Wall clock time and date at job start Tue Mar 9 2021 13:47:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86296 * 109.47336 * 2 1 4 4 C 1.50707 * 109.46665 * 119.99937 * 2 1 3 5 5 C 1.31114 * 118.54118 * 249.97922 * 4 2 1 6 6 N 1.38967 * 121.86730 * 179.68736 * 5 4 2 7 7 C 1.47029 * 118.85734 * 13.17654 * 6 5 4 8 8 C 1.50705 * 109.81988 * 196.87675 * 7 6 5 9 9 O 1.21275 * 119.99947 * 19.13903 * 8 7 6 10 10 N 1.34776 * 119.99715 * 199.13751 * 8 7 6 11 11 C 1.46505 * 119.99597 * 180.02562 * 10 8 7 12 12 H 1.09000 * 112.85296 * 23.80222 * 11 10 8 13 13 C 1.53781 * 113.61334 * 154.99978 * 11 10 8 14 14 C 1.53786 * 87.17350 * 89.07333 * 13 11 10 15 15 H 1.09000 * 113.60973 * 270.92699 * 14 13 11 16 16 C 1.50690 * 113.61518 * 140.02616 * 14 13 11 17 17 C 1.38242 * 119.99897 * 299.72284 * 16 14 13 18 18 C 1.38238 * 119.99898 * 179.79260 * 17 16 14 19 19 C 1.38237 * 119.99870 * 0.43676 * 18 17 16 20 20 C 1.38229 * 120.00133 * 359.81866 * 19 18 17 21 21 C 1.38233 * 120.00317 * 359.97201 * 20 19 18 22 22 C 1.53781 * 113.61146 * 252.49455 * 11 10 8 23 23 C 1.53535 * 107.71180 * 316.44908 * 7 6 5 24 24 C 1.50200 * 118.54831 * 70.00069 * 4 2 1 25 25 H 0.96692 * 114.00660 * 300.00454 * 1 2 3 26 26 H 1.09001 * 109.47441 * 239.99281 * 2 1 3 27 27 H 1.48494 * 110.00307 * 178.67879 * 3 2 1 28 28 H 1.48501 * 109.99771 * 299.99924 * 3 2 1 29 29 H 1.07996 * 119.08254 * 359.59297 * 5 4 2 30 30 H 0.97002 * 120.58242 * 193.28868 * 6 5 4 31 31 H 1.09003 * 109.82009 * 76.02636 * 7 6 5 32 32 H 0.96995 * 120.00232 * 359.97438 * 10 8 7 33 33 H 1.09002 * 113.61445 * 203.66333 * 13 11 10 34 34 H 1.09002 * 113.61408 * 334.48063 * 13 11 10 35 35 H 1.07998 * 120.00098 * 0.02562 * 17 16 14 36 36 H 1.08001 * 119.99489 * 180.27799 * 18 17 16 37 37 H 1.08004 * 119.99323 * 179.83552 * 19 18 17 38 38 H 1.07998 * 120.00169 * 179.97438 * 20 19 18 39 39 H 1.07993 * 120.00575 * 180.02562 * 21 20 19 40 40 H 1.09005 * 113.61471 * 25.43638 * 22 11 10 41 41 H 1.09003 * 113.61469 * 156.33416 * 22 11 10 42 42 H 1.09007 * 109.62326 * 180.63746 * 23 7 6 43 43 H 1.08997 * 109.62446 * 301.00625 * 23 7 6 44 44 H 1.08998 * 109.32826 * 79.77350 * 24 4 2 45 45 H 1.08996 * 109.33101 * 320.28893 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9312 -0.7104 1.2306 5 6 2.5118 -0.0028 2.1694 6 7 2.9945 -0.5857 3.3349 7 6 3.1182 -2.0494 3.3977 8 6 3.2523 -2.4898 4.8328 9 8 2.9069 -1.7494 5.7290 10 7 3.7560 -3.7064 5.1200 11 6 3.8859 -4.1347 6.5150 12 1 3.2007 -3.6133 7.1834 13 6 3.8781 -5.6620 6.6938 14 6 5.4042 -5.6150 6.5103 15 1 5.7219 -5.7003 5.4711 16 6 6.1518 -6.5452 7.4305 17 6 6.0429 -6.3971 8.8006 18 6 6.7252 -7.2532 9.6447 19 6 7.5237 -8.2515 9.1187 20 6 7.6368 -8.3962 7.7487 21 6 6.9510 -7.5430 6.9045 22 6 5.3388 -4.1621 7.0182 23 6 1.8462 -2.6524 2.7848 24 6 1.7450 -2.1977 1.3270 25 1 -0.3934 0.4417 0.7649 26 1 1.7924 -0.5139 -0.8899 27 1 3.5346 1.7702 0.0322 28 1 1.5615 2.4678 -1.2085 29 1 2.6194 1.0630 2.0326 30 1 3.2439 -0.0366 4.0946 31 1 3.9909 -2.3713 2.8295 32 1 4.0319 -4.2987 4.4031 33 1 3.5675 -5.9837 7.6878 34 1 3.3585 -6.1924 5.8957 35 1 5.4217 -5.6151 9.2116 36 1 6.6365 -7.1403 10.7151 37 1 8.0589 -8.9186 9.7783 38 1 8.2609 -9.1759 7.3377 39 1 7.0390 -7.6563 5.8342 40 1 5.9997 -3.4815 6.4814 41 1 5.4276 -4.0736 8.1010 42 1 1.9003 -3.7404 2.8259 43 1 0.9736 -2.3082 3.3399 44 1 2.5155 -2.6967 0.7392 45 1 0.7645 -2.4649 0.9329 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705150_15413834.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:47:36 Heat of formation + Delta-G solvation = 7.335610 kcal Electronic energy + Delta-G solvation = -25488.149915 eV Core-core repulsion = 21858.859770 eV Total energy + Delta-G solvation = -3629.290146 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 315.162 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -41.76270 -40.77769 -39.57973 -38.63712 -37.29704 -34.74305 -33.17777 -32.93552 -31.85065 -31.48685 -27.73087 -26.70424 -26.01552 -25.31751 -23.80596 -23.45237 -22.46624 -21.88882 -20.16254 -19.40011 -18.98736 -18.22667 -17.80083 -17.22929 -16.75237 -16.42184 -16.21084 -15.98861 -15.82108 -15.68341 -15.29086 -15.22038 -14.94435 -14.67135 -14.36638 -14.28713 -14.06670 -14.04797 -13.89233 -13.45386 -13.10985 -13.09077 -12.93567 -12.74069 -12.20648 -12.16079 -11.89896 -11.85548 -11.73633 -11.68082 -11.27587 -11.17274 -10.90194 -10.18117 -10.14225 -9.81235 -9.54579 -8.44276 -4.98184 0.43545 0.50518 1.34906 1.41322 1.46079 1.63629 1.86293 2.00715 2.64457 2.83874 3.46554 3.50638 3.68179 3.72719 3.74670 3.79469 3.89399 3.94500 4.05692 4.07372 4.15682 4.25346 4.31278 4.34168 4.46109 4.56600 4.59399 4.63221 4.63946 4.68476 4.76862 4.79745 4.84404 4.96680 5.00630 5.05260 5.13425 5.14859 5.18798 5.21894 5.31562 5.51225 5.59301 5.59910 5.65062 5.75158 6.13244 6.25190 6.45041 6.83451 6.92821 7.09840 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.564 6.564 2 C -0.047 4.047 3 Si 0.754 3.246 4 C -0.291 4.291 5 C 0.145 3.855 6 N -0.737 5.737 7 C 0.138 3.862 8 C 0.517 3.483 9 O -0.570 6.570 10 N -0.694 5.694 11 C 0.118 3.882 12 H 0.086 0.914 13 C -0.125 4.125 14 C -0.066 4.066 15 H 0.111 0.889 16 C -0.079 4.079 17 C -0.128 4.128 18 C -0.131 4.131 19 C -0.139 4.139 20 C -0.131 4.131 21 C -0.128 4.128 22 C -0.142 4.142 23 C -0.118 4.118 24 C -0.054 4.054 25 H 0.391 0.609 26 H 0.094 0.906 27 H -0.289 1.289 28 H -0.308 1.308 29 H 0.148 0.852 30 H 0.409 0.591 31 H 0.108 0.892 32 H 0.418 0.582 33 H 0.097 0.903 34 H 0.089 0.911 35 H 0.131 0.869 36 H 0.132 0.868 37 H 0.131 0.869 38 H 0.133 0.867 39 H 0.135 0.865 40 H 0.068 0.932 41 H 0.094 0.906 42 H 0.098 0.902 43 H 0.060 0.940 44 H 0.070 0.930 45 H 0.070 0.930 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.739 -3.068 1.211 3.729 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.372 6.372 2 C -0.159 4.159 3 Si 0.662 3.338 4 C -0.302 4.302 5 C 0.024 3.976 6 N -0.370 5.370 7 C 0.029 3.971 8 C 0.303 3.697 9 O -0.449 6.449 10 N -0.346 5.346 11 C 0.012 3.988 12 H 0.104 0.896 13 C -0.163 4.163 14 C -0.084 4.084 15 H 0.129 0.871 16 C -0.079 4.079 17 C -0.146 4.146 18 C -0.149 4.149 19 C -0.157 4.157 20 C -0.149 4.149 21 C -0.146 4.146 22 C -0.181 4.181 23 C -0.157 4.157 24 C -0.091 4.091 25 H 0.240 0.760 26 H 0.111 0.889 27 H -0.216 1.216 28 H -0.236 1.236 29 H 0.164 0.836 30 H 0.245 0.755 31 H 0.126 0.874 32 H 0.255 0.745 33 H 0.115 0.885 34 H 0.107 0.893 35 H 0.149 0.851 36 H 0.150 0.850 37 H 0.149 0.851 38 H 0.151 0.849 39 H 0.153 0.847 40 H 0.086 0.914 41 H 0.112 0.888 42 H 0.116 0.884 43 H 0.079 0.921 44 H 0.088 0.912 45 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges 2.078 -2.405 0.882 3.299 hybrid contribution 0.465 -0.567 -0.155 0.749 sum 2.542 -2.972 0.727 3.978 Atomic orbital electron populations 1.86427 1.18326 1.82122 1.50313 1.24748 0.84560 1.08841 0.97730 0.94257 0.77765 0.76662 0.85123 1.20963 1.12029 0.97327 0.99853 1.20493 0.93789 0.96731 0.86538 1.44389 1.72482 1.04512 1.15638 1.21085 1.00922 0.83255 0.91813 1.20850 0.75927 0.81758 0.91174 1.90723 1.50314 1.54369 1.49451 1.45508 1.63685 1.16874 1.08541 1.21821 0.97614 0.96349 0.83010 0.89553 1.23356 0.95007 0.93804 1.04106 1.21637 0.94790 0.93057 0.98924 0.87086 1.19886 0.97503 0.96504 0.94041 1.21232 1.00250 0.99809 0.93275 1.21427 0.97232 0.95606 1.00657 1.21442 0.99461 0.98888 0.95880 1.21441 0.99809 0.99786 0.93870 1.21333 0.97134 0.95452 1.00648 1.23587 0.96366 0.96061 1.02043 1.21805 0.95740 1.01576 0.96591 1.19942 1.02199 0.91917 0.95049 0.75982 0.88863 1.21640 1.23643 0.83569 0.75478 0.87412 0.74476 0.88467 0.89268 0.85096 0.85022 0.85123 0.84903 0.84706 0.91361 0.88781 0.88369 0.92105 0.91162 0.91147 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.21 12.88 -148.98 -1.92 -3.13 16 2 C -0.05 -0.03 2.81 71.24 0.20 0.17 16 3 Si 0.75 -0.48 29.72 68.60 2.04 1.56 16 4 C -0.29 0.14 5.37 -16.76 -0.09 0.05 16 5 C 0.14 -0.25 9.62 83.41 0.80 0.56 16 6 N -0.74 0.65 5.47 -328.97 -1.80 -1.15 16 7 C 0.14 -0.42 3.36 44.33 0.15 -0.27 16 8 C 0.52 0.08 7.09 87.66 0.62 0.70 16 9 O -0.57 -5.00 15.68 -3.01 -0.05 -5.04 16 10 N -0.69 3.56 5.26 -440.03 -2.32 1.25 16 11 C 0.12 -0.38 4.32 45.52 0.20 -0.19 16 12 H 0.09 0.12 7.46 -2.39 -0.02 0.10 16 13 C -0.12 0.75 7.29 31.12 0.23 0.98 16 14 C -0.07 0.34 3.87 -10.92 -0.04 0.30 16 15 H 0.11 -0.88 8.10 -2.39 -0.02 -0.90 16 16 C -0.08 0.08 5.29 -19.87 -0.11 -0.02 16 17 C -0.13 0.02 8.63 22.27 0.19 0.21 16 18 C -0.13 -0.09 10.05 22.27 0.22 0.14 16 19 C -0.14 -0.11 10.05 22.27 0.22 0.11 16 20 C -0.13 -0.04 10.05 22.27 0.22 0.18 16 21 C -0.13 0.08 9.71 22.27 0.22 0.29 16 22 C -0.14 0.48 7.26 31.21 0.23 0.70 16 23 C -0.12 0.40 5.47 30.79 0.17 0.57 16 24 C -0.05 0.08 5.85 29.70 0.17 0.26 16 25 H 0.39 -2.12 8.70 -74.06 -0.64 -2.76 16 26 H 0.09 0.22 7.96 -2.39 -0.02 0.20 16 27 H -0.29 -1.18 7.11 99.48 0.71 -0.47 16 28 H -0.31 -2.39 7.11 99.48 0.71 -1.68 16 29 H 0.15 -0.80 4.48 -2.91 -0.01 -0.82 16 30 H 0.41 -0.09 8.10 -92.71 -0.75 -0.84 16 31 H 0.11 -0.71 8.14 -2.39 -0.02 -0.73 16 32 H 0.42 -4.58 8.70 -92.71 -0.81 -5.39 16 33 H 0.10 -0.50 7.73 -2.39 -0.02 -0.52 16 34 H 0.09 -0.71 8.14 -2.39 -0.02 -0.72 16 35 H 0.13 -0.37 6.65 -2.91 -0.02 -0.39 16 36 H 0.13 -0.31 8.06 -2.91 -0.02 -0.33 16 37 H 0.13 -0.28 8.06 -2.91 -0.02 -0.30 16 38 H 0.13 -0.39 8.06 -2.91 -0.02 -0.41 16 39 H 0.14 -0.59 8.06 -2.91 -0.02 -0.61 16 40 H 0.07 -0.12 8.14 -2.38 -0.02 -0.14 16 41 H 0.09 -0.27 6.31 -2.39 -0.02 -0.29 16 42 H 0.10 -0.74 8.14 -2.38 -0.02 -0.76 16 43 H 0.06 0.04 8.14 -2.39 -0.02 0.02 16 44 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 45 H 0.07 0.04 8.14 -2.39 -0.02 0.02 16 Total: 0.00 -18.15 362.72 -1.57 -19.73 By element: Atomic # 1 Polarization: -16.81 SS G_CDS: -1.14 Total: -17.95 kcal Atomic # 6 Polarization: 1.13 SS G_CDS: 3.61 Total: 4.74 kcal Atomic # 7 Polarization: 4.21 SS G_CDS: -4.12 Total: 0.10 kcal Atomic # 8 Polarization: -6.21 SS G_CDS: -1.97 Total: -8.17 kcal Atomic # 14 Polarization: -0.48 SS G_CDS: 2.04 Total: 1.56 kcal Total: -18.15 -1.57 -19.73 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705150_15413834.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 27.062 kcal (2) G-P(sol) polarization free energy of solvation -18.151 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.910 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.575 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.726 kcal (6) G-S(sol) free energy of system = (1) + (5) 7.336 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds