Wall clock time and date at job start Tue Mar 9 2021 12:53:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86300 * 109.47260 * 2 1 4 4 C 1.50696 * 109.47131 * 239.99890 * 2 1 3 5 5 C 1.38634 * 119.94253 * 75.02192 * 4 2 1 6 6 F 1.35102 * 119.87545 * 0.02562 * 5 4 2 7 7 C 1.38678 * 120.24143 * 179.97438 * 5 4 2 8 8 C 1.37818 * 120.11757 * 359.97438 * 7 5 4 9 9 C 1.39675 * 119.87833 * 0.02562 * 8 7 5 10 10 C 1.47722 * 120.11299 * 180.02562 * 9 8 7 11 11 O 1.21577 * 119.99691 * 179.97438 * 10 9 8 12 12 N 1.34774 * 120.00191 * 0.02562 * 10 9 8 13 13 C 1.46503 * 119.99911 * 179.97438 * 12 10 9 14 14 H 1.09004 * 112.85287 * 336.19422 * 13 12 10 15 15 C 1.53782 * 113.61623 * 107.50360 * 13 12 10 16 16 C 1.53772 * 87.08094 * 89.11426 * 15 13 12 17 17 H 1.09003 * 113.69345 * 270.87025 * 16 15 13 18 18 C 1.50707 * 113.61177 * 139.98273 * 16 15 13 19 19 C 1.38214 * 119.99394 * 322.22818 * 18 16 15 20 20 C 1.38261 * 120.02767 * 179.72911 * 19 18 16 21 21 C 1.38196 * 120.01260 * 0.54418 * 20 19 18 22 22 C 1.38377 * 119.98218 * 359.72942 * 21 20 19 23 23 Cl 1.73606 * 120.01188 * 180.02562 * 22 21 20 24 24 C 1.38241 * 119.99219 * 142.50239 * 18 16 15 25 25 C 1.53780 * 113.61423 * 205.00343 * 13 12 10 26 26 C 1.37865 * 119.93881 * 254.99951 * 4 2 1 27 27 H 0.96697 * 113.99835 * 59.99845 * 1 2 3 28 28 H 1.09009 * 109.47219 * 119.99781 * 2 1 3 29 29 H 1.48493 * 109.99918 * 298.67862 * 3 2 1 30 30 H 1.48498 * 110.00189 * 60.00066 * 3 2 1 31 31 H 1.08000 * 119.94066 * 180.02562 * 7 5 4 32 32 H 1.07992 * 120.05755 * 180.27811 * 8 7 5 33 33 H 0.96993 * 120.00358 * 0.02562 * 12 10 9 34 34 H 1.08996 * 113.61167 * 203.66653 * 15 13 12 35 35 H 1.08999 * 113.60800 * 334.56274 * 15 13 12 36 36 H 1.07997 * 119.98498 * 359.97438 * 19 18 16 37 37 H 1.08002 * 119.99761 * 180.27352 * 20 19 18 38 38 H 1.07995 * 120.00831 * 179.74793 * 21 20 19 39 39 H 1.08008 * 120.00568 * 359.97438 * 24 18 16 40 40 H 1.09003 * 113.61666 * 25.42460 * 25 13 12 41 41 H 1.08994 * 113.61941 * 156.33612 * 25 13 12 42 42 H 1.08000 * 120.06390 * 0.04748 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 1.8692 -0.0834 -2.4653 6 9 1.3587 1.1638 -2.5619 7 6 2.3302 -0.7312 -3.6015 8 6 2.8534 -2.0028 -3.5083 9 6 2.9183 -2.6392 -2.2667 10 6 3.4786 -4.0019 -2.1607 11 8 3.5345 -4.5537 -1.0788 12 7 3.9287 -4.6331 -3.2631 13 6 4.4848 -5.9844 -3.1579 14 1 4.8615 -6.2106 -2.1603 15 6 3.5664 -7.0752 -3.7336 16 6 4.2612 -6.8368 -5.0845 17 1 3.7871 -6.0649 -5.6908 18 6 4.5315 -8.1029 -5.8560 19 6 4.9170 -9.2500 -5.1882 20 6 5.1598 -10.4134 -5.8947 21 6 5.0279 -10.4270 -7.2703 22 6 4.6473 -9.2774 -7.9400 23 17 4.4808 -9.2939 -9.6679 24 6 4.3992 -8.1153 -7.2320 25 6 5.4732 -6.3331 -4.2832 26 6 2.4522 -1.9826 -1.1259 27 1 -0.3933 0.4417 -0.7650 28 1 1.7924 -0.5138 0.8901 29 1 1.5880 2.4585 -1.2242 30 1 1.5616 2.4679 1.2085 31 1 2.2799 -0.2380 -4.5610 32 1 3.2162 -2.5046 -4.3930 33 1 3.8851 -4.1925 -4.1261 34 1 3.7501 -8.0654 -3.3168 35 1 2.5109 -6.8030 -3.7314 36 1 5.0249 -9.2385 -4.1137 37 1 5.4568 -11.3106 -5.3720 38 1 5.2214 -11.3347 -7.8225 39 1 4.1018 -7.2178 -7.7541 40 1 5.9571 -5.4619 -4.7249 41 1 6.1782 -7.1204 -4.0167 42 1 2.4997 -2.4704 -0.1635 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705206_12496548.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:53:36 Heat of formation + Delta-G solvation = -21.850696 kcal Electronic energy + Delta-G solvation = -28319.369092 eV Core-core repulsion = 23979.608433 eV Total energy + Delta-G solvation = -4339.760659 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.087 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -50.47191 -41.78694 -40.86935 -39.77936 -38.80360 -37.80723 -37.35498 -34.79884 -32.92052 -32.24323 -31.78769 -31.22676 -27.07540 -26.67530 -26.47564 -24.87682 -23.68810 -23.51901 -22.60968 -21.63575 -20.21949 -19.27049 -18.91064 -18.22648 -17.89148 -17.85887 -17.16484 -16.98768 -16.54302 -16.37523 -16.19640 -16.09960 -15.64026 -15.49081 -15.38348 -15.03000 -14.77450 -14.72641 -14.60089 -14.31168 -14.03633 -13.86870 -13.64003 -13.43854 -13.35195 -12.97270 -12.88553 -12.54791 -12.42696 -12.35959 -12.24831 -11.70890 -11.62796 -11.35704 -11.21939 -11.20131 -10.87160 -10.22210 -10.11380 -9.84127 -9.81911 -9.58820 -4.97448 -0.51855 0.02310 0.17548 0.29742 1.16144 1.19388 1.55922 1.58510 1.92805 2.00197 2.55417 2.61746 2.97104 3.23115 3.44214 3.47044 3.53798 3.60188 3.64798 3.73413 3.89828 3.96925 3.98656 4.10942 4.14306 4.15657 4.30847 4.32066 4.45389 4.61622 4.67434 4.70968 4.77275 4.80537 4.86547 4.90020 4.96021 4.99527 5.01576 5.05063 5.09025 5.16624 5.27661 5.39740 5.48279 5.59505 5.65805 5.86084 6.30240 6.44084 7.11667 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.083 4.083 3 Si 0.750 3.250 4 C -0.155 4.155 5 C 0.109 3.891 6 F -0.131 7.131 7 C -0.147 4.147 8 C -0.039 4.039 9 C -0.152 4.152 10 C 0.563 3.437 11 O -0.574 6.574 12 N -0.693 5.693 13 C 0.115 3.885 14 H 0.090 0.910 15 C -0.143 4.143 16 C -0.067 4.067 17 H 0.114 0.886 18 C -0.060 4.060 19 C -0.117 4.117 20 C -0.108 4.108 21 C -0.128 4.128 22 C -0.049 4.049 23 Cl -0.082 7.082 24 C -0.116 4.116 25 C -0.123 4.123 26 C -0.021 4.021 27 H 0.384 0.616 28 H 0.130 0.870 29 H -0.253 1.253 30 H -0.308 1.308 31 H 0.171 0.829 32 H 0.175 0.825 33 H 0.416 0.584 34 H 0.100 0.900 35 H 0.068 0.932 36 H 0.146 0.854 37 H 0.150 0.850 38 H 0.137 0.863 39 H 0.141 0.859 40 H 0.091 0.909 41 H 0.103 0.897 42 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.106 0.031 -3.989 5.725 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.192 4.192 3 Si 0.654 3.346 4 C -0.157 4.157 5 C 0.089 3.911 6 F -0.109 7.109 7 C -0.165 4.165 8 C -0.058 4.058 9 C -0.156 4.156 10 C 0.352 3.648 11 O -0.455 6.455 12 N -0.345 5.345 13 C 0.009 3.991 14 H 0.108 0.892 15 C -0.181 4.181 16 C -0.085 4.085 17 H 0.132 0.868 18 C -0.061 4.061 19 C -0.134 4.134 20 C -0.126 4.126 21 C -0.147 4.147 22 C -0.075 4.075 23 Cl -0.053 7.053 24 C -0.135 4.135 25 C -0.161 4.161 26 C -0.040 4.040 27 H 0.233 0.767 28 H 0.148 0.852 29 H -0.178 1.178 30 H -0.236 1.236 31 H 0.189 0.811 32 H 0.192 0.808 33 H 0.255 0.745 34 H 0.118 0.882 35 H 0.086 0.914 36 H 0.164 0.836 37 H 0.167 0.833 38 H 0.155 0.845 39 H 0.159 0.841 40 H 0.110 0.890 41 H 0.122 0.878 42 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 4.005 0.191 -2.872 4.932 hybrid contribution -1.472 0.065 -0.935 1.745 sum 2.533 0.256 -3.807 4.580 Atomic orbital electron populations 1.86623 1.18179 1.80272 1.50070 1.25165 0.83564 1.12111 0.98331 0.94643 0.90263 0.72748 0.76972 1.20140 1.04625 0.96380 0.94525 1.18132 0.97684 0.80345 0.94939 1.91557 1.84715 1.38209 1.96441 1.21407 1.00608 0.95965 0.98563 1.21513 0.93991 0.93349 0.96912 1.19972 1.05495 0.94814 0.95287 1.18327 0.77075 0.85456 0.83973 1.90806 1.57376 1.68287 1.28988 1.45442 1.62129 1.16545 1.10363 1.21884 0.95341 0.81436 1.00390 0.89179 1.23577 0.99555 0.99807 0.95194 1.21644 0.97997 0.94390 0.94478 0.86773 1.19807 0.97991 0.95901 0.92351 1.21408 0.98518 0.92147 1.01375 1.21412 0.98685 0.99500 0.93022 1.21297 1.00503 0.97484 0.95420 1.21145 1.05159 0.96685 0.84511 1.98384 1.96356 1.98851 1.11734 1.21139 1.00989 0.97237 0.94113 1.23390 0.95861 1.02532 0.94298 1.21026 0.92096 0.91564 0.99308 0.76744 0.85197 1.17764 1.23604 0.81120 0.80789 0.74511 0.88199 0.91366 0.83630 0.83265 0.84536 0.84081 0.89004 0.87831 0.84234 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -2.49 12.88 -148.98 -1.92 -4.41 16 2 C -0.08 -0.07 2.80 71.23 0.20 0.12 16 3 Si 0.75 0.11 30.81 68.60 2.11 2.23 16 4 C -0.16 0.03 4.78 -19.86 -0.09 -0.07 16 5 C 0.11 -0.19 6.63 22.47 0.15 -0.04 16 6 F -0.13 -0.11 12.57 44.97 0.57 0.46 16 7 C -0.15 0.99 10.01 22.28 0.22 1.21 16 8 C -0.04 0.32 9.54 22.52 0.21 0.54 16 9 C -0.15 0.29 5.87 -20.09 -0.12 0.17 16 10 C 0.56 0.66 7.77 86.75 0.67 1.33 16 11 O -0.57 -5.90 15.94 -3.96 -0.06 -5.97 16 12 N -0.69 4.04 5.21 -443.01 -2.31 1.73 16 13 C 0.11 -0.58 4.32 45.52 0.20 -0.38 16 14 H 0.09 -0.05 7.46 -2.38 -0.02 -0.06 16 15 C -0.14 0.81 7.25 31.12 0.23 1.03 16 16 C -0.07 0.54 3.86 -11.01 -0.04 0.49 16 17 H 0.11 -1.23 8.09 -2.39 -0.02 -1.25 16 18 C -0.06 0.24 5.29 -19.87 -0.11 0.14 16 19 C -0.12 0.49 8.60 22.27 0.19 0.68 16 20 C -0.11 0.32 10.05 22.27 0.22 0.55 16 21 C -0.13 0.04 9.83 22.29 0.22 0.26 16 22 C -0.05 -0.05 6.32 22.32 0.14 0.09 16 23 Cl -0.08 -0.21 28.96 -2.72 -0.08 -0.29 16 24 C -0.12 0.19 9.49 22.29 0.21 0.40 16 25 C -0.12 1.09 7.29 31.12 0.23 1.32 16 26 C -0.02 -0.02 9.21 22.52 0.21 0.19 16 27 H 0.38 -0.20 8.41 -74.06 -0.62 -0.82 16 28 H 0.13 -0.10 7.77 -2.38 -0.02 -0.12 16 29 H -0.25 -0.88 5.27 99.48 0.52 -0.36 16 30 H -0.31 -2.47 7.11 99.48 0.71 -1.76 16 31 H 0.17 -1.96 8.06 -2.91 -0.02 -1.98 16 32 H 0.17 -2.81 6.40 -2.91 -0.02 -2.83 16 33 H 0.42 -5.24 6.73 -92.71 -0.62 -5.86 16 34 H 0.10 -0.61 6.32 -2.39 -0.02 -0.62 16 35 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 36 H 0.15 -1.13 6.67 -2.91 -0.02 -1.15 16 37 H 0.15 -1.04 8.06 -2.91 -0.02 -1.06 16 38 H 0.14 -0.27 8.06 -2.91 -0.02 -0.30 16 39 H 0.14 -0.61 8.06 -2.91 -0.02 -0.63 16 40 H 0.09 -0.99 8.14 -2.39 -0.02 -1.01 16 41 H 0.10 -0.91 7.71 -2.39 -0.02 -0.93 16 42 H 0.14 0.33 7.59 -2.91 -0.02 0.31 16 Total: 0.00 -19.85 369.33 0.95 -18.89 By element: Atomic # 1 Polarization: -20.40 SS G_CDS: -0.30 Total: -20.69 kcal Atomic # 6 Polarization: 5.10 SS G_CDS: 2.94 Total: 8.04 kcal Atomic # 7 Polarization: 4.04 SS G_CDS: -2.31 Total: 1.73 kcal Atomic # 8 Polarization: -8.39 SS G_CDS: -1.98 Total: -10.37 kcal Atomic # 9 Polarization: -0.11 SS G_CDS: 0.57 Total: 0.46 kcal Atomic # 14 Polarization: 0.11 SS G_CDS: 2.11 Total: 2.23 kcal Atomic # 17 Polarization: -0.21 SS G_CDS: -0.08 Total: -0.29 kcal Total: -19.85 0.95 -18.89 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705206_12496548.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -2.956 kcal (2) G-P(sol) polarization free energy of solvation -19.849 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -22.805 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.955 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.895 kcal (6) G-S(sol) free energy of system = (1) + (5) -21.851 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds