Wall clock time and date at job start Tue Mar 9 2021 13:46:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86298 * 109.47725 * 2 1 4 4 C 1.50705 * 109.47171 * 240.00020 * 2 1 3 5 5 C 1.38056 * 119.80193 * 299.72826 * 4 2 1 6 6 C 1.38713 * 120.08095 * 179.76377 * 5 4 2 7 7 O 1.35656 * 120.14924 * 180.27359 * 6 5 4 8 8 C 1.40132 * 119.70112 * 0.50541 * 6 5 4 9 9 C 1.47533 * 120.19307 * 179.76766 * 8 6 5 10 10 O 1.21592 * 119.99987 * 359.97438 * 9 8 6 11 11 N 1.34780 * 119.99933 * 179.97438 * 9 8 6 12 12 C 1.46498 * 119.99521 * 180.02562 * 11 9 8 13 13 H 1.08998 * 112.85724 * 23.80787 * 12 11 9 14 14 C 1.53785 * 113.61383 * 155.00386 * 12 11 9 15 15 C 1.53783 * 87.08079 * 89.11588 * 14 12 11 16 16 H 1.08998 * 113.61067 * 270.88374 * 15 14 12 17 17 C 1.50698 * 113.61436 * 139.98509 * 15 14 12 18 18 C 1.38233 * 119.99897 * 299.72943 * 17 15 14 19 19 C 1.38240 * 119.99973 * 179.76666 * 18 17 15 20 20 C 1.38232 * 119.99707 * 0.47903 * 19 18 17 21 21 C 1.38236 * 120.00406 * 359.79792 * 20 19 18 22 22 C 1.38237 * 119.99828 * 359.94678 * 21 20 19 23 23 C 1.53775 * 87.08121 * 25.43378 * 15 14 12 24 24 C 1.39708 * 119.61805 * 359.74767 * 8 6 5 25 25 C 1.37795 * 119.90355 * 0.02562 * 24 8 6 26 26 H 0.96709 * 113.99337 * 300.00145 * 1 2 3 27 27 H 1.09004 * 109.47533 * 120.00158 * 2 1 3 28 28 H 1.48506 * 109.99834 * 300.00610 * 3 2 1 29 29 H 1.48502 * 110.00011 * 61.31874 * 3 2 1 30 30 H 1.07997 * 119.95926 * 0.02562 * 5 4 2 31 31 H 0.96702 * 113.99797 * 270.23780 * 7 6 5 32 32 H 0.96993 * 120.00174 * 0.02562 * 11 9 8 33 33 H 1.08997 * 113.61675 * 203.66326 * 14 12 11 34 34 H 1.09006 * 113.61062 * 334.48446 * 14 12 11 35 35 H 1.07997 * 119.99929 * 359.97438 * 18 17 15 36 36 H 1.07999 * 120.00131 * 180.24634 * 19 18 17 37 37 H 1.08007 * 119.99722 * 179.76674 * 20 19 18 38 38 H 1.07993 * 120.00266 * 179.97438 * 21 20 19 39 39 H 1.07997 * 120.00198 * 180.02562 * 22 21 20 40 40 H 1.09002 * 113.61503 * 220.01674 * 23 15 14 41 41 H 1.09003 * 113.61558 * 89.11627 * 23 15 14 42 42 H 1.07996 * 120.04921 * 180.02562 * 24 8 6 43 43 H 1.08005 * 119.84616 * 180.02562 * 25 24 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.5999 -2.0338 -1.4421 6 6 2.0551 -2.6919 -2.5751 7 8 1.7257 -3.9907 -2.7872 8 6 2.8607 -2.0105 -3.4973 9 6 3.3550 -2.7014 -4.7035 10 8 3.0640 -3.8656 -4.8995 11 7 4.1292 -2.0422 -5.5881 12 6 4.6196 -2.7282 -6.7861 13 1 3.9982 -3.5768 -7.0722 14 6 4.9397 -1.7782 -7.9523 15 6 6.3586 -1.6680 -7.3697 16 1 6.4692 -0.8677 -6.6380 17 6 7.4422 -1.6589 -8.4171 18 6 7.5870 -2.7362 -9.2710 19 6 8.5779 -2.7258 -10.2349 20 6 9.4302 -1.6424 -10.3383 21 6 9.2890 -0.5676 -9.4806 22 6 8.2948 -0.5757 -8.5201 23 6 6.1225 -3.0507 -6.7396 24 6 3.1928 -0.6730 -3.2681 25 6 2.7279 -0.0334 -2.1395 26 1 -0.3932 0.4418 0.7651 27 1 1.7924 -0.5139 0.8900 28 1 1.5615 2.4679 -1.2085 29 1 1.5881 2.4585 1.2242 30 1 0.9821 -2.5561 -0.7267 31 1 2.3515 -4.6223 -2.4069 32 1 4.3617 -1.1136 -5.4316 33 1 4.9052 -2.2595 -8.9297 34 1 4.3794 -0.8437 -7.9206 35 1 6.9239 -3.5845 -9.1874 36 1 8.6885 -3.5658 -10.9047 37 1 10.2067 -1.6360 -11.0889 38 1 9.9551 0.2786 -9.5610 39 1 8.1842 0.2642 -7.8503 40 1 6.5182 -3.1429 -5.7281 41 1 6.4113 -3.8799 -7.3854 42 1 3.8128 -0.1410 -3.9744 43 1 2.9849 1.0007 -1.9635 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705150_13422076.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:46:57 Heat of formation + Delta-G solvation = -21.886079 kcal Electronic energy + Delta-G solvation = -26342.047461 eV Core-core repulsion = 22512.856843 eV Total energy + Delta-G solvation = -3829.190617 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 326.135 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -41.82343 -41.06042 -39.80401 -38.72457 -38.19590 -37.29441 -34.63156 -32.89084 -31.86211 -31.43206 -31.09977 -27.71524 -26.77916 -26.04371 -23.88183 -23.80597 -23.32681 -22.41214 -21.65124 -20.17531 -19.27075 -18.76203 -18.57247 -17.97498 -17.49549 -16.76794 -16.70005 -16.32141 -16.12408 -15.94978 -15.82951 -15.64461 -15.27280 -14.95988 -14.82695 -14.42718 -14.27562 -14.08990 -14.06145 -13.94278 -13.55916 -13.38286 -13.10305 -13.03396 -12.76011 -12.47331 -12.21312 -12.11275 -11.78101 -11.73464 -11.62653 -11.20023 -10.77262 -10.67155 -10.13955 -9.99984 -9.81633 -9.76242 -9.55748 -5.08581 -0.38784 0.13258 0.42992 0.50230 1.12724 1.48955 1.77101 1.85280 2.03567 2.57446 2.83067 3.03708 3.23048 3.40100 3.53805 3.62982 3.66386 3.68739 3.72446 3.88205 4.00302 4.03325 4.10849 4.17749 4.19269 4.22816 4.24549 4.53011 4.55590 4.59319 4.65625 4.68637 4.71548 4.79590 4.91443 4.95545 4.97492 5.06884 5.10939 5.14461 5.16184 5.23971 5.52714 5.55045 5.58355 5.64222 5.72750 6.10170 6.30199 6.46051 6.73425 7.23876 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.083 4.083 3 Si 0.685 3.315 4 C -0.029 4.029 5 C -0.128 4.128 6 C 0.174 3.826 7 O -0.476 6.476 8 C -0.165 4.165 9 C 0.562 3.438 10 O -0.516 6.516 11 N -0.711 5.711 12 C 0.120 3.880 13 H 0.107 0.893 14 C -0.136 4.136 15 C -0.073 4.073 16 H 0.097 0.903 17 C -0.072 4.072 18 C -0.117 4.117 19 C -0.117 4.117 20 C -0.124 4.124 21 C -0.118 4.118 22 C -0.117 4.117 23 C -0.143 4.143 24 C -0.064 4.064 25 C -0.133 4.133 26 H 0.383 0.617 27 H 0.082 0.918 28 H -0.253 1.253 29 H -0.259 1.259 30 H 0.139 0.861 31 H 0.398 0.602 32 H 0.399 0.601 33 H 0.099 0.901 34 H 0.076 0.924 35 H 0.123 0.877 36 H 0.122 0.878 37 H 0.121 0.879 38 H 0.122 0.878 39 H 0.120 0.880 40 H 0.075 0.925 41 H 0.096 0.904 42 H 0.135 0.865 43 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.747 3.718 2.406 6.492 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.192 4.192 3 Si 0.586 3.414 4 C -0.030 4.030 5 C -0.147 4.147 6 C 0.127 3.873 7 O -0.287 6.287 8 C -0.169 4.169 9 C 0.350 3.650 10 O -0.391 6.391 11 N -0.364 5.364 12 C 0.015 3.985 13 H 0.125 0.875 14 C -0.174 4.174 15 C -0.092 4.092 16 H 0.115 0.885 17 C -0.072 4.072 18 C -0.135 4.135 19 C -0.135 4.135 20 C -0.142 4.142 21 C -0.136 4.136 22 C -0.135 4.135 23 C -0.182 4.182 24 C -0.083 4.083 25 C -0.151 4.151 26 H 0.231 0.769 27 H 0.100 0.900 28 H -0.177 1.177 29 H -0.184 1.184 30 H 0.157 0.843 31 H 0.256 0.744 32 H 0.235 0.765 33 H 0.117 0.883 34 H 0.095 0.905 35 H 0.141 0.859 36 H 0.140 0.860 37 H 0.139 0.861 38 H 0.140 0.860 39 H 0.138 0.862 40 H 0.093 0.907 41 H 0.114 0.886 42 H 0.152 0.848 43 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 3.924 3.604 1.408 5.511 hybrid contribution -0.543 0.191 0.808 0.992 sum 3.382 3.795 2.216 5.545 Atomic orbital electron populations 1.86599 1.17352 1.80250 1.49930 1.24900 0.84913 1.11320 0.98071 0.95091 0.91504 0.74189 0.80624 1.19328 0.95596 0.93345 0.94706 1.21322 1.01115 0.94902 0.97315 1.18476 0.91756 0.85924 0.91149 1.84774 1.51621 1.12371 1.79917 1.20385 1.03050 0.95640 0.97803 1.18031 0.77998 0.86396 0.82603 1.90836 1.56653 1.16010 1.75615 1.45578 1.52382 1.15466 1.22965 1.21852 0.95305 0.96566 0.84777 0.87548 1.23433 0.95199 1.00349 0.98402 1.21591 0.92786 0.98770 0.96026 0.88525 1.19684 0.96420 0.94415 0.96682 1.21029 0.98643 0.98239 0.95602 1.21185 0.95514 0.98492 0.98350 1.21202 0.99502 0.94101 0.99433 1.21184 0.98237 0.98560 0.95647 1.21068 0.95505 0.98079 0.98850 1.23569 0.95767 0.96873 1.01974 1.21107 0.97745 0.92687 0.96766 1.20871 0.99818 0.99972 0.94397 0.76893 0.89998 1.17715 1.18437 0.84285 0.74399 0.76516 0.88291 0.90484 0.85940 0.86001 0.86095 0.86046 0.86166 0.90675 0.88591 0.84772 0.84627 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.27 12.74 -35.23 -0.45 -0.72 16 2 C -0.08 0.10 2.80 36.01 0.10 0.20 16 3 Si 0.69 -1.49 29.77 -169.99 -5.06 -6.55 16 4 C -0.03 -0.01 5.43 -104.58 -0.57 -0.57 16 5 C -0.13 -0.17 9.53 -39.47 -0.38 -0.55 16 6 C 0.17 0.42 6.72 -38.70 -0.26 0.16 16 7 O -0.48 -1.52 11.58 -40.55 -0.47 -1.99 16 8 C -0.17 -0.24 5.89 -104.85 -0.62 -0.86 16 9 C 0.56 1.49 7.76 -12.47 -0.10 1.39 16 10 O -0.52 -3.25 14.76 -16.59 -0.24 -3.50 16 11 N -0.71 0.33 5.21 -54.05 -0.28 0.05 16 12 C 0.12 -0.04 4.32 -67.12 -0.29 -0.33 16 13 H 0.11 0.16 7.46 -51.93 -0.39 -0.23 16 14 C -0.14 0.23 7.29 -25.92 -0.19 0.04 16 15 C -0.07 0.12 3.86 -90.96 -0.35 -0.23 16 16 H 0.10 -0.26 8.10 -51.93 -0.42 -0.68 16 17 C -0.07 0.00 5.29 -104.62 -0.55 -0.55 16 18 C -0.12 -0.03 8.63 -39.58 -0.34 -0.37 16 19 C -0.12 -0.05 10.05 -39.58 -0.40 -0.45 16 20 C -0.12 -0.06 10.05 -39.58 -0.40 -0.46 16 21 C -0.12 -0.04 10.05 -39.58 -0.40 -0.44 16 22 C -0.12 -0.02 9.71 -39.58 -0.38 -0.40 16 23 C -0.14 0.14 7.25 -25.92 -0.19 -0.05 16 24 C -0.06 0.08 9.54 -39.19 -0.37 -0.30 16 25 C -0.13 0.15 8.64 -39.63 -0.34 -0.19 16 26 H 0.38 -1.34 8.74 45.56 0.40 -0.95 16 27 H 0.08 -0.24 7.96 -51.93 -0.41 -0.66 16 28 H -0.25 -0.24 7.11 56.52 0.40 0.17 16 29 H -0.26 -0.02 7.11 56.52 0.40 0.39 16 30 H 0.14 0.12 8.06 -52.49 -0.42 -0.30 16 31 H 0.40 -0.32 9.06 45.56 0.41 0.09 16 32 H 0.40 -1.26 6.73 -40.82 -0.27 -1.53 16 33 H 0.10 -0.16 7.73 -51.93 -0.40 -0.56 16 34 H 0.08 -0.16 8.14 -51.93 -0.42 -0.59 16 35 H 0.12 -0.13 6.64 -52.49 -0.35 -0.48 16 36 H 0.12 -0.13 8.06 -52.49 -0.42 -0.55 16 37 H 0.12 -0.12 8.06 -52.48 -0.42 -0.55 16 38 H 0.12 -0.15 8.06 -52.49 -0.42 -0.57 16 39 H 0.12 -0.18 8.06 -52.49 -0.42 -0.61 16 40 H 0.07 -0.02 8.14 -51.93 -0.42 -0.45 16 41 H 0.10 -0.10 6.30 -51.93 -0.33 -0.43 16 42 H 0.13 -0.59 6.40 -52.49 -0.34 -0.93 16 43 H 0.14 -0.45 4.85 -52.48 -0.25 -0.71 16 LS Contribution 357.62 15.07 5.39 5.39 Total: 0.00 -9.77 357.62 -11.65 -21.41 By element: Atomic # 1 Polarization: -5.61 SS G_CDS: -4.51 Total: -10.12 kcal Atomic # 6 Polarization: 2.04 SS G_CDS: -6.02 Total: -3.98 kcal Atomic # 7 Polarization: 0.33 SS G_CDS: -0.28 Total: 0.05 kcal Atomic # 8 Polarization: -5.04 SS G_CDS: -1.16 Total: -6.20 kcal Atomic # 14 Polarization: -1.49 SS G_CDS: -5.06 Total: -6.55 kcal Total LS contribution 5.39 Total: 5.39 kcal Total: -9.77 -11.65 -21.41 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705150_13422076.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -0.472 kcal (2) G-P(sol) polarization free energy of solvation -9.766 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -10.238 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.648 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.415 kcal (6) G-S(sol) free energy of system = (1) + (5) -21.886 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds