 13 11 10 32 32 H 1.09001 * 113.61448 * 334.48556 * 13 11 10 33 33 H 1.08001 * 119.99894 * 0.02562 * 17 16 14 34 34 H 1.07997 * 119.99763 * 180.27757 * 18 17 16 35 35 H 1.07999 * 119.99971 * 179.72521 * 19 18 17 36 36 H 1.08001 * 119.99507 * 179.97438 * 20 19 18 37 37 H 1.07997 * 119.99843 * 179.97438 * 21 20 19 38 38 H 1.08999 * 113.61421 * 25.43482 * 22 11 10 39 39 H 1.08999 * 113.61861 * 156.33965 * 22 11 10 40 40 H 1.08002 * 120.46654 * 179.97438 * 23 7 6 41 41 H 1.08001 * 120.75348 * 179.74927 * 24 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6409 -0.0171 2.1979 6 7 3.0842 -0.6255 3.2763 7 6 2.8719 -1.9193 3.4828 8 6 3.3911 -2.5618 4.7129 9 8 3.2001 -3.7461 4.9068 10 7 4.0752 -1.8327 5.6166 11 6 4.5880 -2.4679 6.8331 12 1 4.7297 -3.5429 6.7219 13 6 5.8028 -1.7460 7.4398 14 6 4.8001 -0.8988 8.2410 15 1 4.4776 0.0034 7.7214 16 6 5.2319 -0.6341 9.6603 17 6 5.4420 -1.6901 10.5272 18 6 5.8433 -1.4475 11.8276 19 6 6.0234 -0.1483 12.2644 20 6 5.8083 0.9079 11.3989 21 6 5.4124 0.6650 10.0969 22 6 3.8183 -2.0746 8.1049 23 6 2.1660 -2.6785 2.5522 24 6 1.6917 -2.0648 1.4036 25 1 -0.3933 0.4416 -0.7651 26 1 1.7924 -0.5138 -0.8899 27 1 1.5879 2.4585 -1.2242 28 1 1.5613 2.4679 1.2085 29 1 2.8328 1.0373 2.0644 30 1 4.2274 -0.8873 5.4621 31 1 6.4267 -2.3881 8.0615 32 1 6.3779 -1.1727 6.7127 33 1 5.2970 -2.7049 10.1872 34 1 6.0117 -2.2727 12.5036 35 1 6.3326 0.0414 13.2816 36 1 5.9486 1.9228 11.7403 37 1 5.2440 1.4903 9.4209 38 1 2.7904 -1.7654 7.9151 39 1 3.8996 -2.8065 8.9085 40 1 1.9944 -3.7313 2.7214 41 1 1.1446 -2.6281 0.6621 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705150_13287726.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:46:22 Heat of formation + Delta-G solvation = 28.543335 kcal Electronic energy + Delta-G solvation = -24073.268205 eV Core-core repulsion = 20499.520652 eV Total energy + Delta-G solvation = -3573.747553 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 311.131 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -41.93076 -41.22891 -39.96813 -38.65861 -38.01939 -34.74933 -33.72174 -32.99787 -31.85040 -31.51118 -28.03881 -26.73978 -26.06657 -25.01196 -23.97349 -23.41093 -22.42720 -21.87142 -20.10254 -19.27873 -18.77079 -18.17226 -17.91097 -16.95590 -16.87800 -16.33320 -16.17731 -16.13358 -15.92094 -15.58492 -15.23893 -15.04286 -14.67406 -14.57125 -14.27826 -14.21398 -14.06972 -14.00564 -13.97364 -13.49033 -13.07216 -12.73649 -12.60083 -12.18383 -12.13703 -11.74968 -11.69830 -11.32350 -11.16343 -11.06394 -10.80087 -10.57651 -10.29831 -10.01599 -9.77928 -9.52164 -5.13404 -0.54914 0.08682 0.46629 0.53779 1.05763 1.43207 1.63774 1.79391 1.98835 2.66200 2.86699 2.93191 3.14924 3.44706 3.53155 3.63690 3.68290 3.72775 3.75779 3.88104 3.92033 4.04415 4.14378 4.18067 4.21614 4.23068 4.28346 4.54794 4.57343 4.63049 4.68041 4.71706 4.78257 4.89682 4.95824 4.98008 5.00522 5.12731 5.14873 5.18875 5.36925 5.54898 5.61688 5.67422 5.76788 6.13743 6.22438 6.35231 6.65189 7.16293 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.076 4.076 3 Si 0.683 3.317 4 C -0.102 4.102 5 C 0.105 3.895 6 N -0.452 5.452 7 C 0.080 3.920 8 C 0.576 3.424 9 O -0.527 6.527 10 N -0.693 5.693 11 C 0.117 3.883 12 H 0.107 0.893 13 C -0.134 4.134 14 C -0.074 4.074 15 H 0.098 0.902 16 C -0.071 4.071 17 C -0.117 4.117 18 C -0.118 4.118 19 C -0.125 4.125 20 C -0.118 4.118 21 C -0.117 4.117 22 C -0.144 4.144 23 C -0.107 4.107 24 C -0.053 4.053 25 H 0.384 0.616 26 H 0.084 0.916 27 H -0.255 1.255 28 H -0.250 1.250 29 H 0.165 0.835 30 H 0.412 0.588 31 H 0.099 0.901 32 H 0.078 0.922 33 H 0.123 0.877 34 H 0.122 0.878 35 H 0.121 0.879 36 H 0.121 0.879 37 H 0.121 0.879 38 H 0.074 0.926 39 H 0.097 0.903 40 H 0.153 0.847 41 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.255 2.650 -2.958 4.567 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.186 4.186 3 Si 0.583 3.417 4 C -0.104 4.104 5 C -0.054 4.054 6 N -0.163 5.163 7 C -0.058 4.058 8 C 0.361 3.639 9 O -0.402 6.402 10 N -0.344 5.344 11 C 0.011 3.989 12 H 0.125 0.875 13 C -0.172 4.172 14 C -0.092 4.092 15 H 0.116 0.884 16 C -0.071 4.071 17 C -0.135 4.135 18 C -0.136 4.136 19 C -0.143 4.143 20 C -0.136 4.136 21 C -0.135 4.135 22 C -0.182 4.182 23 C -0.128 4.128 24 C -0.078 4.078 25 H 0.233 0.767 26 H 0.102 0.898 27 H -0.180 1.180 28 H -0.174 1.174 29 H 0.181 0.819 30 H 0.249 0.751 31 H 0.118 0.882 32 H 0.097 0.903 33 H 0.141 0.859 34 H 0.140 0.860 35 H 0.139 0.861 36 H 0.139 0.861 37 H 0.139 0.861 38 H 0.093 0.907 39 H 0.115 0.885 40 H 0.171 0.829 41 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges 2.482 2.761 -1.595 4.041 hybrid contribution -1.579 -0.030 -1.217 1.994 sum 0.903 2.731 -2.812 4.022 Atomic orbital electron populations 1.86584 1.17267 1.80300 1.50078 1.24731 0.84917 1.11362 0.97587 0.95058 0.91407 0.74169 0.81023 1.20525 0.98540 0.94936 0.96436 1.22598 0.94426 0.99861 0.88516 1.67532 1.18416 1.09433 1.20967 1.21138 0.98650 0.90309 0.95730 1.17832 0.78042 0.85909 0.82089 1.90818 1.57583 1.14836 1.76987 1.45489 1.55120 1.13797 1.20013 1.21923 0.94591 0.98820 0.83518 0.87459 1.23417 0.96040 0.98731 0.99025 1.21605 0.97016 0.98244 0.92377 0.88374 1.19691 0.99160 0.93263 0.95014 1.21026 1.00014 0.98861 0.93634 1.21179 0.99401 0.96988 0.96006 1.21197 1.00368 0.92895 0.99815 1.21184 0.99404 0.99195 0.93852 1.21080 1.00037 0.96268 0.96083 1.23570 0.99116 0.97784 0.97750 1.22208 0.95331 1.02336 0.92921 1.21538 0.95634 0.93817 0.96846 0.76710 0.89816 1.18010 1.17399 0.81873 0.75094 0.88244 0.90306 0.85936 0.86018 0.86115 0.86060 0.86134 0.90680 0.88507 0.82905 0.83576 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.24 12.82 -35.23 -0.45 -0.21 16 2 C -0.08 0.14 2.81 36.01 0.10 0.24 16 3 Si 0.68 -1.78 29.87 -169.99 -5.08 -6.86 16 4 C -0.10 0.01 5.40 -104.36 -0.56 -0.56 16 5 C 0.11 0.02 9.84 -17.57 -0.17 -0.16 16 6 N -0.45 -0.67 9.54 -9.80 -0.09 -0.77 16 7 C 0.08 0.18 6.75 -83.00 -0.56 -0.38 16 8 C 0.58 1.85 7.81 -12.18 -0.10 1.75 16 9 O -0.53 -3.17 15.92 5.35 0.09 -3.09 16 10 N -0.69 -0.59 5.25 -53.86 -0.28 -0.87 16 11 C 0.12 0.02 4.32 -67.12 -0.29 -0.27 16 12 H 0.11 0.15 7.46 -51.93 -0.39 -0.24 16 13 C -0.13 0.16 7.29 -25.92 -0.19 -0.03 16 14 C -0.07 0.05 3.86 -90.96 -0.35 -0.30 16 15 H 0.10 -0.12 8.09 -51.93 -0.42 -0.54 16 16 C -0.07 -0.05 5.29 -104.62 -0.55 -0.60 16 17 C -0.12 -0.08 8.62 -39.58 -0.34 -0.42 16 18 C -0.12 -0.10 10.05 -39.58 -0.40 -0.49 16 19 C -0.12 -0.11 10.05 -39.58 -0.40 -0.51 16 20 C -0.12 -0.11 10.05 -39.58 -0.40 -0.51 16 21 C -0.12 -0.10 9.71 -39.58 -0.38 -0.49 16 22 C -0.14 0.02 7.25 -25.92 -0.19 -0.17 16 23 C -0.11 -0.15 9.63 -39.05 -0.38 -0.52 16 24 C -0.05 -0.01 9.84 -39.31 -0.39 -0.39 16 25 H 0.38 -1.68 8.74 45.56 0.40 -1.28 16 26 H 0.08 -0.31 7.96 -51.93 -0.41 -0.73 16 27 H -0.26 0.13 7.11 56.52 0.40 0.53 16 28 H -0.25 -0.10 7.05 56.52 0.40 0.30 16 29 H 0.16 -0.34 4.88 -52.48 -0.26 -0.60 16 30 H 0.41 -0.20 8.03 -40.82 -0.33 -0.52 16 31 H 0.10 -0.14 7.73 -51.93 -0.40 -0.55 16 32 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 33 H 0.12 -0.10 6.64 -52.49 -0.35 -0.45 16 34 H 0.12 -0.10 8.06 -52.49 -0.42 -0.52 16 35 H 0.12 -0.08 8.06 -52.49 -0.42 -0.50 16 36 H 0.12 -0.09 8.06 -52.49 -0.42 -0.51 16 37 H 0.12 -0.07 8.05 -52.49 -0.42 -0.50 16 38 H 0.07 0.07 8.14 -51.93 -0.42 -0.36 16 39 H 0.10 -0.06 6.30 -51.93 -0.33 -0.38 16 40 H 0.15 0.13 7.64 -52.49 -0.40 -0.27 16 41 H 0.15 -0.23 8.06 -52.49 -0.42 -0.65 16 LS Contribution 346.19 15.07 5.22 5.22 Total: 0.00 -7.49 346.19 -11.19 -18.68 By element: Atomic # 1 Polarization: -3.26 SS G_CDS: -5.05 Total: -8.31 kcal Atomic # 6 Polarization: 1.75 SS G_CDS: -5.54 Total: -3.79 kcal Atomic # 7 Polarization: -1.26 SS G_CDS: -0.38 Total: -1.64 kcal Atomic # 8 Polarization: -2.94 SS G_CDS: -0.37 Total: -3.30 kcal Atomic # 14 Polarization: -1.78 SS G_CDS: -5.08 Total: -6.86 kcal Total LS contribution 5.22 Total: 5.22 kcal Total: -7.49 -11.19 -18.68 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705150_13287726.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 47.228 kcal (2) G-P(sol) polarization free energy of solvation -7.492 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 39.736 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.192 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.684 kcal (6) G-S(sol) free energy of system = (1) + (5) 28.543 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds