Wall clock time and date at job start Tue Mar 9 2021 13:46:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.36411 * 125.80267 * 2 1 4 4 C 1.47375 * 127.19550 * 0.05157 * 3 2 1 5 5 O 1.21617 * 119.99784 * 359.97438 * 4 3 2 6 6 N 1.34771 * 120.00307 * 179.97438 * 4 3 2 7 7 C 1.46502 * 120.00092 * 179.97438 * 6 4 3 8 8 H 1.09003 * 112.85160 * 23.80720 * 7 6 4 9 9 C 1.53779 * 113.61268 * 155.00122 * 7 6 4 10 10 C 1.53777 * 87.08406 * 89.11570 * 9 7 6 11 11 H 1.08994 * 113.61558 * 270.88603 * 10 9 7 12 12 C 1.50703 * 113.61432 * 139.97766 * 10 9 7 13 13 C 1.38233 * 120.00078 * 299.72912 * 12 10 9 14 14 C 1.38232 * 119.99753 * 179.74343 * 13 12 10 15 15 C 1.38231 * 120.00112 * 0.55456 * 14 13 12 16 16 C 1.38234 * 119.99812 * 359.70062 * 15 14 13 17 17 C 1.38226 * 120.00098 * 0.02562 * 16 15 14 18 18 C 1.53773 * 113.61474 * 252.49641 * 7 6 4 19 19 C 1.47020 * 105.61474 * 180.02562 * 3 2 1 20 20 C 1.34184 * 105.95357 * 359.97438 * 19 3 2 21 21 C 1.50700 * 125.43720 * 179.97438 * 20 19 3 22 22 O 1.42903 * 109.47013 * 65.00047 * 21 20 19 23 23 Si 1.86301 * 109.47067 * 185.00051 * 21 20 19 24 24 O 1.33658 * 125.79718 * 180.02562 * 2 1 3 25 25 H 1.08996 * 109.47763 * 179.97438 * 1 2 3 26 26 H 1.09003 * 109.47221 * 299.95358 * 1 2 3 27 27 H 1.09000 * 109.47096 * 59.95447 * 1 2 3 28 28 H 0.97006 * 119.99926 * 0.02562 * 6 4 3 29 29 H 1.09005 * 113.61321 * 203.66469 * 9 7 6 30 30 H 1.09000 * 113.61568 * 334.48366 * 9 7 6 31 31 H 1.07998 * 119.99891 * 0.02562 * 13 12 10 32 32 H 1.08010 * 119.99920 * 180.27238 * 14 13 12 33 33 H 1.08005 * 119.99879 * 179.72031 * 15 14 13 34 34 H 1.08007 * 119.99509 * 180.02562 * 16 15 14 35 35 H 1.08003 * 120.00358 * 179.97438 * 17 16 15 36 36 H 1.09003 * 113.61982 * 25.43450 * 18 7 6 37 37 H 1.09001 * 113.61711 * 156.33382 * 18 7 6 38 38 H 1.07999 * 127.02375 * 180.26023 * 19 3 2 39 39 H 1.09003 * 109.46973 * 305.00242 * 21 20 19 40 40 H 0.96704 * 113.99814 * 179.97438 * 22 21 20 41 41 H 1.48501 * 109.99970 * 178.68003 * 23 21 20 42 42 H 1.48497 * 109.99746 * 300.00020 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3050 1.1063 0.0000 4 6 1.8741 2.5157 0.0011 5 8 0.6891 2.7892 0.0016 6 7 2.7931 3.5014 0.0014 7 6 2.3647 4.9024 0.0019 8 1 1.3621 5.0383 0.4074 9 6 3.4058 5.8647 0.5977 10 6 3.9880 5.9877 -0.8202 11 1 4.7505 5.2421 -1.0454 12 6 4.4131 7.3884 -1.1788 13 6 3.4853 8.4131 -1.1812 14 6 3.8764 9.6988 -1.5049 15 6 5.1929 9.9577 -1.8374 16 6 6.1196 8.9320 -1.8401 17 6 5.7297 7.6474 -1.5109 18 6 2.5898 5.6159 -1.3416 19 6 3.6849 0.5990 -0.0006 20 6 3.5858 -0.7392 -0.0004 21 6 4.7458 -1.7012 -0.0014 22 8 5.4771 -1.5669 1.2190 23 14 4.1066 -3.4445 -0.1536 24 8 2.2888 -1.0841 -0.0005 25 1 -0.3634 -1.0276 -0.0005 26 1 -0.3634 0.5131 0.8904 27 1 -0.3633 0.5145 -0.8896 28 1 3.7383 3.2833 0.0006 29 1 2.9766 6.7927 0.9756 30 1 4.0819 5.3905 1.3091 31 1 2.4558 8.2099 -0.9257 32 1 3.1524 10.5003 -1.5025 33 1 5.4975 10.9614 -2.0947 34 1 7.1484 9.1344 -2.0995 35 1 6.4537 6.8459 -1.5134 36 1 2.6082 4.9405 -2.1970 37 1 1.9377 6.4758 -1.4940 38 1 4.5928 1.1838 0.0031 39 1 5.4009 -1.4795 -0.8438 40 1 6.2395 -2.1578 1.2877 41 1 5.2422 -4.4007 -0.1878 42 1 3.2120 -3.7590 0.9891 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705150_13308374.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:46:48 Heat of formation + Delta-G solvation = 2.644909 kcal Electronic energy + Delta-G solvation = -25063.646191 eV Core-core repulsion = 21363.745458 eV Total energy + Delta-G solvation = -3699.900733 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 314.135 amu Computer time = 0.48 seconds Orbital eigenvalues (eV) -43.69612 -41.47727 -40.05591 -38.62358 -38.14429 -34.65954 -33.90308 -33.16600 -31.87670 -31.53791 -29.47671 -26.75573 -26.57629 -25.53887 -24.21417 -23.48593 -22.60275 -22.01810 -20.68030 -19.95674 -18.92883 -18.51331 -17.95285 -17.26394 -17.04124 -16.88780 -16.22729 -16.16871 -15.94089 -15.69665 -15.64231 -14.97833 -14.90390 -14.52918 -14.26842 -14.15394 -14.14710 -13.97026 -13.94032 -13.82596 -13.50681 -13.14645 -13.08005 -12.76071 -12.62236 -12.19568 -12.11455 -11.76405 -11.71430 -11.18849 -10.99507 -10.84037 -10.67002 -10.04163 -9.80456 -9.55367 -9.50229 -5.03476 0.34321 0.44277 0.51340 0.84683 1.08799 1.35811 1.66386 1.90883 2.15936 2.39047 2.84339 3.16707 3.41909 3.43081 3.66342 3.68473 3.76144 3.79985 3.90804 4.02007 4.08740 4.11921 4.18488 4.20110 4.25495 4.43408 4.55502 4.60631 4.62710 4.64797 4.68908 4.70418 4.77466 4.86809 4.93596 4.98875 5.10606 5.11944 5.14582 5.16400 5.25009 5.56659 5.60022 5.65200 5.74432 5.98005 6.11288 6.21134 6.53652 7.28198 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 C 0.097 3.903 3 C -0.254 4.254 4 C 0.596 3.404 5 O -0.537 6.537 6 N -0.707 5.707 7 C 0.121 3.879 8 H 0.107 0.893 9 C -0.136 4.136 10 C -0.074 4.074 11 H 0.096 0.904 12 C -0.072 4.072 13 C -0.117 4.117 14 C -0.117 4.117 15 C -0.125 4.125 16 C -0.118 4.118 17 C -0.117 4.117 18 C -0.144 4.144 19 C -0.146 4.146 20 C -0.009 4.009 21 C -0.037 4.037 22 O -0.534 6.534 23 Si 0.698 3.302 24 O -0.167 6.167 25 H 0.080 0.920 26 H 0.099 0.901 27 H 0.100 0.900 28 H 0.401 0.599 29 H 0.099 0.901 30 H 0.076 0.924 31 H 0.123 0.877 32 H 0.122 0.878 33 H 0.121 0.879 34 H 0.121 0.879 35 H 0.120 0.880 36 H 0.075 0.925 37 H 0.096 0.904 38 H 0.157 0.843 39 H 0.097 0.903 40 H 0.388 0.612 41 H -0.252 1.252 42 H -0.251 1.251 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.910 -0.984 -2.413 3.906 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.133 4.133 2 C 0.044 3.956 3 C -0.258 4.258 4 C 0.385 3.615 5 O -0.415 6.415 6 N -0.358 5.358 7 C 0.016 3.984 8 H 0.125 0.875 9 C -0.174 4.174 10 C -0.092 4.092 11 H 0.114 0.886 12 C -0.072 4.072 13 C -0.135 4.135 14 C -0.135 4.135 15 C -0.143 4.143 16 C -0.136 4.136 17 C -0.135 4.135 18 C -0.182 4.182 19 C -0.165 4.165 20 C -0.056 4.056 21 C -0.146 4.146 22 O -0.343 6.343 23 Si 0.597 3.403 24 O -0.064 6.064 25 H 0.099 0.901 26 H 0.117 0.883 27 H 0.118 0.882 28 H 0.236 0.764 29 H 0.117 0.883 30 H 0.095 0.905 31 H 0.141 0.859 32 H 0.140 0.860 33 H 0.139 0.861 34 H 0.139 0.861 35 H 0.138 0.862 36 H 0.093 0.907 37 H 0.114 0.886 38 H 0.175 0.825 39 H 0.115 0.885 40 H 0.238 0.762 41 H -0.176 1.176 42 H -0.175 1.175 Dipole moment (debyes) X Y Z Total from point charges 1.475 -1.441 -1.919 2.816 hybrid contribution 1.870 0.339 0.627 2.001 sum 3.344 -1.102 -1.292 3.751 Atomic orbital electron populations 1.20568 0.83179 1.04097 1.05501 1.22892 0.94051 0.82732 0.95929 1.21077 0.93192 0.93734 1.17787 1.17140 0.85383 0.83613 0.75388 1.90799 1.16477 1.84035 1.50179 1.45431 1.09652 1.05101 1.75625 1.21844 0.99719 0.79822 0.97044 0.87527 1.23428 0.97961 0.99921 0.96070 1.21590 0.97247 0.93709 0.96654 0.88579 1.19690 0.93572 0.94756 0.99137 1.21026 0.99433 0.92602 1.00447 1.21183 0.96281 0.96793 0.99286 1.21199 0.93582 0.99299 1.00177 1.21181 0.99662 0.93042 0.99744 1.21067 0.95568 0.96969 0.99920 1.23570 0.95984 1.00803 0.97851 1.22522 0.96440 0.93385 1.04202 1.20943 0.82092 0.94052 1.08559 1.23807 0.91732 1.09148 0.89932 1.86567 1.45524 1.64606 1.37554 0.94434 0.83033 0.72920 0.89917 1.83660 1.16213 1.35056 1.71465 0.90104 0.88295 0.88181 0.76429 0.88298 0.90515 0.85925 0.85991 0.86091 0.86056 0.86203 0.90675 0.88586 0.82544 0.88483 0.76237 1.17646 1.17478 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.02 9.14 36.01 0.33 0.31 16 2 C 0.10 0.22 7.37 -34.97 -0.26 -0.04 16 3 C -0.25 -0.63 6.31 -103.28 -0.65 -1.28 16 4 C 0.60 1.86 7.81 -12.54 -0.10 1.77 16 5 O -0.54 -3.12 15.26 5.26 0.08 -3.04 16 6 N -0.71 -0.31 5.26 -54.11 -0.28 -0.59 16 7 C 0.12 0.01 4.32 -67.12 -0.29 -0.28 16 8 H 0.11 0.16 7.46 -51.93 -0.39 -0.22 16 9 C -0.14 0.16 7.29 -25.92 -0.19 -0.03 16 10 C -0.07 0.07 3.86 -90.96 -0.35 -0.28 16 11 H 0.10 -0.17 8.10 -51.93 -0.42 -0.59 16 12 C -0.07 -0.03 5.29 -104.62 -0.55 -0.59 16 13 C -0.12 -0.06 8.62 -39.59 -0.34 -0.40 16 14 C -0.12 -0.08 10.05 -39.59 -0.40 -0.48 16 15 C -0.12 -0.10 10.05 -39.59 -0.40 -0.49 16 16 C -0.12 -0.09 10.05 -39.59 -0.40 -0.48 16 17 C -0.12 -0.08 9.71 -39.59 -0.38 -0.46 16 18 C -0.14 0.06 7.25 -25.92 -0.19 -0.13 16 19 C -0.15 -0.16 10.48 -37.45 -0.39 -0.56 16 20 C -0.01 -0.01 6.22 -35.74 -0.22 -0.23 16 21 C -0.04 0.03 2.96 36.01 0.11 0.14 16 22 O -0.53 0.01 12.86 -35.23 -0.45 -0.44 16 23 Si 0.70 -0.80 32.09 -169.99 -5.46 -6.25 16 24 O -0.17 -0.37 8.90 7.66 0.07 -0.30 16 25 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 26 H 0.10 0.06 8.08 -51.93 -0.42 -0.36 16 27 H 0.10 0.01 8.08 -51.93 -0.42 -0.41 16 28 H 0.40 -0.64 7.87 -40.82 -0.32 -0.97 16 29 H 0.10 -0.13 7.73 -51.93 -0.40 -0.53 16 30 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 31 H 0.12 -0.11 6.64 -52.49 -0.35 -0.45 16 32 H 0.12 -0.11 8.06 -52.48 -0.42 -0.53 16 33 H 0.12 -0.10 8.06 -52.48 -0.42 -0.52 16 34 H 0.12 -0.11 8.06 -52.48 -0.42 -0.53 16 35 H 0.12 -0.11 8.06 -52.48 -0.42 -0.53 16 36 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 37 H 0.10 -0.07 6.30 -51.93 -0.33 -0.40 16 38 H 0.16 -0.19 7.74 -52.49 -0.41 -0.59 16 39 H 0.10 -0.34 7.96 -51.93 -0.41 -0.76 16 40 H 0.39 -1.71 8.74 45.56 0.40 -1.31 16 41 H -0.25 0.00 7.11 56.52 0.40 0.40 16 42 H -0.25 -0.72 7.11 56.52 0.40 -0.32 16 LS Contribution 356.74 15.07 5.38 5.38 Total: 0.00 -7.89 356.74 -10.97 -18.86 By element: Atomic # 1 Polarization: -4.48 SS G_CDS: -5.62 Total: -10.10 kcal Atomic # 6 Polarization: 1.17 SS G_CDS: -4.68 Total: -3.51 kcal Atomic # 7 Polarization: -0.31 SS G_CDS: -0.28 Total: -0.59 kcal Atomic # 8 Polarization: -3.48 SS G_CDS: -0.30 Total: -3.79 kcal Atomic # 14 Polarization: -0.80 SS G_CDS: -5.46 Total: -6.25 kcal Total LS contribution 5.38 Total: 5.38 kcal Total: -7.89 -10.97 -18.86 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705150_13308374.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 21.504 kcal (2) G-P(sol) polarization free energy of solvation -7.890 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 13.614 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.969 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.859 kcal (6) G-S(sol) free energy of system = (1) + (5) 2.645 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.48 seconds