Wall clock time and date at job start Tue Mar 9 2021 13:47:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86300 * 109.47241 * 2 1 4 4 C 1.50700 * 109.47341 * 240.00126 * 2 1 3 5 5 C 1.38264 * 119.94555 * 119.72100 * 4 2 1 6 6 C 1.38138 * 120.05431 * 179.72623 * 5 4 2 7 7 C 1.38740 * 119.94513 * 0.57743 * 6 5 4 8 8 O 1.35899 * 120.05536 * 179.68548 * 7 6 5 9 9 C 1.42900 * 117.00511 * 0.02562 * 8 7 6 10 10 C 1.50692 * 109.47397 * 180.02562 * 9 8 7 11 11 O 1.21276 * 120.00047 * 359.97438 * 10 9 8 12 12 N 1.34778 * 119.99924 * 180.02562 * 10 9 8 13 13 C 1.46502 * 119.99802 * 179.97438 * 12 10 9 14 14 H 1.09000 * 112.85062 * 334.66222 * 13 12 10 15 15 C 1.53783 * 113.61363 * 105.86192 * 13 12 10 16 16 C 1.54052 * 86.98379 * 89.15963 * 15 13 12 17 17 H 1.08995 * 113.61153 * 270.88112 * 16 15 13 18 18 C 1.50703 * 113.61551 * 139.97865 * 16 15 13 19 19 C 1.38238 * 120.00110 * 322.22887 * 18 16 15 20 20 C 1.38242 * 119.99888 * 179.77069 * 19 18 16 21 21 C 1.38235 * 119.99964 * 0.48153 * 20 19 18 22 22 C 1.38235 * 119.99806 * 359.79338 * 21 20 19 23 23 C 1.38231 * 120.00355 * 359.95588 * 22 21 20 24 24 C 1.53777 * 87.08170 * 25.43230 * 16 15 13 25 25 C 1.38726 * 119.88742 * 359.69711 * 7 6 5 26 26 C 1.38153 * 119.94564 * 0.02562 * 25 7 6 27 27 H 0.96693 * 114.00306 * 59.99646 * 1 2 3 28 28 H 1.09000 * 109.47349 * 120.00016 * 2 1 3 29 29 H 1.48506 * 110.00048 * 298.68597 * 3 2 1 30 30 H 1.48502 * 109.99996 * 59.99922 * 3 2 1 31 31 H 1.08002 * 119.97450 * 359.97438 * 5 4 2 32 32 H 1.08003 * 120.02825 * 180.25290 * 6 5 4 33 33 H 1.09007 * 109.47130 * 300.00980 * 9 8 7 34 34 H 1.09003 * 109.46727 * 59.99954 * 9 8 7 35 35 H 0.96997 * 120.00051 * 359.97438 * 12 10 9 36 36 H 1.09001 * 113.60799 * 203.66354 * 15 13 12 37 37 H 1.08993 * 113.61417 * 334.56088 * 15 13 12 38 38 H 1.07995 * 119.99750 * 359.97438 * 19 18 16 39 39 H 1.07997 * 119.99842 * 180.25456 * 20 19 18 40 40 H 1.07997 * 119.99892 * 179.77111 * 21 20 19 41 41 H 1.08002 * 119.99816 * 179.97438 * 22 21 20 42 42 H 1.08005 * 120.00204 * 179.97438 * 23 22 21 43 43 H 1.09002 * 113.61632 * 220.02803 * 24 16 15 44 44 H 1.09002 * 113.61904 * 89.11395 * 24 16 15 45 45 H 1.07999 * 120.03394 * 179.97438 * 25 7 6 46 46 H 1.07995 * 119.97802 * 179.97438 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7214 -0.0356 -2.1427 6 6 3.1878 -0.6862 -3.2685 7 6 2.8530 -2.0143 -3.4895 8 8 3.3053 -2.6547 -4.5996 9 6 4.1220 -1.8996 -5.4967 10 6 4.5256 -2.7679 -6.6603 11 8 4.1511 -3.9201 -6.7157 12 7 5.3035 -2.2644 -7.6390 13 6 5.6963 -3.1087 -8.7700 14 1 5.6961 -4.1709 -8.5253 15 6 4.9521 -2.7768 -10.0742 16 6 6.0803 -1.7691 -10.3658 17 1 5.8930 -0.7747 -9.9607 18 6 6.5077 -1.7429 -11.8107 19 6 6.5641 -2.9182 -12.5363 20 6 6.9516 -2.8935 -13.8630 21 6 7.2924 -1.6949 -14.4614 22 6 7.2415 -0.5204 -13.7342 23 6 6.8490 -0.5443 -12.4090 24 6 6.9809 -2.6386 -9.4727 25 6 2.0554 -2.6875 -2.5756 26 6 1.5962 -2.0340 -1.4483 27 1 -0.3933 0.4417 -0.7649 28 1 1.7923 -0.5138 0.8900 29 1 1.5878 2.4586 -1.2242 30 1 1.5615 2.4679 1.2085 31 1 2.9775 0.9998 -1.9730 32 1 3.8083 -0.1599 -3.9788 33 1 3.5608 -1.0398 -5.8627 34 1 5.0140 -1.5551 -4.9734 35 1 5.6033 -1.3429 -7.5945 36 1 4.9154 -3.6072 -10.7793 37 1 3.9793 -2.3115 -9.9155 38 1 6.3021 -3.8552 -12.0675 39 1 6.9917 -3.8112 -14.4310 40 1 7.5987 -1.6761 -15.4968 41 1 7.5081 0.4161 -14.2015 42 1 6.8096 0.3733 -11.8407 43 1 7.6448 -2.0618 -8.8287 44 1 7.4977 -3.4313 -10.0137 45 1 1.7930 -3.7212 -2.7455 46 1 0.9749 -2.5574 -0.7367 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705150_2989410.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:47:56 Heat of formation + Delta-G solvation = -15.287534 kcal Electronic energy + Delta-G solvation = -27356.372276 eV Core-core repulsion = 23371.930175 eV Total energy + Delta-G solvation = -3984.442102 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.151 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -41.75878 -41.23316 -40.27214 -39.17808 -38.54477 -37.22706 -34.70968 -32.44082 -31.91618 -31.75427 -31.59468 -29.52352 -26.71281 -26.37147 -25.88815 -24.09351 -23.52684 -22.64364 -22.30150 -21.80337 -20.14810 -19.50341 -18.51115 -18.31854 -17.84218 -17.42891 -17.13033 -16.82032 -16.42455 -16.18826 -16.13007 -15.94865 -15.61390 -15.55219 -15.11357 -14.98211 -14.62811 -14.49763 -14.36618 -14.23751 -14.04614 -13.74373 -13.57078 -13.47823 -13.40191 -13.08013 -12.74511 -12.29172 -12.15882 -12.13661 -12.05459 -11.74241 -11.69047 -11.62167 -11.17610 -11.03579 -10.58648 -10.18498 -10.03239 -9.80360 -9.53937 -9.23132 -4.90100 0.27697 0.31418 0.44296 0.51403 1.34582 1.41183 1.45406 1.62153 1.99499 2.57494 2.65460 2.84586 3.44272 3.46122 3.50207 3.68516 3.72943 3.75032 3.83157 3.94113 3.95279 4.03975 4.06424 4.11119 4.16477 4.25981 4.31489 4.32358 4.43011 4.56441 4.58065 4.64013 4.67928 4.70692 4.77005 4.83767 4.96945 4.97889 5.00681 5.13640 5.14879 5.16408 5.19663 5.25994 5.49875 5.50079 5.60278 5.65877 5.70260 5.75941 6.14099 6.26215 6.45695 6.51142 7.11306 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.552 6.552 2 C -0.083 4.083 3 Si 0.773 3.227 4 C -0.159 4.159 5 C -0.075 4.075 6 C -0.199 4.199 7 C 0.121 3.879 8 O -0.321 6.321 9 C 0.037 3.963 10 C 0.515 3.485 11 O -0.573 6.573 12 N -0.691 5.691 13 C 0.116 3.884 14 H 0.082 0.918 15 C -0.145 4.145 16 C -0.064 4.064 17 H 0.116 0.884 18 C -0.079 4.079 19 C -0.129 4.129 20 C -0.132 4.132 21 C -0.139 4.139 22 C -0.131 4.131 23 C -0.126 4.126 24 C -0.122 4.122 25 C -0.167 4.167 26 C -0.061 4.061 27 H 0.385 0.615 28 H 0.121 0.879 29 H -0.278 1.278 30 H -0.308 1.308 31 H 0.154 0.846 32 H 0.166 0.834 33 H 0.126 0.874 34 H 0.131 0.869 35 H 0.422 0.578 36 H 0.092 0.908 37 H 0.067 0.933 38 H 0.129 0.871 39 H 0.130 0.870 40 H 0.130 0.870 41 H 0.134 0.866 42 H 0.138 0.862 43 H 0.093 0.907 44 H 0.097 0.903 45 H 0.125 0.875 46 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.874 6.656 -2.046 9.110 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.360 6.360 2 C -0.191 4.191 3 Si 0.678 3.322 4 C -0.159 4.159 5 C -0.093 4.093 6 C -0.218 4.218 7 C 0.076 3.924 8 O -0.234 6.234 9 C -0.041 4.041 10 C 0.301 3.699 11 O -0.451 6.451 12 N -0.345 5.345 13 C 0.011 3.989 14 H 0.100 0.900 15 C -0.183 4.183 16 C -0.082 4.082 17 H 0.134 0.866 18 C -0.079 4.079 19 C -0.147 4.147 20 C -0.150 4.150 21 C -0.157 4.157 22 C -0.149 4.149 23 C -0.144 4.144 24 C -0.160 4.160 25 C -0.186 4.186 26 C -0.079 4.079 27 H 0.235 0.765 28 H 0.139 0.861 29 H -0.204 1.204 30 H -0.237 1.237 31 H 0.171 0.829 32 H 0.183 0.817 33 H 0.144 0.856 34 H 0.148 0.852 35 H 0.260 0.740 36 H 0.110 0.890 37 H 0.086 0.914 38 H 0.147 0.853 39 H 0.148 0.852 40 H 0.148 0.852 41 H 0.152 0.848 42 H 0.156 0.844 43 H 0.112 0.888 44 H 0.115 0.885 45 H 0.143 0.857 46 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges 5.463 6.141 -1.606 8.375 hybrid contribution -1.190 -0.123 -0.729 1.401 sum 4.273 6.018 -2.335 7.742 Atomic orbital electron populations 1.86566 1.18848 1.80401 1.50175 1.25251 0.83234 1.12077 0.98556 0.94145 0.90123 0.71596 0.76360 1.20295 1.02104 0.95149 0.98380 1.21071 0.95345 1.00186 0.92665 1.21506 1.05796 0.93150 1.01307 1.19214 0.94654 0.92038 0.86514 1.86128 1.65152 1.40393 1.31707 1.22752 0.97872 0.94113 0.89345 1.20588 0.78060 0.87534 0.83702 1.90768 1.55319 1.20365 1.78635 1.45331 1.51335 1.16504 1.21341 1.21835 0.96501 0.95390 0.85183 0.90015 1.23604 0.98122 0.99730 0.96884 1.21653 0.96041 0.99767 0.90740 0.86616 1.19889 0.98991 0.93203 0.95854 1.21228 1.00365 0.98561 0.94516 1.21417 0.99370 0.98698 0.95529 1.21440 1.00434 0.93021 1.00790 1.21451 0.99673 0.98861 0.94902 1.21342 0.99536 0.98223 0.95283 1.23347 0.95328 0.99957 0.97376 1.20619 1.01557 1.01282 0.95115 1.20904 0.97141 0.94077 0.95744 0.76538 0.86118 1.20446 1.23667 0.82896 0.81652 0.85602 0.85193 0.73959 0.88982 0.91373 0.85286 0.85166 0.85165 0.84822 0.84447 0.88810 0.88504 0.85672 0.84947 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -1.49 12.77 -148.98 -1.90 -3.39 16 2 C -0.08 0.08 2.82 71.24 0.20 0.28 16 3 Si 0.77 -2.70 29.78 68.60 2.04 -0.66 16 4 C -0.16 0.05 5.39 -19.85 -0.11 -0.05 16 5 C -0.08 0.27 8.66 22.25 0.19 0.46 16 6 C -0.20 0.70 9.04 22.37 0.20 0.90 16 7 C 0.12 0.33 6.69 22.51 0.15 0.48 16 8 O -0.32 -1.66 9.67 -73.38 -0.71 -2.37 16 9 C 0.04 -0.16 5.22 71.23 0.37 0.21 16 10 C 0.51 0.90 7.91 87.65 0.69 1.59 16 11 O -0.57 -8.03 16.12 16.02 0.26 -7.77 16 12 N -0.69 3.72 5.26 -440.03 -2.32 1.41 16 13 C 0.12 -0.31 4.30 45.52 0.20 -0.11 16 14 H 0.08 0.24 7.50 -2.39 -0.02 0.22 16 15 C -0.14 0.40 7.27 31.21 0.23 0.62 16 16 C -0.06 0.36 3.87 -10.92 -0.04 0.32 16 17 H 0.12 -1.07 8.10 -2.39 -0.02 -1.09 16 18 C -0.08 0.11 5.29 -19.86 -0.11 0.01 16 19 C -0.13 0.00 8.60 22.27 0.19 0.19 16 20 C -0.13 -0.11 10.05 22.27 0.22 0.12 16 21 C -0.14 -0.10 10.05 22.27 0.22 0.12 16 22 C -0.13 0.02 10.05 22.27 0.22 0.24 16 23 C -0.13 0.16 9.71 22.27 0.22 0.38 16 24 C -0.12 0.78 7.29 31.12 0.23 1.00 16 25 C -0.17 -0.76 9.99 22.37 0.22 -0.53 16 26 C -0.06 -0.15 9.60 22.26 0.21 0.06 16 27 H 0.39 -1.13 8.70 -74.06 -0.64 -1.78 16 28 H 0.12 -0.25 7.96 -2.39 -0.02 -0.27 16 29 H -0.28 0.17 7.11 99.48 0.71 0.88 16 30 H -0.31 -1.55 7.11 99.48 0.71 -0.85 16 31 H 0.15 -1.33 4.87 -2.91 -0.01 -1.34 16 32 H 0.17 -1.84 6.30 -2.91 -0.02 -1.86 16 33 H 0.13 -1.38 7.66 -2.38 -0.02 -1.39 16 34 H 0.13 -1.49 7.66 -2.39 -0.02 -1.51 16 35 H 0.42 -5.61 8.70 -92.71 -0.81 -6.42 16 36 H 0.09 -0.17 6.33 -2.39 -0.02 -0.18 16 37 H 0.07 -0.08 8.14 -2.39 -0.02 -0.10 16 38 H 0.13 -0.29 6.68 -2.91 -0.02 -0.31 16 39 H 0.13 -0.26 8.06 -2.91 -0.02 -0.28 16 40 H 0.13 -0.29 8.06 -2.91 -0.02 -0.31 16 41 H 0.13 -0.47 8.06 -2.91 -0.02 -0.49 16 42 H 0.14 -0.76 8.06 -2.91 -0.02 -0.78 16 43 H 0.09 -0.85 8.14 -2.39 -0.02 -0.87 16 44 H 0.10 -0.51 7.71 -2.39 -0.02 -0.53 16 45 H 0.13 0.66 8.06 -2.91 -0.02 0.64 16 46 H 0.13 0.24 8.06 -2.91 -0.02 0.21 16 Total: 0.00 -25.60 382.40 0.70 -24.90 By element: Atomic # 1 Polarization: -18.01 SS G_CDS: -0.40 Total: -18.41 kcal Atomic # 6 Polarization: 2.57 SS G_CDS: 3.72 Total: 6.30 kcal Atomic # 7 Polarization: 3.72 SS G_CDS: -2.32 Total: 1.41 kcal Atomic # 8 Polarization: -11.18 SS G_CDS: -2.35 Total: -13.53 kcal Atomic # 14 Polarization: -2.70 SS G_CDS: 2.04 Total: -0.66 kcal Total: -25.60 0.70 -24.90 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705150_2989410.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 9.610 kcal (2) G-P(sol) polarization free energy of solvation -25.598 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -15.988 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.701 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.897 kcal (6) G-S(sol) free energy of system = (1) + (5) -15.288 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds