Wall clock time and date at job start Tue Mar 9 2021 12:53:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86307 * 109.47274 * 2 1 4 4 C 1.50697 * 109.47324 * 119.99980 * 2 1 3 5 5 C 1.38335 * 119.87241 * 64.99955 * 4 2 1 6 6 C 1.37996 * 120.13110 * 180.02562 * 5 4 2 7 7 C 1.39410 * 119.87030 * 359.97438 * 6 5 4 8 8 C 1.48277 * 120.12693 * 179.97438 * 7 6 5 9 9 C 1.39503 * 119.97480 * 180.02562 * 8 7 6 10 10 C 1.37665 * 120.02325 * 179.97438 * 9 8 7 11 11 C 1.39704 * 119.97427 * 0.02562 * 10 9 8 12 12 C 1.47727 * 120.02193 * 179.97438 * 11 10 9 13 13 O 1.21569 * 119.99959 * 359.97438 * 12 11 10 14 14 N 1.34772 * 120.00021 * 179.97438 * 12 11 10 15 15 C 1.46497 * 119.99931 * 179.97438 * 14 12 11 16 16 H 1.08996 * 112.85347 * 23.80053 * 15 14 12 17 17 C 1.53782 * 113.61501 * 155.00066 * 15 14 12 18 18 C 1.53782 * 87.08341 * 89.11423 * 17 15 14 19 19 H 1.09003 * 113.61539 * 270.88965 * 18 17 15 20 20 C 1.50697 * 113.61525 * 140.06763 * 18 17 15 21 21 C 1.38225 * 119.98964 * 299.72395 * 20 18 17 22 22 C 1.38266 * 120.02356 * 179.77150 * 21 20 18 23 23 C 1.38197 * 120.01154 * 0.50455 * 22 21 20 24 24 C 1.38372 * 119.98636 * 359.75122 * 23 22 21 25 25 Cl 1.73601 * 120.01233 * 179.97438 * 24 23 22 26 26 C 1.38231 * 119.99427 * 120.00425 * 20 18 17 27 27 C 1.53780 * 87.08242 * 25.43326 * 18 17 15 28 28 C 1.39700 * 119.95516 * 359.97438 * 11 10 9 29 29 C 1.37668 * 119.97486 * 0.02562 * 28 11 10 30 30 C 1.39397 * 119.74312 * 0.25741 * 7 6 5 31 31 C 1.38002 * 119.87190 * 359.50868 * 30 7 6 32 32 H 0.96704 * 113.99956 * 59.99601 * 1 2 3 33 33 H 1.08998 * 109.47191 * 239.99967 * 2 1 3 34 34 H 1.48497 * 109.99920 * 59.99942 * 3 2 1 35 35 H 1.48497 * 110.00099 * 181.31970 * 3 2 1 36 36 H 1.07999 * 119.93237 * 359.97438 * 5 4 2 37 37 H 1.08001 * 120.06844 * 180.02562 * 6 5 4 38 38 H 1.07999 * 119.98279 * 0.25649 * 9 8 7 39 39 H 1.08002 * 120.00573 * 179.97438 * 10 9 8 40 40 H 0.96998 * 119.99891 * 359.97438 * 14 12 11 41 41 H 1.08996 * 113.61434 * 203.66457 * 17 15 14 42 42 H 1.09003 * 113.61381 * 334.48265 * 17 15 14 43 43 H 1.07995 * 119.98971 * 0.02562 * 21 20 18 44 44 H 1.07994 * 119.99303 * 180.25800 * 22 21 20 45 45 H 1.07998 * 120.00291 * 179.77106 * 23 22 21 46 46 H 1.08002 * 120.00787 * 359.97438 * 26 20 18 47 47 H 1.08993 * 113.61832 * 220.02191 * 27 18 17 48 48 H 1.09003 * 113.61637 * 89.11368 * 27 18 17 49 49 H 1.08001 * 120.01408 * 179.97438 * 28 11 10 50 50 H 1.07999 * 119.99139 * 179.97438 * 29 28 11 51 51 H 1.08001 * 120.06592 * 179.72329 * 30 7 6 52 52 H 1.08002 * 119.93739 * 180.22772 * 31 30 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 1.6831 -2.0612 1.3958 6 6 2.1402 -2.7169 2.5207 7 6 2.8539 -2.0155 3.4913 8 6 3.3472 -2.7142 4.7025 9 6 4.0606 -2.0091 5.6720 10 6 4.5186 -2.6567 6.7971 11 6 4.2692 -4.0207 6.9675 12 6 4.7607 -4.7169 8.1742 13 8 5.3828 -4.1029 9.0192 14 7 4.5193 -6.0326 8.3384 15 6 5.0072 -6.7231 9.5348 16 1 5.1686 -6.0493 10.3762 17 6 4.1941 -7.9771 9.8970 18 6 5.1514 -8.7647 8.9871 19 1 4.8278 -8.8091 7.9471 20 6 5.5355 -10.1136 9.5384 21 6 6.1881 -10.2029 10.7537 22 6 6.5366 -11.4404 11.2625 23 6 6.2419 -12.5881 10.5513 24 6 5.5934 -12.4989 9.3322 25 17 5.2235 -13.9402 8.4379 26 6 5.2403 -11.2609 8.8261 27 6 6.1913 -7.6658 9.2622 28 6 3.5547 -4.7259 5.9960 29 6 3.0976 -4.0763 4.8716 30 6 3.0968 -0.6533 3.3216 31 6 2.6390 -0.0092 2.1902 32 1 -0.3933 0.4418 -0.7650 33 1 1.7923 -0.5138 -0.8900 34 1 1.5615 2.4679 1.2085 35 1 3.5346 1.7703 -0.0321 36 1 1.1297 -2.6035 0.6434 37 1 1.9461 -3.7716 2.6485 38 1 4.2496 -0.9538 5.5419 39 1 5.0712 -2.1107 7.5474 40 1 4.0226 -6.5224 7.6644 41 1 4.2644 -8.2543 10.9488 42 1 3.1667 -7.9512 9.5339 43 1 6.4221 -9.3061 11.3079 44 1 7.0427 -11.5099 12.2139 45 1 6.5175 -13.5544 10.9471 46 1 4.7341 -11.1907 7.8747 47 1 6.7767 -7.3892 8.3854 48 1 6.8077 -7.8579 10.1405 49 1 3.3616 -5.7805 6.1266 50 1 2.5455 -4.6212 4.1202 51 1 3.6453 -0.1039 4.0724 52 1 2.8298 1.0453 2.0559 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705206_13158362.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:53:57 Heat of formation + Delta-G solvation = 41.515376 kcal Electronic energy + Delta-G solvation = -34477.452778 eV Core-core repulsion = 29785.914054 eV Total energy + Delta-G solvation = -4691.538724 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 420.128 amu Computer time = 1.61 seconds Orbital eigenvalues (eV) -41.83061 -41.15604 -40.53989 -39.47012 -38.74263 -37.51771 -37.37325 -34.90895 -34.04354 -32.70803 -32.12288 -31.70239 -31.51462 -30.75695 -27.25994 -26.72298 -26.18861 -24.78056 -24.50248 -23.70888 -22.87696 -22.58635 -22.32320 -21.40446 -20.24498 -19.26533 -18.38827 -18.37538 -18.00434 -17.36209 -16.96986 -16.81355 -16.53583 -16.41524 -16.16591 -16.01437 -15.81135 -15.52685 -15.35276 -15.17397 -15.04587 -14.88821 -14.70815 -14.61910 -14.45954 -14.33769 -14.25934 -13.89574 -13.71625 -13.64017 -13.48371 -13.32469 -12.92559 -12.91992 -12.60131 -12.56153 -12.44630 -12.29778 -12.27194 -11.92652 -11.78989 -11.74074 -11.66329 -11.25671 -11.16536 -10.85870 -10.29727 -10.17912 -10.13163 -10.10241 -9.86431 -9.61493 -9.16987 -4.97241 -0.78096 0.15283 0.22803 0.27387 0.28910 0.39861 1.14156 1.28123 1.60640 1.71659 1.94456 1.97585 2.48719 2.59156 2.90872 3.30235 3.39966 3.42858 3.52528 3.60619 3.63713 3.70741 3.74498 3.82001 3.86577 3.88662 3.94585 3.97506 4.09705 4.13161 4.17070 4.19792 4.23945 4.28134 4.41881 4.42786 4.53059 4.58896 4.62294 4.68249 4.75347 4.76571 4.81727 4.83183 4.93166 4.96352 4.97604 5.00204 5.02839 5.10184 5.11386 5.19036 5.25324 5.30593 5.36433 5.37425 5.45794 5.54001 5.61628 5.72099 5.79755 5.83626 6.40553 6.89039 7.08107 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.563 6.563 2 C -0.077 4.077 3 Si 0.768 3.232 4 C -0.088 4.088 5 C -0.096 4.096 6 C -0.102 4.102 7 C -0.059 4.059 8 C -0.024 4.024 9 C -0.126 4.126 10 C -0.069 4.069 11 C -0.150 4.150 12 C 0.560 3.440 13 O -0.579 6.579 14 N -0.694 5.694 15 C 0.113 3.887 16 H 0.088 0.912 17 C -0.123 4.123 18 C -0.066 4.066 19 H 0.113 0.887 20 C -0.060 4.060 21 C -0.117 4.117 22 C -0.107 4.107 23 C -0.127 4.127 24 C -0.048 4.048 25 Cl -0.081 7.081 26 C -0.116 4.116 27 C -0.141 4.141 28 C -0.071 4.071 29 C -0.117 4.117 30 C -0.110 4.110 31 C -0.143 4.143 32 H 0.404 0.596 33 H 0.098 0.902 34 H -0.299 1.299 35 H -0.291 1.291 36 H 0.146 0.854 37 H 0.157 0.843 38 H 0.141 0.859 39 H 0.128 0.872 40 H 0.415 0.585 41 H 0.104 0.896 42 H 0.089 0.911 43 H 0.145 0.855 44 H 0.150 0.850 45 H 0.138 0.862 46 H 0.141 0.859 47 H 0.067 0.933 48 H 0.101 0.899 49 H 0.162 0.838 50 H 0.160 0.840 51 H 0.140 0.860 52 H 0.116 0.884 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.909 -1.077 -5.251 6.099 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.373 6.373 2 C -0.187 4.187 3 Si 0.675 3.325 4 C -0.088 4.088 5 C -0.114 4.114 6 C -0.120 4.120 7 C -0.059 4.059 8 C -0.024 4.024 9 C -0.144 4.144 10 C -0.088 4.088 11 C -0.153 4.153 12 C 0.349 3.651 13 O -0.459 6.459 14 N -0.346 5.346 15 C 0.007 3.993 16 H 0.106 0.894 17 C -0.161 4.161 18 C -0.084 4.084 19 H 0.131 0.869 20 C -0.060 4.060 21 C -0.135 4.135 22 C -0.125 4.125 23 C -0.146 4.146 24 C -0.074 4.074 25 Cl -0.052 7.052 26 C -0.135 4.135 27 C -0.180 4.180 28 C -0.090 4.090 29 C -0.134 4.134 30 C -0.128 4.128 31 C -0.160 4.160 32 H 0.255 0.745 33 H 0.116 0.884 34 H -0.227 1.227 35 H -0.218 1.218 36 H 0.164 0.836 37 H 0.175 0.825 38 H 0.158 0.842 39 H 0.146 0.854 40 H 0.254 0.746 41 H 0.123 0.877 42 H 0.108 0.892 43 H 0.163 0.837 44 H 0.168 0.832 45 H 0.156 0.844 46 H 0.159 0.841 47 H 0.086 0.914 48 H 0.120 0.880 49 H 0.179 0.821 50 H 0.177 0.823 51 H 0.158 0.842 52 H 0.133 0.867 Dipole moment (debyes) X Y Z Total from point charges -1.951 -0.523 -3.776 4.282 hybrid contribution 0.150 -0.619 0.065 0.640 sum -1.802 -1.142 -3.710 4.280 Atomic orbital electron populations 1.86440 1.17019 1.82358 1.51468 1.24772 0.85998 1.10587 0.97352 0.94467 0.77351 0.75978 0.84718 1.19843 0.98127 0.95119 0.95701 1.21215 0.98415 0.93469 0.98320 1.21639 0.96202 1.01370 0.92767 1.18941 0.99280 0.93286 0.94427 1.19111 0.96234 0.94183 0.92921 1.21344 0.98570 1.01019 0.93431 1.21238 0.96921 0.93574 0.97107 1.19994 1.04172 0.95038 0.96066 1.18496 0.78573 0.82293 0.85754 1.90777 1.42520 1.67211 1.45426 1.45462 1.56941 1.08408 1.23741 1.21903 0.95975 0.93377 0.88022 0.89377 1.23387 0.99029 0.92336 1.01346 1.21615 0.97228 0.89135 1.00442 0.86927 1.19772 0.97437 0.94279 0.94551 1.21408 0.97795 0.98622 0.95655 1.21411 0.99090 0.91503 1.00532 1.21303 0.99119 1.00664 0.93517 1.21133 1.03262 0.87981 0.95040 1.98384 1.93439 1.38229 1.75178 1.21130 1.01021 0.90189 1.01158 1.23572 0.96538 0.94705 1.03167 1.21496 0.94468 1.00961 0.92052 1.21482 1.00210 0.93146 0.98584 1.21382 0.99582 0.94343 0.97477 1.20976 1.00753 0.99086 0.95207 0.74475 0.88449 1.22707 1.21808 0.83606 0.82510 0.84168 0.85378 0.74626 0.87718 0.89243 0.83688 0.83195 0.84410 0.84147 0.91388 0.88036 0.82057 0.82261 0.84220 0.86674 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.64 12.81 -148.98 -1.91 -1.27 16 2 C -0.08 0.10 2.79 71.24 0.20 0.30 16 3 Si 0.77 -1.38 29.84 68.60 2.05 0.67 16 4 C -0.09 -0.34 5.39 -19.82 -0.11 -0.44 16 5 C -0.10 -0.15 9.67 22.24 0.21 0.07 16 6 C -0.10 -0.01 9.43 22.49 0.21 0.20 16 7 C -0.06 -0.15 5.88 -20.05 -0.12 -0.27 16 8 C -0.02 -0.03 5.88 -20.00 -0.12 -0.15 16 9 C -0.13 -0.32 9.41 22.44 0.21 -0.11 16 10 C -0.07 -0.32 9.58 22.49 0.22 -0.11 16 11 C -0.15 -0.40 5.88 -20.06 -0.12 -0.52 16 12 C 0.56 2.97 7.77 86.75 0.67 3.65 16 13 O -0.58 -8.16 15.93 -3.93 -0.06 -8.23 16 14 N -0.69 1.49 5.21 -443.01 -2.31 -0.82 16 15 C 0.11 -0.25 4.33 45.52 0.20 -0.05 16 16 H 0.09 0.21 7.46 -2.39 -0.02 0.19 16 17 C -0.12 0.80 7.29 31.12 0.23 1.02 16 18 C -0.07 0.40 3.85 -11.01 -0.04 0.35 16 19 H 0.11 -0.96 8.09 -2.39 -0.02 -0.97 16 20 C -0.06 0.16 5.29 -19.87 -0.11 0.06 16 21 C -0.12 0.36 8.63 22.27 0.19 0.55 16 22 C -0.11 0.24 10.05 22.27 0.22 0.46 16 23 C -0.13 -0.05 9.83 22.29 0.22 0.17 16 24 C -0.05 -0.09 6.32 22.32 0.14 0.05 16 25 Cl -0.08 -0.26 28.96 -2.72 -0.08 -0.34 16 26 C -0.12 0.05 9.49 22.29 0.21 0.27 16 27 C -0.14 0.51 7.25 31.12 0.23 0.73 16 28 C -0.07 0.25 9.52 22.49 0.21 0.46 16 29 C -0.12 0.32 9.41 22.44 0.21 0.54 16 30 C -0.11 -0.44 9.43 22.49 0.21 -0.23 16 31 C -0.14 -0.78 8.65 22.24 0.19 -0.59 16 32 H 0.40 -4.69 8.74 -74.05 -0.65 -5.34 16 33 H 0.10 -0.55 7.96 -2.39 -0.02 -0.57 16 34 H -0.30 -1.82 7.04 99.48 0.70 -1.12 16 35 H -0.29 -1.15 7.11 99.48 0.71 -0.44 16 36 H 0.15 -0.29 8.06 -2.91 -0.02 -0.32 16 37 H 0.16 -0.94 6.19 -2.91 -0.02 -0.95 16 38 H 0.14 -0.02 6.19 -2.91 -0.02 -0.03 16 39 H 0.13 0.79 7.64 -2.91 -0.02 0.77 16 40 H 0.42 -3.55 6.72 -92.71 -0.62 -4.18 16 41 H 0.10 -0.71 7.73 -2.39 -0.02 -0.73 16 42 H 0.09 -0.72 8.14 -2.39 -0.02 -0.74 16 43 H 0.15 -0.94 6.65 -2.91 -0.02 -0.96 16 44 H 0.15 -0.94 8.06 -2.91 -0.02 -0.96 16 45 H 0.14 -0.21 8.06 -2.91 -0.02 -0.23 16 46 H 0.14 -0.42 8.05 -2.91 -0.02 -0.45 16 47 H 0.07 -0.09 8.14 -2.39 -0.02 -0.11 16 48 H 0.10 -0.45 6.31 -2.39 -0.02 -0.46 16 49 H 0.16 -1.77 6.39 -2.91 -0.02 -1.79 16 50 H 0.16 -1.33 6.19 -2.91 -0.02 -1.35 16 51 H 0.14 0.11 6.19 -2.91 -0.02 0.09 16 52 H 0.12 0.61 4.85 -2.91 -0.01 0.59 16 Total: 0.00 -24.69 439.71 1.04 -23.65 By element: Atomic # 1 Polarization: -19.82 SS G_CDS: -0.23 Total: -20.05 kcal Atomic # 6 Polarization: 2.81 SS G_CDS: 3.59 Total: 6.39 kcal Atomic # 7 Polarization: 1.49 SS G_CDS: -2.31 Total: -0.82 kcal Atomic # 8 Polarization: -7.52 SS G_CDS: -1.97 Total: -9.50 kcal Atomic # 14 Polarization: -1.38 SS G_CDS: 2.05 Total: 0.67 kcal Atomic # 17 Polarization: -0.26 SS G_CDS: -0.08 Total: -0.34 kcal Total: -24.69 1.04 -23.65 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705206_13158362.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 65.161 kcal (2) G-P(sol) polarization free energy of solvation -24.688 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 40.473 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.043 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.645 kcal (6) G-S(sol) free energy of system = (1) + (5) 41.515 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.61 seconds