Wall clock time and date at job start Tue Mar 9 2021 13:48:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.46997 * 2 1 4 4 C 1.50694 * 109.47118 * 120.00721 * 2 1 3 5 5 C 1.38239 * 119.94726 * 64.72722 * 4 2 1 6 6 C 1.38162 * 120.05788 * 179.72583 * 5 4 2 7 7 N 1.48003 * 120.03173 * 180.29511 * 6 5 4 8 8 O 1.21796 * 120.00043 * 0.24769 * 7 6 5 9 9 O 1.21798 * 119.99960 * 180.25273 * 7 6 5 10 10 C 1.38723 * 119.94241 * 0.54351 * 6 5 4 11 11 O 1.35895 * 120.05407 * 179.75075 * 10 6 5 12 12 C 1.42904 * 116.99507 * 179.97438 * 11 10 6 13 13 C 1.50703 * 109.46894 * 179.97438 * 12 11 10 14 14 O 1.21277 * 119.99871 * 359.97438 * 13 12 11 15 15 N 1.34774 * 119.99772 * 179.97438 * 13 12 11 16 16 C 1.46507 * 119.99965 * 179.97438 * 15 13 12 17 17 H 1.08996 * 112.84455 * 23.81000 * 16 15 13 18 18 C 1.53776 * 113.61375 * 155.00145 * 16 15 13 19 19 C 1.53781 * 87.08188 * 89.11617 * 18 16 15 20 20 H 1.08994 * 113.61858 * 270.88411 * 19 18 16 21 21 C 1.50705 * 113.61524 * 140.06070 * 19 18 16 22 22 C 1.38231 * 119.99852 * 299.73099 * 21 19 18 23 23 C 1.38235 * 119.99682 * 179.80810 * 22 21 19 24 24 C 1.38233 * 120.00210 * 0.41996 * 23 22 21 25 25 C 1.38242 * 119.99964 * 359.81370 * 24 23 22 26 26 C 1.38230 * 119.99881 * 120.00408 * 21 19 18 27 27 C 1.53783 * 113.61535 * 252.50042 * 16 15 13 28 28 C 1.38753 * 119.88437 * 359.72768 * 10 6 5 29 29 C 1.38121 * 119.94617 * 359.97438 * 28 10 6 30 30 H 0.96708 * 114.00246 * 59.99398 * 1 2 3 31 31 H 1.09004 * 109.46690 * 240.00803 * 2 1 3 32 32 H 1.48506 * 109.99834 * 60.00805 * 3 2 1 33 33 H 1.48502 * 110.00011 * 181.32069 * 3 2 1 34 34 H 1.08007 * 119.97243 * 359.97330 * 5 4 2 35 35 H 1.09000 * 109.47122 * 299.99467 * 12 11 10 36 36 H 1.09001 * 109.47629 * 59.99635 * 12 11 10 37 37 H 0.96998 * 120.00271 * 0.02562 * 15 13 12 38 38 H 1.09000 * 113.61417 * 203.66658 * 18 16 15 39 39 H 1.09003 * 113.61726 * 334.48674 * 18 16 15 40 40 H 1.07992 * 120.00360 * 359.97438 * 22 21 19 41 41 H 1.08001 * 119.99983 * 180.20847 * 23 22 21 42 42 H 1.07998 * 120.00316 * 179.78917 * 24 23 22 43 43 H 1.07996 * 120.00010 * 179.97438 * 25 24 23 44 44 H 1.08004 * 119.99933 * 359.97438 * 26 21 19 45 45 H 1.09008 * 113.61348 * 25.43369 * 27 16 15 46 46 H 1.09000 * 113.61135 * 156.32985 * 27 16 15 47 47 H 1.07996 * 120.02247 * 180.02562 * 28 10 6 48 48 H 1.08005 * 119.97461 * 180.02562 * 29 28 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7105 1.2303 5 6 1.6792 -2.0592 1.3996 6 6 2.1436 -2.7141 2.5240 7 7 1.8789 -4.1594 2.7016 8 8 1.2554 -4.7730 1.8541 9 8 2.2846 -4.7353 3.6953 10 6 2.8536 -2.0148 3.4890 11 8 3.3070 -2.6557 4.5983 12 6 4.0311 -1.8726 5.5494 13 6 4.4503 -2.7458 6.7039 14 8 4.1574 -3.9227 6.7116 15 7 5.1507 -2.2189 7.7277 16 6 5.5578 -3.0677 8.8503 17 1 5.6177 -4.1227 8.5832 18 6 6.7990 -2.5496 9.5958 19 6 5.8336 -1.7468 10.4837 20 1 5.6061 -0.7542 10.0951 21 6 6.2243 -1.7300 11.9391 22 6 6.3129 -2.9154 12.6446 23 6 6.6751 -2.9004 13.9785 24 6 6.9404 -1.6992 14.6092 25 6 6.8472 -0.5134 13.9049 26 6 6.4887 -0.5288 12.5699 27 6 4.7675 -2.8013 10.1423 28 6 3.1005 -0.6600 3.3193 29 6 2.6394 -0.0112 2.1905 30 1 -0.3934 0.4418 -0.7650 31 1 1.7923 -0.5137 -0.8901 32 1 1.5616 2.4678 1.2086 33 1 3.5346 1.7703 -0.0322 34 1 1.1222 -2.6022 0.6504 35 1 4.9158 -1.4495 5.0735 36 1 3.3953 -1.0667 5.9160 37 1 5.3847 -1.2776 7.7217 38 1 7.3419 -3.3273 10.1330 39 1 7.4492 -1.9269 8.9813 40 1 6.1016 -3.8535 12.1530 41 1 6.7476 -3.8268 14.5289 42 1 7.2202 -1.6872 15.6523 43 1 7.0541 0.4251 14.3977 44 1 6.4156 0.3977 12.0197 45 1 3.7769 -2.3806 9.9693 46 1 4.7550 -3.6478 10.8289 47 1 3.6534 -0.1134 4.0689 48 1 2.8317 1.0433 2.0578 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705150_4549638.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:48:48 Heat of formation + Delta-G solvation = -8.228973 kcal Electronic energy + Delta-G solvation = -33985.186899 eV Core-core repulsion = 29170.034444 eV Total energy + Delta-G solvation = -4815.152455 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 385.145 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -43.38369 -41.95830 -41.46313 -40.41589 -39.49117 -38.63019 -37.65350 -37.39310 -34.76541 -33.63578 -32.47144 -31.94906 -31.69172 -29.85242 -27.91290 -26.73986 -26.67997 -25.99480 -24.29491 -23.55954 -22.89055 -22.46892 -21.97518 -20.56195 -20.15891 -19.86677 -19.22862 -18.75001 -18.66621 -18.39756 -17.98226 -17.66461 -17.48785 -16.96191 -16.55248 -16.20533 -16.14375 -15.98481 -15.82580 -15.47511 -15.21656 -15.03945 -14.64531 -14.46101 -14.35738 -14.23154 -14.07597 -13.96360 -13.85097 -13.49717 -13.14250 -13.05285 -12.76876 -12.76376 -12.72033 -12.43547 -12.33102 -12.20376 -12.16796 -11.98842 -11.76487 -11.70651 -11.20443 -11.11631 -10.98778 -10.40401 -10.22248 -9.88760 -9.82292 -9.56058 -4.89624 -1.41584 -0.37191 0.04342 0.24611 0.42336 0.49499 1.09179 1.27191 1.35914 1.68408 1.88973 1.91259 2.21329 2.82612 2.96748 3.06684 3.24277 3.43818 3.45218 3.49890 3.53612 3.65289 3.71183 3.79855 3.89452 3.92028 3.93894 4.05054 4.12300 4.14575 4.22824 4.23779 4.30250 4.39003 4.48763 4.55723 4.61815 4.66287 4.68848 4.74524 4.80339 4.94013 4.94904 4.98088 5.09972 5.10625 5.12868 5.17600 5.46218 5.58256 5.62999 5.64101 5.73791 6.12187 6.36451 6.37436 6.85897 7.07665 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.567 6.567 2 C -0.088 4.088 3 Si 0.779 3.221 4 C -0.117 4.117 5 C 0.002 3.998 6 C -0.101 4.101 7 N 0.034 4.966 8 O -0.190 6.190 9 O -0.173 6.173 10 C 0.194 3.806 11 O -0.287 6.287 12 C 0.023 3.977 13 C 0.512 3.488 14 O -0.562 6.562 15 N -0.689 5.689 16 C 0.116 3.884 17 H 0.081 0.919 18 C -0.122 4.122 19 C -0.063 4.063 20 H 0.117 0.883 21 C -0.080 4.080 22 C -0.129 4.129 23 C -0.132 4.132 24 C -0.139 4.139 25 C -0.131 4.131 26 C -0.125 4.125 27 C -0.145 4.145 28 C -0.189 4.189 29 C -0.027 4.027 30 H 0.407 0.593 31 H 0.097 0.903 32 H -0.279 1.279 33 H -0.273 1.273 34 H 0.162 0.838 35 H 0.144 0.856 36 H 0.142 0.858 37 H 0.423 0.577 38 H 0.095 0.905 39 H 0.093 0.907 40 H 0.128 0.872 41 H 0.130 0.870 42 H 0.131 0.869 43 H 0.134 0.866 44 H 0.138 0.862 45 H 0.069 0.931 46 H 0.091 0.909 47 H 0.203 0.797 48 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.242 14.861 -2.313 15.627 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.378 6.378 2 C -0.196 4.196 3 Si 0.681 3.319 4 C -0.119 4.119 5 C -0.017 4.017 6 C -0.186 4.186 7 N 0.546 4.454 8 O -0.400 6.400 9 O -0.386 6.386 10 C 0.144 3.856 11 O -0.197 6.197 12 C -0.054 4.054 13 C 0.298 3.702 14 O -0.439 6.439 15 N -0.344 5.344 16 C 0.011 3.989 17 H 0.099 0.901 18 C -0.160 4.160 19 C -0.081 4.081 20 H 0.135 0.865 21 C -0.080 4.080 22 C -0.147 4.147 23 C -0.150 4.150 24 C -0.157 4.157 25 C -0.149 4.149 26 C -0.143 4.143 27 C -0.183 4.183 28 C -0.208 4.208 29 C -0.044 4.044 30 H 0.259 0.741 31 H 0.115 0.885 32 H -0.206 1.206 33 H -0.199 1.199 34 H 0.180 0.820 35 H 0.162 0.838 36 H 0.159 0.841 37 H 0.261 0.739 38 H 0.114 0.886 39 H 0.112 0.888 40 H 0.146 0.854 41 H 0.148 0.852 42 H 0.149 0.851 43 H 0.152 0.848 44 H 0.156 0.844 45 H 0.087 0.913 46 H 0.109 0.891 47 H 0.220 0.780 48 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges 4.701 14.726 -1.365 15.518 hybrid contribution -0.141 -1.210 0.545 1.335 sum 4.560 13.516 -0.820 14.288 Atomic orbital electron populations 1.86449 1.17082 1.82696 1.51591 1.25017 0.86230 1.12367 0.95995 0.93434 0.78064 0.74375 0.86017 1.19678 1.01547 0.92042 0.98594 1.20906 0.92668 0.94742 0.93380 1.20871 1.15290 0.80193 1.02263 1.43785 0.98061 1.03955 0.99606 1.94493 1.39720 1.67651 1.38118 1.94687 1.53878 1.70625 1.19430 1.18859 0.89844 0.91778 0.85076 1.86473 1.67393 1.37680 1.28185 1.23127 1.00084 0.93851 0.88293 1.20422 0.78101 0.87997 0.83723 1.90850 1.55001 1.18761 1.79281 1.45277 1.55677 1.14109 1.19339 1.21838 0.96438 0.95371 0.85301 0.90079 1.23349 0.95439 1.00185 0.97045 1.21603 0.96197 0.99751 0.90537 0.86482 1.19882 0.99158 0.93142 0.95790 1.21228 1.00353 0.98514 0.94633 1.21415 0.99535 0.98747 0.95334 1.21444 1.00494 0.92916 1.00799 1.21457 0.99609 0.98804 0.94994 1.21339 0.99756 0.98209 0.95026 1.23559 0.98388 0.99649 0.96744 1.21683 1.06504 0.90434 1.02160 1.21524 0.91256 1.00659 0.90969 0.74087 0.88469 1.20575 1.19926 0.82040 0.83845 0.84100 0.73893 0.88622 0.88806 0.85388 0.85208 0.85139 0.84762 0.84378 0.91272 0.89052 0.78022 0.82017 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 2.42 12.81 -148.98 -1.91 0.51 16 2 C -0.09 0.54 2.79 71.23 0.20 0.73 16 3 Si 0.78 -7.69 29.84 68.60 2.05 -5.64 16 4 C -0.12 0.10 5.39 -19.85 -0.11 -0.01 16 5 C 0.00 0.01 9.18 22.25 0.20 0.21 16 6 C -0.10 -0.96 6.87 36.48 0.25 -0.70 16 7 N 0.03 0.61 4.45 -46.24 -0.21 0.40 16 8 O -0.19 -3.57 18.45 18.89 0.35 -3.22 16 9 O -0.17 -3.92 17.24 25.61 0.44 -3.48 16 10 C 0.19 0.75 6.67 22.51 0.15 0.90 16 11 O -0.29 -1.91 7.68 -63.34 -0.49 -2.40 16 12 C 0.02 -0.12 5.22 71.24 0.37 0.25 16 13 C 0.51 1.13 7.91 87.66 0.69 1.83 16 14 O -0.56 -8.93 16.10 16.02 0.26 -8.67 16 15 N -0.69 3.68 5.26 -440.04 -2.32 1.37 16 16 C 0.12 -0.23 4.32 45.52 0.20 -0.03 16 17 H 0.08 0.34 7.46 -2.39 -0.02 0.32 16 18 C -0.12 0.72 7.29 31.12 0.23 0.94 16 19 C -0.06 0.34 3.85 -11.01 -0.04 0.30 16 20 H 0.12 -1.11 8.09 -2.39 -0.02 -1.13 16 21 C -0.08 0.09 5.29 -19.87 -0.11 -0.02 16 22 C -0.13 -0.08 8.63 22.27 0.19 0.12 16 23 C -0.13 -0.18 10.05 22.27 0.22 0.05 16 24 C -0.14 -0.14 10.05 22.27 0.22 0.08 16 25 C -0.13 0.00 10.05 22.27 0.22 0.22 16 26 C -0.13 0.15 9.71 22.27 0.22 0.36 16 27 C -0.14 0.32 7.25 31.12 0.23 0.54 16 28 C -0.19 1.04 9.04 22.37 0.20 1.24 16 29 C -0.03 0.12 8.66 22.25 0.19 0.31 16 30 H 0.41 -5.89 8.74 -74.05 -0.65 -6.54 16 31 H 0.10 -0.91 7.96 -2.38 -0.02 -0.93 16 32 H -0.28 1.26 7.05 99.48 0.70 1.96 16 33 H -0.27 1.65 7.11 99.48 0.71 2.36 16 34 H 0.16 0.69 7.61 -2.91 -0.02 0.66 16 35 H 0.14 -2.00 7.66 -2.39 -0.02 -2.02 16 36 H 0.14 -1.90 7.66 -2.39 -0.02 -1.92 16 37 H 0.42 -5.88 8.70 -92.71 -0.81 -6.69 16 38 H 0.10 -0.42 7.73 -2.39 -0.02 -0.44 16 39 H 0.09 -0.82 8.14 -2.39 -0.02 -0.84 16 40 H 0.13 -0.18 6.65 -2.91 -0.02 -0.20 16 41 H 0.13 -0.17 8.06 -2.91 -0.02 -0.20 16 42 H 0.13 -0.25 8.06 -2.91 -0.02 -0.27 16 43 H 0.13 -0.46 8.06 -2.91 -0.02 -0.48 16 44 H 0.14 -0.77 8.06 -2.91 -0.02 -0.79 16 45 H 0.07 -0.06 8.14 -2.38 -0.02 -0.08 16 46 H 0.09 -0.09 6.31 -2.39 -0.02 -0.10 16 47 H 0.20 -3.15 6.30 -2.91 -0.02 -3.17 16 48 H 0.16 -1.44 4.86 -2.91 -0.01 -1.45 16 Total: 0.00 -37.29 408.46 1.54 -35.75 By element: Atomic # 1 Polarization: -21.57 SS G_CDS: -0.38 Total: -21.95 kcal Atomic # 6 Polarization: 3.59 SS G_CDS: 3.74 Total: 7.33 kcal Atomic # 7 Polarization: 4.29 SS G_CDS: -2.52 Total: 1.77 kcal Atomic # 8 Polarization: -15.91 SS G_CDS: -1.35 Total: -17.26 kcal Atomic # 14 Polarization: -7.69 SS G_CDS: 2.05 Total: -5.64 kcal Total: -37.29 1.54 -35.75 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705150_4549638.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 27.519 kcal (2) G-P(sol) polarization free energy of solvation -37.287 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -9.768 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.539 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.748 kcal (6) G-S(sol) free energy of system = (1) + (5) -8.229 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds