Wall clock time and date at job start Tue Mar 9 2021 13:48:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86304 * 109.47134 * 2 1 4 4 C 1.50702 * 109.47034 * 240.00175 * 2 1 3 5 5 C 1.38238 * 119.97400 * 120.02003 * 4 2 1 6 6 C 1.38285 * 120.11615 * 179.97438 * 5 4 2 7 7 C 1.38127 * 120.05040 * 359.68366 * 6 5 4 8 8 C 1.38759 * 119.94263 * 0.59072 * 7 6 5 9 9 O 1.35898 * 120.05292 * 179.70363 * 8 7 6 10 10 C 1.42903 * 117.00500 * 359.72614 * 9 8 7 11 11 C 1.52992 * 109.47388 * 180.02562 * 10 9 8 12 12 C 1.50703 * 109.47147 * 180.02562 * 11 10 9 13 13 O 1.21276 * 119.99967 * 0.02562 * 12 11 10 14 14 N 1.34776 * 119.99949 * 179.97438 * 12 11 10 15 15 C 1.46504 * 120.00067 * 179.97438 * 14 12 11 16 16 H 1.09001 * 112.84798 * 336.20397 * 15 14 12 17 17 C 1.53948 * 113.53259 * 107.50857 * 15 14 12 18 18 C 1.53779 * 87.02011 * 89.19134 * 17 15 14 19 19 H 1.08999 * 113.61380 * 270.76850 * 18 17 15 20 20 C 1.50706 * 113.61233 * 139.94991 * 18 17 15 21 21 C 1.38238 * 119.99727 * 140.86603 * 20 18 17 22 22 C 1.38234 * 119.99693 * 180.02562 * 21 20 18 23 23 C 1.38234 * 120.00240 * 359.97438 * 22 21 20 24 24 C 1.38233 * 120.00037 * 0.26327 * 23 22 21 25 25 C 1.38234 * 120.00207 * 320.88094 * 20 18 17 26 26 C 1.53775 * 113.61516 * 205.00286 * 15 14 12 27 27 C 1.38166 * 119.96988 * 299.99805 * 4 2 1 28 28 H 0.96702 * 114.00371 * 59.99415 * 1 2 3 29 29 H 1.08994 * 109.47452 * 119.99842 * 2 1 3 30 30 H 1.48499 * 109.99980 * 298.68218 * 3 2 1 31 31 H 1.48494 * 110.00249 * 59.99870 * 3 2 1 32 32 H 1.08005 * 119.94594 * 359.97438 * 5 4 2 33 33 H 1.07993 * 119.97932 * 179.97438 * 6 5 4 34 34 H 1.07998 * 120.03094 * 180.32136 * 7 6 5 35 35 H 1.08998 * 109.46548 * 59.99789 * 10 9 8 36 36 H 1.09000 * 109.47007 * 300.00202 * 10 9 8 37 37 H 1.09000 * 109.47206 * 59.99980 * 11 10 9 38 38 H 1.09000 * 109.46983 * 299.99937 * 11 10 9 39 39 H 0.97000 * 119.99911 * 0.02562 * 14 12 11 40 40 H 1.09000 * 113.67195 * 334.65985 * 17 15 14 41 41 H 1.09001 * 113.61348 * 203.71044 * 17 15 14 42 42 H 1.07997 * 119.99846 * 359.97438 * 21 20 18 43 43 H 1.07999 * 119.99751 * 179.97438 * 22 21 20 44 44 H 1.08002 * 119.99744 * 179.97438 * 23 22 21 45 45 H 1.07998 * 120.00391 * 179.72199 * 24 23 22 46 46 H 1.07999 * 120.00008 * 0.02562 * 25 20 18 47 47 H 1.09004 * 113.61623 * 156.33648 * 26 15 14 48 48 H 1.09000 * 113.61403 * 25.44000 * 26 15 14 49 49 H 1.08002 * 120.02757 * 0.04726 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7264 -0.0381 -2.1399 6 6 3.1893 -0.6873 -3.2697 7 6 2.8636 -2.0116 -3.4889 8 6 2.0610 -2.6869 -2.5805 9 8 1.7341 -3.9881 -2.7971 10 6 2.2467 -4.5971 -3.9839 11 6 1.7761 -6.0510 -4.0553 12 6 2.3173 -6.6934 -5.3065 13 8 3.0114 -6.0515 -6.0661 14 7 2.0306 -7.9814 -5.5809 15 6 2.5562 -8.6057 -6.7976 16 1 2.7933 -7.8811 -7.5766 17 6 3.6833 -9.6198 -6.5305 18 6 2.5832 -10.6858 -6.3964 19 1 2.1987 -10.7912 -5.3819 20 6 2.9428 -12.0069 -7.0262 21 6 2.5877 -13.1889 -6.4034 22 6 2.9180 -14.4006 -6.9808 23 6 3.6029 -14.4305 -8.1812 24 6 3.9623 -13.2486 -8.8015 25 6 3.6279 -12.0368 -8.2264 26 6 1.7130 -9.7915 -7.2952 27 6 1.5972 -2.0332 -1.4485 28 1 -0.3934 0.4418 -0.7650 29 1 1.7924 -0.5138 0.8899 30 1 1.5879 2.4586 -1.2242 31 1 1.5615 2.4680 1.2084 32 1 2.9864 0.9959 -1.9677 33 1 3.8100 -0.1599 -3.9789 34 1 3.2296 -2.5197 -4.3688 35 1 3.3362 -4.5678 -3.9657 36 1 1.8833 -4.0546 -4.8567 37 1 0.6866 -6.0798 -4.0736 38 1 2.1393 -6.5937 -3.1825 39 1 1.4757 -8.4949 -4.9732 40 1 4.2277 -9.4352 -5.6044 41 1 4.3413 -9.7765 -7.3853 42 1 2.0530 -13.1655 -5.4654 43 1 2.6410 -15.3241 -6.4941 44 1 3.8613 -15.3773 -8.6321 45 1 4.5013 -13.2718 -9.7371 46 1 3.9059 -11.1133 -8.7126 47 1 1.8312 -9.9953 -8.3594 48 1 0.6690 -9.7452 -6.9855 49 1 0.9756 -2.5578 -0.7380 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705150_4549614.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:48:07 Heat of formation + Delta-G solvation = -28.340637 kcal Electronic energy + Delta-G solvation = -28978.949647 eV Core-core repulsion = 24838.403902 eV Total energy + Delta-G solvation = -4140.545746 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.166 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -41.71448 -41.23813 -40.36870 -39.18786 -38.71286 -37.32170 -34.68078 -33.31512 -32.43329 -31.92210 -31.60747 -30.72190 -27.11688 -26.84556 -26.45599 -25.15623 -23.64380 -23.57864 -22.55206 -22.12794 -21.52032 -20.19612 -19.37472 -18.40644 -17.97351 -17.64674 -17.49366 -17.13549 -17.08850 -16.80223 -16.28127 -16.23490 -16.13127 -15.92240 -15.49949 -15.13009 -15.01457 -14.86458 -14.56700 -14.36816 -14.34153 -14.14511 -14.04698 -13.98800 -13.58991 -13.21504 -13.18216 -12.91853 -12.85211 -12.78810 -12.37658 -12.25629 -11.91840 -11.83541 -11.81639 -11.79959 -11.53730 -11.27427 -11.03745 -10.63440 -10.19908 -9.88211 -9.84736 -9.59527 -9.20907 -4.93183 0.25215 0.39542 0.44960 0.47042 1.28769 1.46666 1.62655 1.64719 1.98141 2.42296 2.71281 2.79446 3.33494 3.38903 3.47158 3.56446 3.60857 3.65557 3.79675 3.81351 3.85023 3.91677 3.95857 4.07654 4.08419 4.13889 4.21423 4.23940 4.28363 4.35446 4.48586 4.54438 4.55570 4.57077 4.60446 4.60972 4.62419 4.72268 4.73189 4.85803 4.89090 5.01379 5.02122 5.06858 5.11419 5.30558 5.41863 5.43289 5.48101 5.54711 5.61107 5.68566 5.72038 6.06920 6.29506 6.40438 6.41751 7.05056 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.076 4.076 3 Si 0.689 3.311 4 C -0.081 4.081 5 C -0.155 4.155 6 C -0.073 4.073 7 C -0.202 4.202 8 C 0.132 3.868 9 O -0.316 6.316 10 C 0.075 3.925 11 C -0.142 4.142 12 C 0.524 3.476 13 O -0.536 6.536 14 N -0.711 5.711 15 C 0.118 3.882 16 H 0.106 0.894 17 C -0.143 4.143 18 C -0.074 4.074 19 H 0.097 0.903 20 C -0.073 4.073 21 C -0.117 4.117 22 C -0.118 4.118 23 C -0.124 4.124 24 C -0.117 4.117 25 C -0.117 4.117 26 C -0.135 4.135 27 C -0.126 4.126 28 H 0.376 0.624 29 H 0.120 0.880 30 H -0.260 1.260 31 H -0.257 1.257 32 H 0.129 0.871 33 H 0.131 0.869 34 H 0.133 0.867 35 H 0.073 0.927 36 H 0.072 0.928 37 H 0.108 0.892 38 H 0.108 0.892 39 H 0.404 0.596 40 H 0.074 0.926 41 H 0.096 0.904 42 H 0.120 0.880 43 H 0.122 0.878 44 H 0.121 0.879 45 H 0.122 0.878 46 H 0.122 0.878 47 H 0.099 0.901 48 H 0.077 0.923 49 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.843 -2.673 -0.568 2.859 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.185 4.185 3 Si 0.590 3.410 4 C -0.081 4.081 5 C -0.172 4.172 6 C -0.091 4.091 7 C -0.221 4.221 8 C 0.087 3.913 9 O -0.230 6.230 10 C -0.001 4.001 11 C -0.182 4.182 12 C 0.310 3.690 13 O -0.412 6.412 14 N -0.363 5.363 15 C 0.013 3.987 16 H 0.124 0.876 17 C -0.182 4.182 18 C -0.092 4.092 19 H 0.115 0.885 20 C -0.073 4.073 21 C -0.135 4.135 22 C -0.136 4.136 23 C -0.142 4.142 24 C -0.135 4.135 25 C -0.135 4.135 26 C -0.173 4.173 27 C -0.144 4.144 28 H 0.224 0.776 29 H 0.138 0.862 30 H -0.185 1.185 31 H -0.182 1.182 32 H 0.146 0.854 33 H 0.149 0.851 34 H 0.150 0.850 35 H 0.092 0.908 36 H 0.091 0.909 37 H 0.126 0.874 38 H 0.126 0.874 39 H 0.238 0.762 40 H 0.093 0.907 41 H 0.114 0.886 42 H 0.138 0.862 43 H 0.140 0.860 44 H 0.139 0.861 45 H 0.140 0.860 46 H 0.140 0.860 47 H 0.117 0.883 48 H 0.096 0.904 49 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 1.101 -1.806 -0.453 2.163 hybrid contribution -1.190 -0.700 -0.487 1.464 sum -0.089 -2.507 -0.941 2.679 Atomic orbital electron populations 1.86602 1.17577 1.80000 1.49320 1.25076 0.84064 1.11094 0.98311 0.94889 0.91755 0.74201 0.80195 1.20069 0.97670 0.93836 0.96551 1.20925 1.00814 1.00029 0.95461 1.20929 0.97852 0.93671 0.96666 1.21403 1.03015 0.96476 1.01175 1.18955 0.94644 0.83193 0.94504 1.85974 1.71156 1.22756 1.43135 1.22411 0.99367 0.92036 0.86288 1.21469 1.03941 0.95458 0.97287 1.20300 0.80079 0.81663 0.86954 1.90753 1.37840 1.62689 1.49930 1.45635 1.53612 1.12014 1.25028 1.21921 0.94868 0.94338 0.87602 0.87572 1.23590 0.96551 0.94645 1.03387 1.21597 0.97532 0.90897 0.99178 0.88497 1.19678 0.98235 0.94247 0.95105 1.21074 1.00343 0.92074 1.00005 1.21190 0.98561 0.97953 0.95892 1.21207 0.98798 0.98373 0.95811 1.21185 0.99819 0.92515 1.00017 1.21015 0.98930 0.98052 0.95527 1.23424 0.99064 0.93985 1.00852 1.20237 1.03174 0.93982 0.97048 0.77597 0.86206 1.18484 1.18225 0.85398 0.85149 0.84968 0.90850 0.90931 0.87396 0.87379 0.76160 0.90679 0.88592 0.86170 0.86019 0.86059 0.85979 0.85984 0.88274 0.90431 0.84828 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.90 12.77 -35.23 -0.45 -1.35 16 2 C -0.08 -0.02 2.82 36.01 0.10 0.08 16 3 Si 0.69 -0.45 29.79 -169.99 -5.06 -5.52 16 4 C -0.08 -0.08 5.39 -104.65 -0.56 -0.64 16 5 C -0.15 -0.04 8.67 -39.56 -0.34 -0.38 16 6 C -0.07 -0.03 10.04 -39.60 -0.40 -0.43 16 7 C -0.20 -0.26 9.04 -39.43 -0.36 -0.62 16 8 C 0.13 0.30 6.69 -39.22 -0.26 0.03 16 9 O -0.32 -0.60 10.14 -19.42 -0.20 -0.79 16 10 C 0.07 0.02 4.03 37.15 0.15 0.17 16 11 C -0.14 0.27 6.07 -27.89 -0.17 0.10 16 12 C 0.52 0.04 7.83 -10.98 -0.09 -0.05 16 13 O -0.54 -2.19 15.58 5.56 0.09 -2.10 16 14 N -0.71 1.47 5.26 -52.93 -0.28 1.20 16 15 C 0.12 -0.16 4.33 -67.03 -0.29 -0.45 16 16 H 0.11 0.04 7.47 -51.93 -0.39 -0.35 16 17 C -0.14 0.20 7.27 -25.83 -0.19 0.02 16 18 C -0.07 0.15 3.85 -90.96 -0.35 -0.20 16 19 H 0.10 -0.28 8.09 -51.93 -0.42 -0.70 16 20 C -0.07 0.01 5.29 -104.62 -0.55 -0.54 16 21 C -0.12 -0.01 9.71 -39.58 -0.38 -0.39 16 22 C -0.12 -0.03 10.05 -39.58 -0.40 -0.43 16 23 C -0.12 -0.05 10.05 -39.58 -0.40 -0.44 16 24 C -0.12 -0.03 10.05 -39.58 -0.40 -0.43 16 25 C -0.12 0.00 8.54 -39.58 -0.34 -0.33 16 26 C -0.14 0.32 7.29 -25.92 -0.19 0.13 16 27 C -0.13 -0.26 9.55 -39.44 -0.38 -0.64 16 28 H 0.38 -0.41 8.70 45.56 0.40 -0.01 16 29 H 0.12 -0.06 7.96 -51.93 -0.41 -0.47 16 30 H -0.26 -0.34 7.11 56.52 0.40 0.06 16 31 H -0.26 -0.66 7.11 56.52 0.40 -0.26 16 32 H 0.13 -0.20 4.87 -52.48 -0.26 -0.46 16 33 H 0.13 -0.22 8.06 -52.49 -0.42 -0.64 16 34 H 0.13 0.05 6.30 -52.49 -0.33 -0.28 16 35 H 0.07 0.04 7.61 -51.93 -0.39 -0.35 16 36 H 0.07 0.05 7.63 -51.93 -0.40 -0.35 16 37 H 0.11 -0.35 8.14 -51.93 -0.42 -0.78 16 38 H 0.11 -0.36 8.14 -51.93 -0.42 -0.78 16 39 H 0.40 -1.86 8.70 -40.82 -0.36 -2.22 16 40 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 41 H 0.10 -0.14 6.39 -51.93 -0.33 -0.47 16 42 H 0.12 -0.18 8.05 -52.49 -0.42 -0.60 16 43 H 0.12 -0.15 8.06 -52.49 -0.42 -0.58 16 44 H 0.12 -0.14 8.06 -52.49 -0.42 -0.56 16 45 H 0.12 -0.16 8.06 -52.49 -0.42 -0.58 16 46 H 0.12 -0.17 6.73 -52.49 -0.35 -0.53 16 47 H 0.10 -0.22 7.64 -51.93 -0.40 -0.62 16 48 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 49 H 0.13 0.27 8.06 -52.49 -0.42 -0.16 16 LS Contribution 403.28 15.07 6.08 6.08 Total: 0.00 -8.06 403.28 -12.68 -20.74 By element: Atomic # 1 Polarization: -5.74 SS G_CDS: -7.07 Total: -12.81 kcal Atomic # 6 Polarization: 0.34 SS G_CDS: -5.79 Total: -5.45 kcal Atomic # 7 Polarization: 1.47 SS G_CDS: -0.28 Total: 1.20 kcal Atomic # 8 Polarization: -3.68 SS G_CDS: -0.56 Total: -4.24 kcal Atomic # 14 Polarization: -0.45 SS G_CDS: -5.06 Total: -5.52 kcal Total LS contribution 6.08 Total: 6.08 kcal Total: -8.06 -12.68 -20.74 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705150_4549614.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -7.602 kcal (2) G-P(sol) polarization free energy of solvation -8.059 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -15.662 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.679 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.738 kcal (6) G-S(sol) free energy of system = (1) + (5) -28.341 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds