Wall clock time and date at job start Tue Mar 9 2021 13:47:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86304 * 109.46990 * 2 1 4 4 C 1.50697 * 109.47421 * 239.99970 * 2 1 3 5 5 C 1.31121 * 118.54926 * 110.39823 * 4 2 1 6 6 N 1.38924 * 121.84473 * 179.64217 * 5 4 2 7 7 C 1.47026 * 118.88959 * 13.29490 * 6 5 4 8 8 C 1.53542 * 107.65576 * 316.33335 * 7 6 5 9 9 C 1.50211 * 118.54797 * 290.40176 * 4 2 1 10 10 C 1.50697 * 109.33637 * 320.28076 * 9 4 2 11 11 O 1.21281 * 120.00150 * 275.23287 * 10 9 4 12 12 N 1.34785 * 120.00193 * 95.22942 * 10 9 4 13 13 C 1.46498 * 120.00088 * 185.00133 * 12 10 9 14 14 H 1.08994 * 112.84709 * 336.19123 * 13 12 10 15 15 C 1.53782 * 113.61360 * 107.50378 * 13 12 10 16 16 C 1.53781 * 87.08005 * 89.11716 * 15 13 12 17 17 H 1.09004 * 113.68880 * 270.86863 * 16 15 13 18 18 C 1.50696 * 113.61487 * 139.98053 * 16 15 13 19 19 C 1.38229 * 120.00259 * 322.22625 * 18 16 15 20 20 C 1.38232 * 120.00331 * 179.76463 * 19 18 16 21 21 C 1.38235 * 119.99756 * 0.50714 * 20 19 18 22 22 C 1.38235 * 120.00188 * 359.74630 * 21 20 19 23 23 C 1.38235 * 119.99967 * 142.49803 * 18 16 15 24 24 C 1.53779 * 87.08544 * 25.42975 * 16 15 13 25 25 H 0.96706 * 113.99639 * 60.00213 * 1 2 3 26 26 H 1.09000 * 109.47120 * 119.99866 * 2 1 3 27 27 H 1.48501 * 109.99702 * 298.67802 * 3 2 1 28 28 H 1.48495 * 110.00179 * 59.99733 * 3 2 1 29 29 H 1.07996 * 119.07653 * 359.61817 * 5 4 2 30 30 H 0.97007 * 120.55172 * 193.27200 * 6 5 4 31 31 H 1.09004 * 109.82359 * 196.80036 * 7 6 5 32 32 H 1.08988 * 109.82291 * 75.87446 * 7 6 5 33 33 H 1.09004 * 109.62245 * 180.67426 * 8 7 6 34 34 H 1.08999 * 109.62567 * 301.22711 * 8 7 6 35 35 H 1.09002 * 109.31127 * 79.75614 * 9 4 2 36 36 H 0.97002 * 119.99651 * 4.99555 * 12 10 9 37 37 H 1.09001 * 113.60773 * 203.66115 * 15 13 12 38 38 H 1.08997 * 113.61572 * 334.56344 * 15 13 12 39 39 H 1.08003 * 119.99700 * 0.02562 * 19 18 16 40 40 H 1.08006 * 120.00178 * 180.22662 * 20 19 18 41 41 H 1.08006 * 120.00181 * 179.72297 * 21 20 19 42 42 H 1.08001 * 120.00177 * 179.97438 * 22 21 20 43 43 H 1.08007 * 120.00256 * 0.02562 * 23 18 16 44 44 H 1.08996 * 113.61523 * 220.02071 * 24 16 15 45 45 H 1.08996 * 113.68907 * 89.12984 * 24 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 2.5187 -0.0040 -2.1659 6 7 3.0139 -0.5893 -3.3244 7 6 2.6224 -1.9695 -3.6461 8 6 2.7089 -2.7917 -2.3523 9 6 1.7370 -2.1965 -1.3310 10 6 1.9833 -2.8242 0.0167 11 8 3.1127 -3.1065 0.3569 12 7 0.9485 -3.0719 0.8441 13 6 1.1966 -3.5799 2.1956 14 1 2.1525 -4.0959 2.2849 15 6 0.9510 -2.5382 3.2999 16 6 -0.5072 -3.0261 3.3267 17 1 -1.1587 -2.4973 2.6309 18 6 -1.0868 -3.1204 4.7145 19 6 -0.2997 -3.5553 5.7642 20 6 -0.8299 -3.6372 7.0382 21 6 -2.1504 -3.2941 7.2605 22 6 -2.9392 -2.8640 6.2098 23 6 -2.4073 -2.7772 4.9368 24 6 0.0141 -4.3673 2.7844 25 1 -0.3933 0.4417 -0.7651 26 1 1.7923 -0.5138 0.8900 27 1 1.5878 2.4585 -1.2243 28 1 1.5614 2.4680 1.2084 29 1 2.6201 1.0629 -2.0323 30 1 3.6077 -0.0956 -3.9114 31 1 3.3016 -2.3821 -4.3923 32 1 1.6010 -1.9849 -4.0263 33 1 2.4357 -3.8268 -2.5574 34 1 3.7245 -2.7495 -1.9589 35 1 0.7136 -2.4059 -1.6421 36 1 0.0395 -2.9138 0.5446 37 1 1.4965 -2.7419 4.2213 38 1 1.0607 -1.5082 2.9608 39 1 0.7309 -3.8272 5.5898 40 1 -0.2138 -3.9736 7.8590 41 1 -2.5661 -3.3623 8.2550 42 1 -3.9710 -2.5963 6.3834 43 1 -3.0238 -2.4419 4.1158 44 1 -0.6325 -4.8138 2.0290 45 1 0.3037 -5.0720 3.5638 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705150_15608500.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:47:42 Heat of formation + Delta-G solvation = 10.237026 kcal Electronic energy + Delta-G solvation = -26689.611083 eV Core-core repulsion = 23060.446752 eV Total energy + Delta-G solvation = -3629.164331 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 315.162 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -41.76407 -40.80207 -39.44780 -38.49703 -37.56155 -34.53653 -33.33636 -32.74899 -31.86652 -31.49163 -27.41241 -26.74286 -26.36727 -25.48488 -23.57155 -23.19197 -22.49481 -21.85754 -20.09564 -19.24497 -18.99919 -18.35786 -17.72561 -17.23453 -16.96231 -16.68403 -16.17345 -16.14231 -15.84035 -15.54871 -15.23944 -15.10628 -14.84214 -14.52625 -14.43442 -14.22403 -14.11861 -14.04777 -13.88038 -13.46320 -13.17799 -13.08031 -12.74145 -12.62635 -12.32300 -12.16928 -11.91432 -11.72922 -11.69676 -11.67658 -11.35637 -11.16243 -10.71519 -10.35265 -10.00904 -9.82582 -9.55578 -8.44000 -4.92409 0.42459 0.48921 1.27249 1.34047 1.49929 1.70244 1.93549 2.24877 2.67771 2.82838 3.47694 3.49798 3.68693 3.71382 3.76033 3.83488 3.92680 3.97150 4.05834 4.14366 4.19919 4.24332 4.29606 4.35992 4.40997 4.57667 4.59761 4.62379 4.66207 4.69262 4.75117 4.77230 4.83560 4.89703 4.98086 5.01485 5.12339 5.17163 5.18230 5.23067 5.29400 5.45634 5.56977 5.61625 5.63414 5.75515 6.11719 6.32740 6.58311 6.66648 6.97214 7.29671 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.053 4.053 3 Si 0.736 3.264 4 C -0.288 4.288 5 C 0.158 3.842 6 N -0.745 5.745 7 C 0.124 3.876 8 C -0.127 4.127 9 C -0.030 4.030 10 C 0.529 3.471 11 O -0.581 6.581 12 N -0.699 5.699 13 C 0.117 3.883 14 H 0.086 0.914 15 C -0.141 4.141 16 C -0.064 4.064 17 H 0.101 0.899 18 C -0.078 4.078 19 C -0.128 4.128 20 C -0.129 4.129 21 C -0.138 4.138 22 C -0.130 4.130 23 C -0.130 4.130 24 C -0.124 4.124 25 H 0.384 0.616 26 H 0.088 0.912 27 H -0.266 1.266 28 H -0.311 1.311 29 H 0.146 0.854 30 H 0.414 0.586 31 H 0.100 0.900 32 H 0.069 0.931 33 H 0.082 0.918 34 H 0.062 0.938 35 H 0.098 0.902 36 H 0.412 0.588 37 H 0.096 0.904 38 H 0.061 0.939 39 H 0.132 0.868 40 H 0.135 0.865 41 H 0.134 0.866 42 H 0.134 0.866 43 H 0.130 0.870 44 H 0.083 0.917 45 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.078 0.508 -4.549 4.702 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.164 4.164 3 Si 0.642 3.358 4 C -0.300 4.300 5 C 0.035 3.965 6 N -0.375 5.375 7 C -0.001 4.001 8 C -0.165 4.165 9 C -0.051 4.051 10 C 0.316 3.684 11 O -0.460 6.460 12 N -0.350 5.350 13 C 0.011 3.989 14 H 0.104 0.896 15 C -0.180 4.180 16 C -0.083 4.083 17 H 0.120 0.880 18 C -0.078 4.078 19 C -0.145 4.145 20 C -0.147 4.147 21 C -0.156 4.156 22 C -0.148 4.148 23 C -0.148 4.148 24 C -0.162 4.162 25 H 0.233 0.767 26 H 0.106 0.894 27 H -0.192 1.192 28 H -0.240 1.240 29 H 0.162 0.838 30 H 0.250 0.750 31 H 0.118 0.882 32 H 0.087 0.913 33 H 0.100 0.900 34 H 0.081 0.919 35 H 0.116 0.884 36 H 0.248 0.752 37 H 0.114 0.886 38 H 0.080 0.920 39 H 0.149 0.851 40 H 0.153 0.847 41 H 0.152 0.848 42 H 0.152 0.848 43 H 0.148 0.852 44 H 0.102 0.898 45 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges -0.447 0.690 -3.809 3.897 hybrid contribution -1.345 0.176 -0.322 1.394 sum -1.792 0.866 -4.132 4.586 Atomic orbital electron populations 1.86520 1.18463 1.80138 1.50100 1.24709 0.83594 1.09988 0.98073 0.94302 0.91405 0.73450 0.76647 1.20320 1.16886 0.93554 0.99201 1.20646 0.92396 0.96983 0.86520 1.44663 1.53655 1.14993 1.24213 1.21659 1.01405 0.81213 0.95813 1.21804 0.99542 0.99728 0.95467 1.19605 1.01472 0.92765 0.91287 1.20928 0.84196 0.76322 0.86904 1.90669 1.24256 1.53626 1.77448 1.45685 1.09956 1.66058 1.13270 1.21788 0.99568 0.95763 0.81744 0.89561 1.23527 0.95918 0.99270 0.99284 1.21517 0.95772 0.97864 0.93119 0.88050 1.19874 0.93993 0.98643 0.95295 1.21224 1.00417 1.00233 0.92674 1.21436 0.95925 0.99841 0.97506 1.21451 0.94552 0.99683 0.99885 1.21435 1.00711 0.99592 0.93065 1.21311 0.95294 1.00574 0.97641 1.23338 0.96238 0.95990 1.00597 0.76742 0.89421 1.19215 1.23969 0.83765 0.74998 0.88180 0.91261 0.89977 0.91945 0.88427 0.75170 0.88604 0.91978 0.85051 0.84734 0.84839 0.84820 0.85206 0.89794 0.88240 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.25 12.88 -148.98 -1.92 -2.17 16 2 C -0.05 -0.06 2.40 71.23 0.17 0.11 16 3 Si 0.74 -0.11 29.95 68.60 2.05 1.95 16 4 C -0.29 0.00 5.03 -16.76 -0.08 -0.09 16 5 C 0.16 -0.41 9.62 83.41 0.80 0.39 16 6 N -0.74 3.66 5.83 -345.91 -2.02 1.65 16 7 C 0.12 -0.66 7.16 86.46 0.62 -0.04 16 8 C -0.13 0.04 5.31 30.79 0.16 0.20 16 9 C -0.03 -0.02 2.70 -12.43 -0.03 -0.06 16 10 C 0.53 3.09 5.29 87.65 0.46 3.56 16 11 O -0.58 -8.20 15.67 -3.03 -0.05 -8.25 16 12 N -0.70 -1.21 5.22 -440.03 -2.29 -3.51 16 13 C 0.12 0.26 4.36 45.52 0.20 0.46 16 14 H 0.09 0.54 7.42 -2.39 -0.02 0.52 16 15 C -0.14 -0.30 7.25 31.12 0.23 -0.07 16 16 C -0.06 -0.02 3.86 -11.02 -0.04 -0.07 16 17 H 0.10 -0.02 8.09 -2.38 -0.02 -0.04 16 18 C -0.08 -0.23 5.29 -19.87 -0.11 -0.34 16 19 C -0.13 -0.36 8.60 22.27 0.19 -0.17 16 20 C -0.13 -0.36 10.05 22.27 0.22 -0.14 16 21 C -0.14 -0.39 10.05 22.27 0.22 -0.17 16 22 C -0.13 -0.39 10.05 22.27 0.22 -0.16 16 23 C -0.13 -0.42 9.71 22.27 0.22 -0.20 16 24 C -0.12 0.13 7.29 31.12 0.23 0.35 16 25 H 0.38 -2.04 8.70 -74.05 -0.64 -2.69 16 26 H 0.09 0.44 6.84 -2.39 -0.02 0.42 16 27 H -0.27 -0.16 6.84 99.48 0.68 0.52 16 28 H -0.31 -2.70 7.11 99.48 0.71 -1.99 16 29 H 0.15 -0.78 4.31 -2.91 -0.01 -0.79 16 30 H 0.41 -3.66 8.96 -92.70 -0.83 -4.49 16 31 H 0.10 -0.84 8.14 -2.39 -0.02 -0.86 16 32 H 0.07 -0.44 8.14 -2.39 -0.02 -0.46 16 33 H 0.08 -0.14 8.14 -2.38 -0.02 -0.16 16 34 H 0.06 0.33 7.51 -2.39 -0.02 0.31 16 35 H 0.10 -0.23 8.07 -2.39 -0.02 -0.25 16 36 H 0.41 -0.75 8.65 -92.71 -0.80 -1.55 16 37 H 0.10 0.13 6.32 -2.39 -0.02 0.12 16 38 H 0.06 0.30 8.14 -2.39 -0.02 0.28 16 39 H 0.13 0.01 6.67 -2.91 -0.02 -0.01 16 40 H 0.13 -0.10 8.06 -2.91 -0.02 -0.12 16 41 H 0.13 -0.09 8.06 -2.91 -0.02 -0.11 16 42 H 0.13 -0.07 8.06 -2.91 -0.02 -0.10 16 43 H 0.13 0.04 8.06 -2.91 -0.02 0.01 16 44 H 0.08 -0.21 8.14 -2.39 -0.02 -0.23 16 45 H 0.10 -0.13 7.72 -2.39 -0.02 -0.15 16 Total: 0.00 -16.78 359.70 -1.78 -18.56 By element: Atomic # 1 Polarization: -10.56 SS G_CDS: -1.24 Total: -11.80 kcal Atomic # 6 Polarization: -0.10 SS G_CDS: 3.68 Total: 3.58 kcal Atomic # 7 Polarization: 2.45 SS G_CDS: -4.31 Total: -1.86 kcal Atomic # 8 Polarization: -8.46 SS G_CDS: -1.97 Total: -10.42 kcal Atomic # 14 Polarization: -0.11 SS G_CDS: 2.05 Total: 1.95 kcal Total: -16.78 -1.78 -18.56 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705150_15608500.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 28.796 kcal (2) G-P(sol) polarization free energy of solvation -16.783 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 12.013 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.776 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.559 kcal (6) G-S(sol) free energy of system = (1) + (5) 10.237 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds