Wall clock time and date at job start Tue Mar 9 2021 12:52:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46496 * 1 3 3 C 1.37655 * 125.67871 * 2 1 4 4 C 1.46679 * 126.23129 * 359.97438 * 3 2 1 5 5 O 1.21698 * 119.99911 * 357.91863 * 4 3 2 6 6 N 1.34776 * 120.00263 * 177.92157 * 4 3 2 7 7 C 1.46496 * 120.00242 * 185.38925 * 6 4 3 8 8 H 1.08998 * 112.84885 * 23.80884 * 7 6 4 9 9 C 1.53786 * 113.61447 * 154.99866 * 7 6 4 10 10 C 1.53782 * 87.08018 * 89.12012 * 9 7 6 11 11 H 1.09006 * 113.61268 * 270.89001 * 10 9 7 12 12 C 1.50697 * 113.61765 * 140.06592 * 10 9 7 13 13 C 1.38188 * 119.99573 * 119.99604 * 12 10 9 14 14 C 1.38369 * 119.99002 * 179.97438 * 13 12 10 15 15 Cl 1.73599 * 120.01658 * 180.02562 * 14 13 12 16 16 C 1.38335 * 119.97362 * 0.02562 * 14 13 12 17 17 C 1.38239 * 119.98228 * 0.02562 * 16 14 13 18 18 C 1.38220 * 120.01588 * 359.74266 * 17 16 14 19 19 C 1.53779 * 113.62049 * 252.49855 * 7 6 4 20 20 C 1.37866 * 107.53748 * 180.27748 * 3 2 1 21 21 C 1.39836 * 107.08263 * 359.74299 * 20 3 2 22 22 C 1.35455 * 107.86645 * 359.97438 * 21 20 3 23 23 C 1.50695 * 125.56498 * 179.97438 * 22 21 20 24 24 O 1.42903 * 109.47329 * 210.02440 * 23 22 21 25 25 Si 1.86302 * 109.47476 * 330.02437 * 23 22 21 26 26 H 1.09004 * 109.47251 * 263.59800 * 1 2 3 27 27 H 1.09001 * 109.47146 * 23.60242 * 1 2 3 28 28 H 1.09010 * 109.47081 * 143.60114 * 1 2 3 29 29 H 0.97001 * 119.99769 * 5.39829 * 6 4 3 30 30 H 1.08999 * 113.61781 * 203.66619 * 9 7 6 31 31 H 1.08994 * 113.61122 * 334.48687 * 9 7 6 32 32 H 1.08005 * 120.00616 * 359.96616 * 13 12 10 33 33 H 1.08001 * 120.00763 * 179.97438 * 16 14 13 34 34 H 1.08004 * 119.99152 * 180.02562 * 17 16 14 35 35 H 1.07993 * 119.98901 * 180.28245 * 18 17 16 36 36 H 1.09005 * 113.61230 * 25.43236 * 19 7 6 37 37 H 1.08992 * 113.62012 * 156.33356 * 19 7 6 38 38 H 1.07995 * 126.45948 * 179.72369 * 20 3 2 39 39 H 1.08007 * 126.07052 * 179.97438 * 21 20 3 40 40 H 1.09004 * 109.47356 * 90.02600 * 23 22 21 41 41 H 0.96708 * 113.99847 * 60.00005 * 24 23 22 42 42 H 1.48510 * 109.99633 * 58.67732 * 25 23 22 43 43 H 1.48499 * 110.00474 * 179.97438 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2678 1.1182 0.0000 4 6 1.8124 2.5125 -0.0005 5 8 0.6223 2.7638 -0.0393 6 7 2.7118 3.5153 0.0419 7 6 2.2570 4.9028 0.1605 8 1 1.2669 4.9867 0.6085 9 6 3.2997 5.8412 0.7906 10 6 3.8292 6.0805 -0.6332 11 1 4.5974 5.3701 -0.9386 12 6 4.2164 7.5121 -0.9006 13 6 5.5153 7.8215 -1.2567 14 6 5.8706 9.1359 -1.5027 15 17 7.5020 9.5253 -1.9507 16 6 4.9254 10.1398 -1.3915 17 6 3.6266 9.8292 -1.0342 18 6 3.2711 8.5154 -0.7933 19 6 2.4209 5.7177 -1.1332 20 6 3.5779 0.6889 -0.0064 21 6 3.5521 -0.7092 -0.0042 22 6 2.2555 -1.1009 0.0038 23 6 1.7709 -2.5278 0.0081 24 8 0.5092 -2.6045 -0.6585 25 14 3.0067 -3.6061 -0.8757 26 1 -0.3634 -0.1146 1.0213 27 1 -0.3633 0.9417 -0.4115 28 1 -0.3634 -0.8272 -0.6099 29 1 3.6604 3.3183 -0.0063 30 1 2.8665 6.7294 1.2504 31 1 4.0094 5.3308 1.4417 32 1 6.2531 7.0374 -1.3428 33 1 5.2022 11.1660 -1.5830 34 1 2.8883 10.6128 -0.9478 35 1 2.2552 8.2727 -0.5186 36 1 2.4220 5.1074 -2.0365 37 1 1.7474 6.5721 -1.1994 38 1 4.4582 1.3145 -0.0123 39 1 4.4132 -1.3611 -0.0083 40 1 1.6597 -2.8707 1.0368 41 1 0.5333 -2.3141 -1.5806 42 1 4.3313 -3.5103 -0.2110 43 1 2.5408 -5.0160 -0.8778 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705206_10803936.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:31 Heat of formation + Delta-G solvation = 37.509620 kcal Electronic energy + Delta-G solvation = -26952.888577 eV Core-core repulsion = 22992.418561 eV Total energy + Delta-G solvation = -3960.470016 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 347.108 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -42.63586 -41.46149 -40.15570 -38.82285 -37.78753 -37.35652 -34.89212 -33.67125 -32.19303 -31.63492 -31.00695 -27.57531 -27.17859 -26.69326 -25.85643 -23.79246 -23.36165 -22.58428 -21.58962 -20.60209 -20.08562 -18.87153 -18.30930 -17.95463 -17.19256 -16.90939 -16.60858 -16.39123 -16.13736 -16.03542 -15.55928 -15.48982 -15.19824 -14.88451 -14.81793 -14.64008 -14.53098 -14.39666 -14.32923 -13.71111 -13.59086 -13.45394 -13.19665 -13.02592 -12.88578 -12.55867 -12.43024 -12.24877 -12.17838 -12.02156 -11.71184 -11.63818 -11.24096 -11.16135 -10.65862 -10.18410 -9.84509 -9.76807 -9.59690 -9.12067 -4.90838 0.17100 0.29090 0.34628 1.15926 1.17789 1.48944 1.72348 1.75291 2.03115 2.29500 2.33595 2.61122 3.28119 3.44840 3.55224 3.63205 3.67083 3.74267 3.89172 3.97343 3.99366 4.12713 4.14966 4.30280 4.31371 4.33256 4.40543 4.44863 4.54661 4.62549 4.69529 4.76608 4.78011 4.85524 4.95514 4.99847 5.03548 5.03721 5.11737 5.16618 5.27294 5.39263 5.47597 5.63240 5.72023 5.85600 5.96816 6.11783 6.45801 6.56088 7.11297 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.055 3.945 2 N -0.401 5.401 3 C -0.080 4.080 4 C 0.590 3.410 5 O -0.583 6.583 6 N -0.688 5.688 7 C 0.118 3.882 8 H 0.088 0.912 9 C -0.124 4.124 10 C -0.066 4.066 11 H 0.112 0.888 12 C -0.060 4.060 13 C -0.116 4.116 14 C -0.048 4.048 15 Cl -0.081 7.081 16 C -0.128 4.128 17 C -0.108 4.108 18 C -0.116 4.116 19 C -0.140 4.140 20 C -0.124 4.124 21 C -0.214 4.214 22 C 0.014 3.986 23 C -0.058 4.058 24 O -0.553 6.553 25 Si 0.812 3.188 26 H 0.064 0.936 27 H 0.089 0.911 28 H 0.119 0.881 29 H 0.417 0.583 30 H 0.105 0.895 31 H 0.088 0.912 32 H 0.140 0.860 33 H 0.138 0.862 34 H 0.151 0.849 35 H 0.146 0.854 36 H 0.068 0.932 37 H 0.101 0.899 38 H 0.173 0.827 39 H 0.162 0.838 40 H 0.112 0.888 41 H 0.396 0.604 42 H -0.274 1.274 43 H -0.295 1.295 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.875 -0.294 -1.621 2.496 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 N -0.074 5.074 3 C -0.194 4.194 4 C 0.379 3.621 5 O -0.465 6.465 6 N -0.339 5.339 7 C 0.013 3.987 8 H 0.106 0.894 9 C -0.162 4.162 10 C -0.084 4.084 11 H 0.130 0.870 12 C -0.060 4.060 13 C -0.135 4.135 14 C -0.075 4.075 15 Cl -0.053 7.053 16 C -0.146 4.146 17 C -0.126 4.126 18 C -0.134 4.134 19 C -0.178 4.178 20 C -0.150 4.150 21 C -0.237 4.237 22 C -0.104 4.104 23 C -0.166 4.166 24 O -0.361 6.361 25 Si 0.714 3.286 26 H 0.082 0.918 27 H 0.107 0.893 28 H 0.137 0.863 29 H 0.254 0.746 30 H 0.123 0.877 31 H 0.106 0.894 32 H 0.158 0.842 33 H 0.156 0.844 34 H 0.168 0.832 35 H 0.164 0.836 36 H 0.086 0.914 37 H 0.120 0.880 38 H 0.191 0.809 39 H 0.179 0.821 40 H 0.130 0.870 41 H 0.246 0.754 42 H -0.200 1.200 43 H -0.222 1.222 Dipole moment (debyes) X Y Z Total from point charges 1.126 -0.910 -1.026 1.775 hybrid contribution 0.232 0.439 0.610 0.786 sum 1.358 -0.471 -0.416 1.497 Atomic orbital electron populations 1.22575 0.75643 1.06243 1.04036 1.43912 1.07189 1.04381 1.51927 1.20168 0.91373 0.87307 1.20503 1.17171 0.85333 0.84230 0.75333 1.90769 1.17720 1.85330 1.52725 1.45183 1.10101 1.04842 1.73759 1.21866 0.99213 0.79713 0.97896 0.89366 1.23396 0.97569 0.99416 0.95785 1.21613 0.97504 0.92169 0.97130 0.87005 1.19784 0.92330 0.95936 0.97990 1.21131 0.97274 0.94690 1.00404 1.21139 0.86270 0.95507 1.04559 1.98383 1.21064 1.94529 1.91285 1.21303 0.93196 0.99357 1.00765 1.21414 0.95603 0.97575 0.97972 1.21406 1.00498 0.92294 0.99230 1.23558 0.96404 1.00226 0.97638 1.21652 0.94486 0.95504 1.03363 1.20916 0.95326 0.95821 1.11669 1.21393 0.91188 0.89480 1.08377 1.25214 0.94464 0.94198 1.02762 1.86459 1.30074 1.88896 1.30710 0.92955 0.73537 0.74040 0.88088 0.91771 0.89259 0.86310 0.74559 0.87671 0.89356 0.84185 0.84432 0.83172 0.83630 0.91352 0.88021 0.80917 0.82095 0.87024 0.75370 1.19955 1.22241 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.18 10.28 127.77 1.31 1.49 16 2 N -0.40 -1.56 3.16 -519.70 -1.64 -3.21 16 3 C -0.08 -0.30 6.89 40.35 0.28 -0.02 16 4 C 0.59 3.09 7.78 86.45 0.67 3.76 16 5 O -0.58 -7.18 14.18 -4.34 -0.06 -7.24 16 6 N -0.69 1.35 5.24 -444.00 -2.33 -0.98 16 7 C 0.12 -0.31 4.29 45.52 0.20 -0.12 16 8 H 0.09 0.14 7.53 -2.39 -0.02 0.12 16 9 C -0.12 0.81 7.29 31.12 0.23 1.04 16 10 C -0.07 0.40 3.85 -11.01 -0.04 0.35 16 11 H 0.11 -0.91 8.09 -2.38 -0.02 -0.93 16 12 C -0.06 0.16 5.29 -19.87 -0.11 0.06 16 13 C -0.12 0.05 9.49 22.29 0.21 0.26 16 14 C -0.05 -0.09 6.32 22.32 0.14 0.05 16 15 Cl -0.08 -0.27 28.96 -2.72 -0.08 -0.35 16 16 C -0.13 -0.04 9.83 22.29 0.22 0.18 16 17 C -0.11 0.25 10.05 22.27 0.22 0.48 16 18 C -0.12 0.38 8.62 22.27 0.19 0.57 16 19 C -0.14 0.56 7.25 31.12 0.23 0.78 16 20 C -0.12 0.12 10.36 22.57 0.23 0.36 16 21 C -0.21 0.14 9.37 22.01 0.21 0.34 16 22 C 0.01 0.01 6.15 41.34 0.25 0.27 16 23 C -0.06 0.11 2.99 71.23 0.21 0.32 16 24 O -0.55 1.24 10.13 -148.98 -1.51 -0.27 16 25 Si 0.81 -3.79 31.29 68.60 2.15 -1.64 16 26 H 0.06 0.27 8.14 -2.39 -0.02 0.26 16 27 H 0.09 0.58 5.93 -2.39 -0.01 0.57 16 28 H 0.12 -0.12 5.27 -2.38 -0.01 -0.14 16 29 H 0.42 -3.12 7.60 -92.71 -0.70 -3.83 16 30 H 0.10 -0.74 7.73 -2.39 -0.02 -0.76 16 31 H 0.09 -0.68 8.14 -2.39 -0.02 -0.70 16 32 H 0.14 -0.39 8.05 -2.91 -0.02 -0.42 16 33 H 0.14 -0.22 8.06 -2.91 -0.02 -0.24 16 34 H 0.15 -0.98 8.06 -2.91 -0.02 -1.00 16 35 H 0.15 -1.00 6.65 -2.91 -0.02 -1.02 16 36 H 0.07 -0.11 8.14 -2.38 -0.02 -0.13 16 37 H 0.10 -0.50 6.31 -2.39 -0.02 -0.52 16 38 H 0.17 -1.33 7.44 -2.91 -0.02 -1.36 16 39 H 0.16 -0.62 6.62 -2.91 -0.02 -0.64 16 40 H 0.11 -0.07 7.96 -2.38 -0.02 -0.09 16 41 H 0.40 -3.73 8.28 -74.05 -0.61 -4.34 16 42 H -0.27 0.28 6.76 99.48 0.67 0.96 16 43 H -0.29 -0.70 7.11 99.48 0.71 0.01 16 Total: 0.00 -18.64 366.93 0.94 -17.70 By element: Atomic # 1 Polarization: -13.96 SS G_CDS: -0.24 Total: -14.20 kcal Atomic # 6 Polarization: 5.51 SS G_CDS: 4.66 Total: 10.17 kcal Atomic # 7 Polarization: -0.21 SS G_CDS: -3.97 Total: -4.18 kcal Atomic # 8 Polarization: -5.93 SS G_CDS: -1.57 Total: -7.50 kcal Atomic # 14 Polarization: -3.79 SS G_CDS: 2.15 Total: -1.64 kcal Atomic # 17 Polarization: -0.27 SS G_CDS: -0.08 Total: -0.35 kcal Total: -18.64 0.94 -17.70 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705206_10803936.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 55.213 kcal (2) G-P(sol) polarization free energy of solvation -18.644 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 36.569 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.940 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.704 kcal (6) G-S(sol) free energy of system = (1) + (5) 37.510 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds