Wall clock time and date at job start Tue Mar 9 2021 12:52:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 O 1.42895 * 109.47191 * 2 1 4 4 C 1.35895 * 117.00483 * 84.94916 * 3 2 1 5 5 C 1.38730 * 120.05912 * 174.27236 * 4 3 2 6 6 C 1.38155 * 119.94286 * 179.70159 * 5 4 3 7 7 C 1.38264 * 120.05246 * 0.59751 * 6 5 4 8 8 C 1.50708 * 119.94094 * 179.70198 * 7 6 5 9 9 O 1.42898 * 109.46711 * 119.97745 * 8 7 6 10 10 Si 1.86302 * 109.46988 * 359.97438 * 8 7 6 11 11 C 1.38267 * 120.11561 * 359.67881 * 7 6 5 12 12 C 1.38145 * 120.05297 * 0.02562 * 11 7 6 13 13 C 1.50696 * 109.47155 * 239.99748 * 2 1 3 14 14 O 1.21275 * 120.00116 * 114.99968 * 13 2 1 15 15 N 1.34781 * 119.99746 * 295.00288 * 13 2 1 16 16 C 1.46509 * 119.99424 * 179.97438 * 15 13 2 17 17 H 1.08997 * 112.84959 * 23.80720 * 16 15 13 18 18 C 1.53783 * 113.60892 * 155.00181 * 16 15 13 19 19 C 1.53780 * 87.08445 * 89.11484 * 18 16 15 20 20 H 1.09005 * 113.61070 * 270.79840 * 19 18 16 21 21 C 1.50700 * 113.61421 * 139.97910 * 19 18 16 22 22 C 1.38185 * 119.99050 * 120.00226 * 21 19 18 23 23 C 1.38379 * 119.98251 * 180.02562 * 22 21 19 24 24 Cl 1.73607 * 120.00994 * 179.97438 * 23 22 21 25 25 C 1.38328 * 119.97745 * 0.02562 * 23 22 21 26 26 C 1.38233 * 119.98239 * 0.02562 * 25 23 22 27 27 C 1.38222 * 120.01632 * 359.96548 * 26 25 23 28 28 C 1.53780 * 113.61117 * 252.49341 * 16 15 13 29 29 H 1.08997 * 109.47512 * 180.02562 * 1 2 3 30 30 H 1.09005 * 109.47256 * 300.00277 * 1 2 3 31 31 H 1.08999 * 109.47099 * 59.99797 * 1 2 3 32 32 H 1.09003 * 109.46930 * 119.99718 * 2 1 3 33 33 H 1.07994 * 120.02926 * 0.02562 * 5 4 3 34 34 H 1.08000 * 119.96685 * 180.27769 * 6 5 4 35 35 H 1.08993 * 109.46889 * 239.97742 * 8 7 6 36 36 H 0.96696 * 114.00772 * 299.99551 * 9 8 7 37 37 H 1.48500 * 110.00202 * 58.68028 * 10 8 7 38 38 H 1.48496 * 109.99918 * 180.02562 * 10 8 7 39 39 H 1.08001 * 119.97052 * 179.97438 * 11 7 6 40 40 H 1.08001 * 120.02548 * 179.97438 * 12 11 7 41 41 H 0.96990 * 120.00478 * 359.97438 * 15 13 2 42 42 H 1.08997 * 113.61341 * 334.56058 * 18 16 15 43 43 H 1.09004 * 113.61103 * 203.66756 * 18 16 15 44 44 H 1.07999 * 120.01425 * 359.74508 * 22 21 19 45 45 H 1.07997 * 120.00502 * 179.97438 * 25 23 22 46 46 H 1.08006 * 119.99033 * 179.97438 * 26 25 23 47 47 H 1.07995 * 119.98527 * 180.02562 * 27 26 25 48 48 H 1.09001 * 113.60921 * 156.33999 * 28 16 15 49 49 H 1.08995 * 113.61439 * 25.43889 * 28 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3472 0.0000 4 6 2.1115 1.9645 1.2061 5 6 2.6777 3.2280 1.2930 6 6 2.7778 3.8560 2.5195 7 6 2.3256 3.2210 3.6614 8 6 2.4422 3.9055 4.9990 9 8 1.1408 4.0660 5.5669 10 14 3.2322 5.5777 4.7740 11 6 1.7661 1.9593 3.5783 12 6 1.6582 1.3297 2.3534 13 6 2.0323 -0.7104 -1.2304 14 8 2.6529 -0.0980 -2.0733 15 7 1.7918 -2.0265 -1.3940 16 6 2.2797 -2.7170 -2.5905 17 1 3.1332 -2.2176 -3.0490 18 6 2.4851 -4.2277 -2.3891 19 6 1.0195 -4.4047 -2.8196 20 1 0.3121 -4.3538 -1.9918 21 6 0.7921 -5.5983 -3.7111 22 6 -0.0689 -6.6034 -3.3135 23 6 -0.2771 -7.6995 -4.1320 24 17 -1.3581 -8.9629 -3.6330 25 6 0.3773 -7.7888 -5.3475 26 6 1.2391 -6.7832 -5.7435 27 6 1.4466 -5.6884 -4.9257 28 6 1.1675 -3.0810 -3.5882 29 1 -0.3634 -1.0276 0.0005 30 1 -0.3634 0.5139 0.8900 31 1 -0.3633 0.5139 -0.8900 32 1 1.8933 -0.5138 0.8900 33 1 3.0351 3.7226 0.4019 34 1 3.2145 4.8415 2.5870 35 1 3.0570 3.2998 5.6647 36 1 0.5385 4.5958 5.0269 37 1 2.4203 6.4020 3.8431 38 1 3.3535 6.2627 6.0859 39 1 1.4140 1.4653 4.4718 40 1 1.2215 0.3440 2.2890 41 1 1.2958 -2.5164 -0.7197 42 1 2.6728 -4.5084 -1.3527 43 1 3.2006 -4.6675 -3.0840 44 1 -0.5757 -6.5356 -2.3623 45 1 0.2154 -8.6443 -5.9864 46 1 1.7504 -6.8529 -6.6923 47 1 2.1197 -4.9029 -5.2357 48 1 1.5227 -3.2073 -4.6109 49 1 0.2915 -2.4361 -3.5199 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705206_10157680.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:21 Heat of formation + Delta-G solvation = -22.172197 kcal Electronic energy + Delta-G solvation = -31777.694765 eV Core-core repulsion = 27277.616710 eV Total energy + Delta-G solvation = -4500.078055 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 388.127 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -41.95260 -41.33419 -40.40687 -39.33264 -38.68306 -37.37639 -37.25268 -34.90703 -33.17559 -32.09941 -31.97948 -31.54584 -31.13808 -26.85196 -26.70087 -26.41949 -25.28489 -24.16050 -23.69718 -22.79944 -22.39048 -21.50783 -20.23281 -19.47194 -18.70442 -18.29083 -18.09955 -17.28719 -16.84754 -16.77914 -16.45499 -16.37506 -16.31087 -16.15898 -15.72834 -15.65886 -15.34443 -15.26704 -14.80216 -14.71708 -14.64688 -14.35028 -14.30110 -14.26557 -13.76748 -13.48953 -13.45506 -13.36843 -13.34018 -12.92708 -12.88244 -12.56731 -12.44201 -12.26720 -12.26564 -12.20204 -12.00258 -11.71848 -11.64778 -11.59944 -11.24624 -10.94772 -10.59562 -10.18257 -10.03645 -9.85264 -9.60344 -9.22350 -4.91337 0.16319 0.24714 0.28556 0.32964 1.15167 1.33331 1.38286 1.46946 1.60544 1.95984 2.47420 2.60224 2.65015 3.41946 3.44373 3.44675 3.62370 3.65073 3.69285 3.72739 3.82458 3.86402 3.88683 3.92889 3.96715 4.11833 4.14249 4.27369 4.29495 4.35778 4.44048 4.55065 4.58044 4.61469 4.65004 4.69174 4.70394 4.77826 4.84044 4.94585 4.98751 4.99852 5.02430 5.07896 5.12849 5.19176 5.26448 5.29317 5.38267 5.45781 5.48329 5.62665 5.68549 5.84800 6.25519 6.43790 6.50219 7.08231 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.172 4.172 2 C 0.065 3.935 3 O -0.312 6.312 4 C 0.120 3.880 5 C -0.160 4.160 6 C -0.077 4.077 7 C -0.158 4.158 8 C -0.072 4.072 9 O -0.548 6.548 10 Si 0.755 3.245 11 C -0.056 4.056 12 C -0.207 4.207 13 C 0.520 3.480 14 O -0.567 6.567 15 N -0.691 5.691 16 C 0.115 3.885 17 H 0.086 0.914 18 C -0.123 4.123 19 C -0.066 4.066 20 H 0.116 0.884 21 C -0.060 4.060 22 C -0.116 4.116 23 C -0.048 4.048 24 Cl -0.082 7.082 25 C -0.128 4.128 26 C -0.108 4.108 27 C -0.117 4.117 28 C -0.142 4.142 29 H 0.110 0.890 30 H 0.084 0.916 31 H 0.058 0.942 32 H 0.127 0.873 33 H 0.135 0.865 34 H 0.147 0.853 35 H 0.127 0.873 36 H 0.385 0.615 37 H -0.286 1.286 38 H -0.303 1.303 39 H 0.140 0.860 40 H 0.155 0.845 41 H 0.420 0.580 42 H 0.091 0.909 43 H 0.103 0.897 44 H 0.141 0.859 45 H 0.137 0.863 46 H 0.149 0.851 47 H 0.145 0.855 48 H 0.099 0.901 49 H 0.070 0.930 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.482 -3.415 1.227 3.660 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.230 4.230 2 C 0.005 3.995 3 O -0.225 6.225 4 C 0.075 3.925 5 C -0.178 4.178 6 C -0.094 4.094 7 C -0.159 4.159 8 C -0.181 4.181 9 O -0.356 6.356 10 Si 0.662 3.338 11 C -0.074 4.074 12 C -0.226 4.226 13 C 0.306 3.694 14 O -0.444 6.444 15 N -0.344 5.344 16 C 0.009 3.991 17 H 0.104 0.896 18 C -0.161 4.161 19 C -0.084 4.084 20 H 0.134 0.866 21 C -0.061 4.061 22 C -0.134 4.134 23 C -0.075 4.075 24 Cl -0.053 7.053 25 C -0.147 4.147 26 C -0.126 4.126 27 C -0.135 4.135 28 C -0.180 4.180 29 H 0.128 0.872 30 H 0.103 0.897 31 H 0.078 0.922 32 H 0.145 0.855 33 H 0.152 0.848 34 H 0.165 0.835 35 H 0.145 0.855 36 H 0.235 0.765 37 H -0.212 1.212 38 H -0.232 1.232 39 H 0.158 0.842 40 H 0.172 0.828 41 H 0.258 0.742 42 H 0.110 0.890 43 H 0.121 0.879 44 H 0.159 0.841 45 H 0.155 0.845 46 H 0.167 0.833 47 H 0.163 0.837 48 H 0.117 0.883 49 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges 1.044 -2.533 1.028 2.926 hybrid contribution -1.709 -0.424 0.088 1.763 sum -0.664 -2.957 1.116 3.230 Atomic orbital electron populations 1.22364 0.90658 1.05700 1.04261 1.22404 0.97037 0.82208 0.97827 1.86187 1.81446 1.26992 1.27923 1.19267 0.95849 0.93153 0.84248 1.20584 1.03904 0.94125 0.99219 1.20972 0.97719 0.99707 0.91007 1.20272 1.03707 0.96611 0.95318 1.25052 0.88756 1.10344 0.93989 1.86559 1.23256 1.75129 1.50673 0.94166 0.88517 0.73594 0.77572 1.20990 0.95301 0.93632 0.97501 1.21525 1.06539 1.02639 0.91859 1.20496 0.78890 0.82749 0.87299 1.90753 1.41406 1.66855 1.45413 1.45388 1.57345 1.07905 1.23799 1.21878 0.97556 0.93388 0.86244 0.89606 1.23388 0.95972 0.92768 1.03950 1.21635 0.98319 0.90795 0.97624 0.86638 1.19793 0.95590 0.95325 0.95344 1.21134 0.99496 0.92589 1.00228 1.21144 0.97244 0.92091 0.96987 1.98385 1.63701 1.51899 1.91314 1.21296 0.97403 1.00772 0.95191 1.21408 0.97328 0.93101 1.00768 1.21406 0.99704 0.98554 0.93815 1.23570 0.99158 0.95984 0.99306 0.87193 0.89740 0.92240 0.85535 0.84753 0.83549 0.85543 0.76538 1.21234 1.23160 0.84235 0.82780 0.74231 0.89049 0.87894 0.84073 0.84502 0.83280 0.83709 0.88271 0.91140 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 1.13 9.13 71.98 0.66 1.78 16 2 C 0.06 -0.13 2.64 29.85 0.08 -0.06 16 3 O -0.31 -1.79 9.34 -73.38 -0.69 -2.48 16 4 C 0.12 0.37 6.60 22.51 0.15 0.52 16 5 C -0.16 -0.47 9.99 22.37 0.22 -0.24 16 6 C -0.08 0.01 8.66 22.26 0.19 0.20 16 7 C -0.16 0.08 5.39 -19.85 -0.11 -0.02 16 8 C -0.07 0.10 2.82 71.24 0.20 0.30 16 9 O -0.55 -0.84 12.77 -148.98 -1.90 -2.75 16 10 Si 0.76 -1.25 29.78 68.60 2.04 0.79 16 11 C -0.06 0.06 9.60 22.25 0.21 0.28 16 12 C -0.21 0.31 8.24 22.37 0.18 0.49 16 13 C 0.52 1.11 7.18 87.66 0.63 1.74 16 14 O -0.57 -7.57 16.11 15.97 0.26 -7.31 16 15 N -0.69 3.89 5.22 -440.03 -2.30 1.59 16 16 C 0.11 -0.50 4.33 45.52 0.20 -0.30 16 17 H 0.09 0.07 7.46 -2.39 -0.02 0.06 16 18 C -0.12 1.02 7.29 31.12 0.23 1.25 16 19 C -0.07 0.51 3.86 -11.01 -0.04 0.47 16 20 H 0.12 -1.24 8.09 -2.38 -0.02 -1.26 16 21 C -0.06 0.23 5.29 -19.87 -0.11 0.13 16 22 C -0.12 0.17 9.49 22.29 0.21 0.39 16 23 C -0.05 -0.06 6.32 22.32 0.14 0.08 16 24 Cl -0.08 -0.22 28.96 -2.72 -0.08 -0.30 16 25 C -0.13 0.03 9.83 22.29 0.22 0.24 16 26 C -0.11 0.30 10.05 22.26 0.22 0.53 16 27 C -0.12 0.46 8.61 22.27 0.19 0.65 16 28 C -0.14 0.77 7.25 31.12 0.23 0.99 16 29 H 0.11 -1.42 7.93 -2.39 -0.02 -1.44 16 30 H 0.08 -0.60 6.91 -2.38 -0.02 -0.62 16 31 H 0.06 -0.13 8.14 -2.39 -0.02 -0.15 16 32 H 0.13 -1.01 6.31 -2.39 -0.02 -1.02 16 33 H 0.13 0.34 8.06 -2.91 -0.02 0.31 16 34 H 0.15 -0.56 4.87 -2.91 -0.01 -0.57 16 35 H 0.13 -0.41 7.96 -2.39 -0.02 -0.43 16 36 H 0.39 -1.38 8.70 -74.06 -0.64 -2.02 16 37 H -0.29 -0.73 7.11 99.48 0.71 -0.03 16 38 H -0.30 -1.86 7.11 99.48 0.71 -1.15 16 39 H 0.14 -0.46 8.06 -2.91 -0.02 -0.49 16 40 H 0.15 -1.11 5.43 -2.91 -0.02 -1.12 16 41 H 0.42 -5.38 8.48 -92.72 -0.79 -6.16 16 42 H 0.09 -0.93 8.14 -2.39 -0.02 -0.95 16 43 H 0.10 -0.84 7.72 -2.39 -0.02 -0.86 16 44 H 0.14 -0.59 8.05 -2.91 -0.02 -0.62 16 45 H 0.14 -0.26 8.06 -2.91 -0.02 -0.29 16 46 H 0.15 -1.00 8.06 -2.91 -0.02 -1.03 16 47 H 0.15 -1.07 6.66 -2.91 -0.02 -1.08 16 48 H 0.10 -0.56 6.31 -2.39 -0.02 -0.58 16 49 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 Total: 0.00 -23.67 416.51 0.86 -22.80 By element: Atomic # 1 Polarization: -21.39 SS G_CDS: -0.38 Total: -21.77 kcal Atomic # 6 Polarization: 5.51 SS G_CDS: 3.91 Total: 9.42 kcal Atomic # 7 Polarization: 3.89 SS G_CDS: -2.30 Total: 1.59 kcal Atomic # 8 Polarization: -10.21 SS G_CDS: -2.33 Total: -12.54 kcal Atomic # 14 Polarization: -1.25 SS G_CDS: 2.04 Total: 0.79 kcal Atomic # 17 Polarization: -0.22 SS G_CDS: -0.08 Total: -0.30 kcal Total: -23.67 0.86 -22.80 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705206_10157680.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 0.632 kcal (2) G-P(sol) polarization free energy of solvation -23.668 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -23.037 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.864 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.804 kcal (6) G-S(sol) free energy of system = (1) + (5) -22.172 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.29 seconds