Wall clock time and date at job start Tue Mar 9 2021 13:48:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.46997 * 2 1 4 4 C 1.50694 * 109.47118 * 120.00721 * 2 1 3 5 5 C 1.38239 * 119.94726 * 64.72722 * 4 2 1 6 6 C 1.38162 * 120.05788 * 179.72583 * 5 4 2 7 7 N 1.48003 * 120.03173 * 180.29511 * 6 5 4 8 8 O 1.21796 * 120.00043 * 0.24769 * 7 6 5 9 9 O 1.21798 * 119.99960 * 180.25273 * 7 6 5 10 10 C 1.38723 * 119.94241 * 0.54351 * 6 5 4 11 11 O 1.35895 * 120.05407 * 179.75075 * 10 6 5 12 12 C 1.42904 * 116.99507 * 179.97438 * 11 10 6 13 13 C 1.50703 * 109.46894 * 179.97438 * 12 11 10 14 14 O 1.21277 * 119.99871 * 359.97438 * 13 12 11 15 15 N 1.34774 * 119.99772 * 179.97438 * 13 12 11 16 16 C 1.46507 * 119.99965 * 179.97438 * 15 13 12 17 17 H 1.08996 * 112.84455 * 23.81000 * 16 15 13 18 18 C 1.53776 * 113.61375 * 155.00145 * 16 15 13 19 19 C 1.53781 * 87.08188 * 89.11617 * 18 16 15 20 20 H 1.08994 * 113.61858 * 270.88411 * 19 18 16 21 21 C 1.50705 * 113.61524 * 140.06070 * 19 18 16 22 22 C 1.38231 * 119.99852 * 299.73099 * 21 19 18 23 23 C 1.38235 * 119.99682 * 179.80810 * 22 21 19 24 24 C 1.38233 * 120.00210 * 0.41996 * 23 22 21 25 25 C 1.38242 * 119.99964 * 359.81370 * 24 23 22 26 26 C 1.38230 * 119.99881 * 120.00408 * 21 19 18 27 27 C 1.53783 * 113.61535 * 252.50042 * 16 15 13 28 28 C 1.38753 * 119.88437 * 359.72768 * 10 6 5 29 29 C 1.38121 * 119.94617 * 359.97438 * 28 10 6 30 30 H 0.96708 * 114.00246 * 59.99398 * 1 2 3 31 31 H 1.09004 * 109.46690 * 240.00803 * 2 1 3 32 32 H 1.48506 * 109.99834 * 60.00805 * 3 2 1 33 33 H 1.48502 * 110.00011 * 181.32069 * 3 2 1 34 34 H 1.08007 * 119.97243 * 359.97330 * 5 4 2 35 35 H 1.09000 * 109.47122 * 299.99467 * 12 11 10 36 36 H 1.09001 * 109.47629 * 59.99635 * 12 11 10 37 37 H 0.96998 * 120.00271 * 0.02562 * 15 13 12 38 38 H 1.09000 * 113.61417 * 203.66658 * 18 16 15 39 39 H 1.09003 * 113.61726 * 334.48674 * 18 16 15 40 40 H 1.07992 * 120.00360 * 359.97438 * 22 21 19 41 41 H 1.08001 * 119.99983 * 180.20847 * 23 22 21 42 42 H 1.07998 * 120.00316 * 179.78917 * 24 23 22 43 43 H 1.07996 * 120.00010 * 179.97438 * 25 24 23 44 44 H 1.08004 * 119.99933 * 359.97438 * 26 21 19 45 45 H 1.09008 * 113.61348 * 25.43369 * 27 16 15 46 46 H 1.09000 * 113.61135 * 156.32985 * 27 16 15 47 47 H 1.07996 * 120.02247 * 180.02562 * 28 10 6 48 48 H 1.08005 * 119.97461 * 180.02562 * 29 28 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7105 1.2303 5 6 1.6792 -2.0592 1.3996 6 6 2.1436 -2.7141 2.5240 7 7 1.8789 -4.1594 2.7016 8 8 1.2554 -4.7730 1.8541 9 8 2.2846 -4.7353 3.6953 10 6 2.8536 -2.0148 3.4890 11 8 3.3070 -2.6557 4.5983 12 6 4.0311 -1.8726 5.5494 13 6 4.4503 -2.7458 6.7039 14 8 4.1574 -3.9227 6.7116 15 7 5.1507 -2.2189 7.7277 16 6 5.5578 -3.0677 8.8503 17 1 5.6177 -4.1227 8.5832 18 6 6.7990 -2.5496 9.5958 19 6 5.8336 -1.7468 10.4837 20 1 5.6061 -0.7542 10.0951 21 6 6.2243 -1.7300 11.9391 22 6 6.3129 -2.9154 12.6446 23 6 6.6751 -2.9004 13.9785 24 6 6.9404 -1.6992 14.6092 25 6 6.8472 -0.5134 13.9049 26 6 6.4887 -0.5288 12.5699 27 6 4.7675 -2.8013 10.1423 28 6 3.1005 -0.6600 3.3193 29 6 2.6394 -0.0112 2.1905 30 1 -0.3934 0.4418 -0.7650 31 1 1.7923 -0.5137 -0.8901 32 1 1.5616 2.4678 1.2086 33 1 3.5346 1.7703 -0.0322 34 1 1.1222 -2.6022 0.6504 35 1 4.9158 -1.4495 5.0735 36 1 3.3953 -1.0667 5.9160 37 1 5.3847 -1.2776 7.7217 38 1 7.3419 -3.3273 10.1330 39 1 7.4492 -1.9269 8.9813 40 1 6.1016 -3.8535 12.1530 41 1 6.7476 -3.8268 14.5289 42 1 7.2202 -1.6872 15.6523 43 1 7.0541 0.4251 14.3977 44 1 6.4156 0.3977 12.0197 45 1 3.7769 -2.3806 9.9693 46 1 4.7550 -3.6478 10.8289 47 1 3.6534 -0.1134 4.0689 48 1 2.8317 1.0433 2.0578 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705150_4549638.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:48:49 Heat of formation + Delta-G solvation = -7.923473 kcal Electronic energy + Delta-G solvation = -33985.173652 eV Core-core repulsion = 29170.034444 eV Total energy + Delta-G solvation = -4815.139208 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 385.145 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -43.03236 -41.90007 -41.46890 -40.41511 -39.51977 -38.63507 -37.56700 -37.13127 -34.75165 -33.56085 -32.51974 -32.00541 -31.74721 -29.95425 -27.61098 -26.86839 -26.77581 -26.10004 -24.23891 -23.59893 -22.79307 -22.52081 -21.99317 -20.46673 -20.21940 -19.48970 -19.12478 -18.73008 -18.58422 -18.32820 -18.02037 -17.67755 -17.50778 -17.04554 -16.64838 -16.27629 -16.20994 -16.05719 -15.78047 -15.53677 -15.30093 -15.08888 -14.73946 -14.53167 -14.48537 -14.33624 -14.17231 -14.02355 -13.89104 -13.60710 -13.19269 -13.07291 -12.85650 -12.82651 -12.52143 -12.27264 -12.21449 -12.20463 -11.85911 -11.81968 -11.80778 -11.73786 -11.29685 -11.01447 -10.94904 -10.63406 -10.25727 -9.91441 -9.85995 -9.61125 -5.23799 -1.14822 -0.39442 0.36935 0.38176 0.45848 0.51713 0.98175 1.04237 1.36170 1.37156 1.64338 1.89814 2.14360 2.78033 2.87818 2.99739 3.08183 3.29270 3.34096 3.43426 3.50509 3.52130 3.52489 3.58463 3.64911 3.71576 3.80128 3.94469 4.03284 4.06364 4.11591 4.12829 4.19930 4.26791 4.38667 4.46509 4.52745 4.58839 4.61368 4.66373 4.68725 4.82579 4.87395 4.89885 4.98134 5.05297 5.10076 5.35042 5.44229 5.53415 5.60051 5.66732 5.69184 6.05652 6.20711 6.37601 6.94005 6.99119 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.071 4.071 3 Si 0.691 3.309 4 C -0.111 4.111 5 C 0.013 3.987 6 C -0.074 4.074 7 N 0.029 4.971 8 O -0.175 6.175 9 O -0.117 6.117 10 C 0.200 3.800 11 O -0.252 6.252 12 C 0.030 3.970 13 C 0.517 3.483 14 O -0.492 6.492 15 N -0.711 5.711 16 C 0.121 3.879 17 H 0.109 0.891 18 C -0.134 4.134 19 C -0.074 4.074 20 H 0.096 0.904 21 C -0.073 4.073 22 C -0.117 4.117 23 C -0.117 4.117 24 C -0.124 4.124 25 C -0.118 4.118 26 C -0.117 4.117 27 C -0.144 4.144 28 C -0.208 4.208 29 C -0.031 4.031 30 H 0.388 0.612 31 H 0.082 0.918 32 H -0.248 1.248 33 H -0.251 1.251 34 H 0.166 0.834 35 H 0.102 0.898 36 H 0.102 0.898 37 H 0.402 0.598 38 H 0.100 0.900 39 H 0.077 0.923 40 H 0.123 0.877 41 H 0.123 0.877 42 H 0.121 0.879 43 H 0.122 0.878 44 H 0.120 0.880 45 H 0.075 0.925 46 H 0.098 0.902 47 H 0.156 0.844 48 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.260 10.682 -1.620 11.285 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.181 4.181 3 Si 0.591 3.409 4 C -0.113 4.113 5 C -0.006 4.006 6 C -0.159 4.159 7 N 0.550 4.450 8 O -0.384 6.384 9 O -0.341 6.341 10 C 0.151 3.849 11 O -0.161 6.161 12 C -0.048 4.048 13 C 0.300 3.700 14 O -0.364 6.364 15 N -0.365 5.365 16 C 0.016 3.984 17 H 0.127 0.873 18 C -0.172 4.172 19 C -0.092 4.092 20 H 0.114 0.886 21 C -0.073 4.073 22 C -0.135 4.135 23 C -0.135 4.135 24 C -0.142 4.142 25 C -0.136 4.136 26 C -0.135 4.135 27 C -0.182 4.182 28 C -0.227 4.227 29 C -0.048 4.048 30 H 0.236 0.764 31 H 0.100 0.900 32 H -0.172 1.172 33 H -0.176 1.176 34 H 0.184 0.816 35 H 0.120 0.880 36 H 0.120 0.880 37 H 0.236 0.764 38 H 0.119 0.881 39 H 0.096 0.904 40 H 0.141 0.859 41 H 0.141 0.859 42 H 0.139 0.861 43 H 0.140 0.860 44 H 0.138 0.862 45 H 0.094 0.906 46 H 0.116 0.884 47 H 0.174 0.826 48 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 3.691 10.545 -0.722 11.196 hybrid contribution 0.174 -0.026 0.346 0.388 sum 3.865 10.519 -0.376 11.213 Atomic orbital electron populations 1.86497 1.16674 1.81990 1.50024 1.24645 0.86289 1.10676 0.96512 0.94647 0.80817 0.77603 0.87845 1.19234 1.01889 0.92799 0.97334 1.20816 0.92126 0.93789 0.93881 1.20572 1.12602 0.82626 1.00054 1.43298 0.99006 1.02339 1.00404 1.94550 1.39502 1.66165 1.38191 1.94698 1.51939 1.69054 1.18407 1.18648 0.89970 0.90717 0.85606 1.86502 1.66786 1.35493 1.27343 1.22731 0.97982 0.94394 0.89719 1.19785 0.78905 0.88513 0.82775 1.90869 1.52079 1.15700 1.77728 1.45446 1.57157 1.13263 1.20588 1.21898 0.95229 0.96293 0.84998 0.87284 1.23428 0.95956 1.00316 0.97499 1.21599 0.96969 0.99130 0.91496 0.88570 1.19663 0.99440 0.93295 0.94920 1.21030 1.00161 0.97823 0.94463 1.21193 0.99188 0.98205 0.94904 1.21212 1.00173 0.92678 1.00094 1.21187 0.99593 0.98318 0.94531 1.21055 1.00103 0.97430 0.94927 1.23579 0.98391 0.99334 0.96911 1.21205 1.07738 0.92180 1.01561 1.21143 0.92546 0.99687 0.91472 0.76394 0.89966 1.17215 1.17558 0.81642 0.88013 0.88030 0.76376 0.88126 0.90443 0.85901 0.85941 0.86050 0.86038 0.86235 0.90637 0.88387 0.82627 0.84224 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.90 12.81 -35.23 -0.45 0.45 16 2 C -0.07 0.17 2.79 36.00 0.10 0.27 16 3 Si 0.69 -2.59 29.84 -169.99 -5.07 -7.67 16 4 C -0.11 -0.01 5.39 -104.61 -0.56 -0.57 16 5 C 0.01 0.02 9.18 -39.61 -0.36 -0.34 16 6 C -0.07 -0.29 6.87 -79.80 -0.55 -0.84 16 7 N 0.03 0.21 4.45 34.03 0.15 0.36 16 8 O -0.18 -1.34 18.45 -29.46 -0.54 -1.88 16 9 O -0.12 -1.07 17.24 -36.49 -0.63 -1.70 16 10 C 0.20 0.40 6.67 -39.21 -0.26 0.14 16 11 O -0.25 -0.76 7.68 -49.77 -0.38 -1.14 16 12 C 0.03 -0.05 5.22 36.01 0.19 0.13 16 13 C 0.52 0.48 7.91 -10.98 -0.09 0.39 16 14 O -0.49 -3.19 16.10 -14.35 -0.23 -3.42 16 15 N -0.71 1.61 5.26 -53.02 -0.28 1.33 16 16 C 0.12 -0.15 4.32 -67.12 -0.29 -0.45 16 17 H 0.11 0.08 7.46 -51.93 -0.39 -0.31 16 18 C -0.13 0.35 7.29 -25.92 -0.19 0.16 16 19 C -0.07 0.16 3.85 -90.96 -0.35 -0.19 16 20 H 0.10 -0.32 8.09 -51.93 -0.42 -0.74 16 21 C -0.07 0.02 5.29 -104.62 -0.55 -0.53 16 22 C -0.12 0.00 8.63 -39.58 -0.34 -0.34 16 23 C -0.12 -0.03 10.05 -39.58 -0.40 -0.43 16 24 C -0.12 -0.04 10.05 -39.58 -0.40 -0.44 16 25 C -0.12 -0.02 10.05 -39.58 -0.40 -0.42 16 26 C -0.12 0.01 9.71 -39.59 -0.38 -0.37 16 27 C -0.14 0.20 7.25 -25.92 -0.19 0.01 16 28 C -0.21 0.28 9.04 -39.43 -0.36 -0.07 16 29 C -0.03 0.03 8.66 -39.61 -0.34 -0.31 16 30 H 0.39 -2.56 8.74 45.56 0.40 -2.16 16 31 H 0.08 -0.33 7.96 -51.93 -0.41 -0.74 16 32 H -0.25 0.27 7.05 56.52 0.40 0.67 16 33 H -0.25 0.42 7.11 56.52 0.40 0.82 16 34 H 0.17 0.19 7.61 -52.48 -0.40 -0.21 16 35 H 0.10 -0.52 7.66 -51.93 -0.40 -0.92 16 36 H 0.10 -0.50 7.66 -51.93 -0.40 -0.89 16 37 H 0.40 -2.25 8.70 -40.82 -0.36 -2.61 16 38 H 0.10 -0.23 7.73 -51.93 -0.40 -0.63 16 39 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 40 H 0.12 -0.16 6.65 -52.49 -0.35 -0.51 16 41 H 0.12 -0.15 8.06 -52.49 -0.42 -0.57 16 42 H 0.12 -0.14 8.06 -52.49 -0.42 -0.56 16 43 H 0.12 -0.17 8.06 -52.49 -0.42 -0.59 16 44 H 0.12 -0.21 8.06 -52.48 -0.42 -0.64 16 45 H 0.07 -0.05 8.14 -51.92 -0.42 -0.47 16 46 H 0.10 -0.13 6.31 -51.93 -0.33 -0.45 16 47 H 0.16 -0.80 6.30 -52.49 -0.33 -1.13 16 48 H 0.14 -0.37 4.86 -52.48 -0.26 -0.62 16 LS Contribution 408.46 15.07 6.16 6.16 Total: 0.00 -12.86 408.46 -12.78 -25.64 By element: Atomic # 1 Polarization: -8.17 SS G_CDS: -5.77 Total: -13.94 kcal Atomic # 6 Polarization: 1.52 SS G_CDS: -5.72 Total: -4.20 kcal Atomic # 7 Polarization: 1.82 SS G_CDS: -0.13 Total: 1.70 kcal Atomic # 8 Polarization: -5.44 SS G_CDS: -2.24 Total: -7.68 kcal Atomic # 14 Polarization: -2.59 SS G_CDS: -5.07 Total: -7.67 kcal Total LS contribution 6.16 Total: 6.16 kcal Total: -12.86 -12.78 -25.64 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705150_4549638.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 17.717 kcal (2) G-P(sol) polarization free energy of solvation -12.859 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 4.858 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.781 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.640 kcal (6) G-S(sol) free energy of system = (1) + (5) -7.923 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds