Wall clock time and date at job start Tue Mar 9 2021 12:54:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86297 * 109.47092 * 2 1 4 4 C 1.50704 * 109.47206 * 240.00206 * 2 1 3 5 5 C 1.38891 * 119.67441 * 120.02360 * 4 2 1 6 6 C 1.36473 * 120.61501 * 180.02562 * 5 4 2 7 7 C 1.40075 * 119.82753 * 359.97438 * 6 5 4 8 8 C 1.41599 * 133.37841 * 180.33482 * 7 6 5 9 9 C 1.35856 * 107.72462 * 180.09043 * 8 7 6 10 10 C 1.47061 * 125.42682 * 179.84781 * 9 8 7 11 11 O 1.21643 * 119.99846 * 359.69378 * 10 9 8 12 12 N 1.34777 * 119.99923 * 179.69061 * 10 9 8 13 13 C 1.46499 * 119.99665 * 179.72417 * 12 10 9 14 14 H 1.09000 * 112.85090 * 25.60669 * 13 12 10 15 15 C 1.53784 * 113.61758 * 156.80808 * 13 12 10 16 16 C 1.53785 * 87.08103 * 89.11402 * 15 13 12 17 17 H 1.09004 * 113.61810 * 270.80278 * 16 15 13 18 18 C 1.50702 * 113.61202 * 139.98370 * 16 15 13 19 19 C 1.38220 * 119.99428 * 299.72769 * 18 16 15 20 20 C 1.38264 * 120.02530 * 179.72462 * 19 18 16 21 21 C 1.38190 * 120.01406 * 0.55121 * 20 19 18 22 22 C 1.38376 * 119.98483 * 359.72014 * 21 20 19 23 23 Cl 1.73602 * 120.01395 * 180.02562 * 22 21 20 24 24 C 1.38234 * 119.99098 * 120.00208 * 18 16 15 25 25 C 1.53790 * 113.61381 * 254.41411 * 13 12 10 26 26 N 1.38156 * 109.15107 * 359.58078 * 9 8 7 27 27 C 1.37497 * 108.78489 * 0.27038 * 26 9 8 28 28 C 1.37714 * 119.67226 * 299.99657 * 4 2 1 29 29 H 0.96700 * 113.99909 * 60.00149 * 1 2 3 30 30 H 1.08993 * 109.46986 * 119.99820 * 2 1 3 31 31 H 1.48502 * 110.00154 * 59.99838 * 3 2 1 32 32 H 1.48496 * 110.00276 * 181.31764 * 3 2 1 33 33 H 1.08000 * 119.69581 * 0.02562 * 5 4 2 34 34 H 1.08001 * 120.09141 * 179.97438 * 6 5 4 35 35 H 1.07992 * 126.13533 * 359.93732 * 8 7 6 36 36 H 0.97001 * 120.00485 * 0.02562 * 12 10 9 37 37 H 1.08994 * 113.61705 * 203.66826 * 15 13 12 38 38 H 1.09002 * 113.60717 * 334.48962 * 15 13 12 39 39 H 1.08000 * 119.98569 * 359.97438 * 19 18 16 40 40 H 1.07998 * 119.99176 * 180.27436 * 20 19 18 41 41 H 1.07995 * 120.00865 * 179.70190 * 21 20 19 42 42 H 1.08004 * 120.01050 * 0.02562 * 24 18 16 43 43 H 1.08991 * 113.61523 * 25.43812 * 25 13 12 44 44 H 1.09003 * 113.60928 * 156.33750 * 25 13 12 45 45 H 0.96996 * 125.61298 * 180.24319 * 26 9 8 46 46 H 1.07999 * 120.09601 * 0.02875 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 2.7299 -0.0290 -2.1400 6 6 3.1949 -0.6534 -3.2609 7 6 2.8660 -1.9940 -3.4988 8 6 3.1853 -2.9046 -4.5352 9 6 2.5831 -4.0876 -4.2464 10 6 2.6561 -5.3045 -5.0689 11 8 3.2920 -5.3004 -6.1059 12 7 2.0185 -6.4242 -4.6738 13 6 2.0863 -7.6347 -5.4963 14 1 2.9801 -7.6738 -6.1189 15 6 1.8268 -8.9299 -4.7089 16 6 0.3355 -8.7322 -5.0281 17 1 -0.1939 -8.1329 -4.2874 18 6 -0.3839 -10.0121 -5.3679 19 6 0.0235 -10.7670 -6.4517 20 6 -0.6324 -11.9443 -6.7606 21 6 -1.7030 -12.3611 -5.9926 22 6 -2.1149 -11.6029 -4.9108 23 17 -3.4594 -12.1261 -3.9452 24 6 -1.4547 -10.4280 -4.5989 25 6 0.7872 -7.9313 -6.2641 26 7 1.8961 -3.9673 -3.0538 27 6 2.0569 -2.6876 -2.5774 28 6 1.5946 -2.0289 -1.4417 29 1 -0.3933 0.4417 -0.7651 30 1 1.7923 -0.5138 0.8899 31 1 1.5614 2.4679 1.2085 32 1 3.5345 1.7703 -0.0321 33 1 2.9852 1.0046 -1.9586 34 1 3.8149 -0.1153 -3.9627 35 1 3.7957 -2.6953 -5.4011 36 1 1.5112 -6.4275 -3.8471 37 1 2.2588 -9.8167 -5.1725 38 1 2.0617 -8.8500 -3.6475 39 1 0.8571 -10.4392 -7.0550 40 1 -0.3108 -12.5360 -7.6049 41 1 -2.2184 -13.2782 -6.2369 42 1 -1.7760 -9.8355 -3.7549 43 1 0.1823 -7.0455 -6.4572 44 1 0.9356 -8.5457 -7.1522 45 1 1.3841 -4.6698 -2.6235 46 1 0.9732 -2.5501 -0.7286 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705206_13158378.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:54:02 Heat of formation + Delta-G solvation = 45.390194 kcal Electronic energy + Delta-G solvation = -30486.300134 eV Core-core repulsion = 26141.493424 eV Total energy + Delta-G solvation = -4344.806710 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 383.108 amu Computer time = 1.24 seconds Orbital eigenvalues (eV) -42.73786 -41.55999 -40.38457 -39.16102 -38.73423 -37.39375 -36.87842 -34.78486 -33.27603 -32.17147 -31.59216 -30.95061 -30.40384 -27.32319 -26.75028 -26.09490 -24.48929 -23.72855 -23.23867 -22.61280 -22.01382 -21.32030 -20.29871 -19.57660 -18.47989 -18.20230 -17.78125 -17.08799 -16.85936 -16.57243 -16.53981 -16.38848 -16.11899 -15.71922 -15.60174 -15.46227 -15.18138 -14.93946 -14.78707 -14.67782 -14.65853 -14.51217 -14.35986 -14.09929 -13.63778 -13.49836 -13.15121 -12.94553 -12.61443 -12.58321 -12.51715 -12.46002 -12.29994 -12.02742 -11.78673 -11.69946 -11.64063 -11.43106 -11.28588 -10.97187 -10.43178 -10.29245 -9.87914 -9.62912 -9.33669 -8.83958 -4.94045 -0.38742 0.14100 0.26025 0.52215 0.92638 1.12871 1.35003 1.68172 1.71857 1.91367 2.02414 2.14461 2.57840 2.76986 3.38090 3.47424 3.56936 3.58558 3.66608 3.69869 3.73278 3.84580 3.91987 4.03774 4.07584 4.12088 4.24701 4.26522 4.29195 4.41135 4.43930 4.49903 4.57543 4.63006 4.65488 4.74250 4.79194 4.87885 4.90410 4.94522 4.98137 4.98308 5.06533 5.24022 5.28215 5.36324 5.39950 5.42563 5.53096 5.57148 5.58753 5.82607 5.97408 6.22252 6.40754 6.79697 6.91803 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.555 6.555 2 C -0.071 4.071 3 Si 0.777 3.223 4 C -0.089 4.089 5 C -0.148 4.148 6 C -0.058 4.058 7 C -0.135 4.135 8 C -0.116 4.116 9 C 0.010 3.990 10 C 0.589 3.411 11 O -0.557 6.557 12 N -0.696 5.696 13 C 0.115 3.885 14 H 0.094 0.906 15 C -0.123 4.123 16 C -0.068 4.068 17 H 0.110 0.890 18 C -0.061 4.061 19 C -0.116 4.116 20 C -0.107 4.107 21 C -0.127 4.127 22 C -0.048 4.048 23 Cl -0.082 7.082 24 C -0.118 4.118 25 C -0.140 4.140 26 N -0.565 5.565 27 C 0.108 3.892 28 C -0.110 4.110 29 H 0.396 0.604 30 H 0.109 0.891 31 H -0.302 1.302 32 H -0.286 1.286 33 H 0.147 0.853 34 H 0.148 0.852 35 H 0.156 0.844 36 H 0.411 0.589 37 H 0.107 0.893 38 H 0.087 0.913 39 H 0.148 0.852 40 H 0.151 0.849 41 H 0.138 0.862 42 H 0.139 0.861 43 H 0.068 0.932 44 H 0.104 0.896 45 H 0.431 0.569 46 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.641 0.245 -0.463 0.827 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.363 6.363 2 C -0.181 4.181 3 Si 0.683 3.317 4 C -0.091 4.091 5 C -0.166 4.166 6 C -0.076 4.076 7 C -0.140 4.140 8 C -0.144 4.144 9 C -0.100 4.100 10 C 0.377 3.623 11 O -0.435 6.435 12 N -0.347 5.347 13 C 0.010 3.990 14 H 0.113 0.887 15 C -0.161 4.161 16 C -0.086 4.086 17 H 0.128 0.872 18 C -0.061 4.061 19 C -0.134 4.134 20 C -0.125 4.125 21 C -0.146 4.146 22 C -0.075 4.075 23 Cl -0.053 7.053 24 C -0.136 4.136 25 C -0.179 4.179 26 N -0.171 5.171 27 C -0.003 4.003 28 C -0.131 4.131 29 H 0.246 0.754 30 H 0.126 0.874 31 H -0.231 1.231 32 H -0.213 1.213 33 H 0.164 0.836 34 H 0.166 0.834 35 H 0.174 0.826 36 H 0.248 0.752 37 H 0.126 0.874 38 H 0.106 0.894 39 H 0.165 0.835 40 H 0.169 0.831 41 H 0.156 0.844 42 H 0.157 0.843 43 H 0.086 0.914 44 H 0.123 0.877 45 H 0.271 0.729 46 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 0.176 0.269 -0.139 0.351 hybrid contribution -0.686 -1.215 0.898 1.659 sum -0.509 -0.946 0.759 1.315 Atomic orbital electron populations 1.86464 1.17120 1.82150 1.50572 1.25154 0.85316 1.10694 0.96924 0.93571 0.77948 0.75498 0.84651 1.20157 0.98169 0.93838 0.96903 1.20693 1.00446 1.00535 0.94964 1.20643 0.97868 0.91837 0.97251 1.18445 1.03318 0.95650 0.96553 1.21109 1.02049 0.91077 1.00132 1.19962 1.03738 0.96187 0.90088 1.17254 0.78757 0.82206 0.84130 1.90862 1.43419 1.84067 1.25120 1.45440 1.52316 1.10489 1.26428 1.21938 0.99486 0.83853 0.93757 0.88741 1.23388 0.94100 0.96719 1.01855 1.21673 0.95171 0.92829 0.98907 0.87233 1.19772 0.94859 0.96567 0.94900 1.21418 1.00533 0.94440 0.96959 1.21424 0.94586 0.96765 0.99711 1.21308 0.98313 1.00522 0.94451 1.21141 0.92885 0.97506 0.95944 1.98385 1.45419 1.90474 1.71037 1.21123 0.96089 0.95321 1.01097 1.23625 0.96268 1.00303 0.97696 1.41786 1.45040 1.11150 1.19084 1.18439 1.00166 0.85075 0.96610 1.19981 1.02805 0.94414 0.95878 0.75419 0.87350 1.23068 1.21255 0.83636 0.83436 0.82631 0.75240 0.87446 0.89395 0.83458 0.83100 0.84428 0.84348 0.91352 0.87737 0.72851 0.84775 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.84 12.76 -148.98 -1.90 -1.06 16 2 C -0.07 0.15 2.81 71.24 0.20 0.35 16 3 Si 0.78 -2.46 29.75 68.60 2.04 -0.41 16 4 C -0.09 0.10 5.40 -19.83 -0.11 -0.01 16 5 C -0.15 0.29 8.59 22.01 0.19 0.48 16 6 C -0.06 0.02 10.06 22.30 0.22 0.24 16 7 C -0.14 -0.38 6.16 -21.36 -0.13 -0.51 16 8 C -0.12 -0.47 10.53 22.55 0.24 -0.23 16 9 C 0.01 0.02 6.96 39.91 0.28 0.30 16 10 C 0.59 1.87 7.80 86.56 0.68 2.55 16 11 O -0.56 -6.30 16.46 -4.17 -0.07 -6.37 16 12 N -0.70 2.87 5.26 -443.63 -2.33 0.53 16 13 C 0.11 -0.49 4.29 45.52 0.20 -0.29 16 14 H 0.09 -0.04 7.50 -2.39 -0.02 -0.05 16 15 C -0.12 0.97 7.29 31.12 0.23 1.20 16 16 C -0.07 0.48 3.87 -10.92 -0.04 0.43 16 17 H 0.11 -1.01 8.09 -2.38 -0.02 -1.02 16 18 C -0.06 0.21 5.29 -19.87 -0.11 0.11 16 19 C -0.12 0.47 8.63 22.27 0.19 0.66 16 20 C -0.11 0.31 10.05 22.26 0.22 0.54 16 21 C -0.13 0.01 9.83 22.29 0.22 0.23 16 22 C -0.05 -0.08 6.32 22.33 0.14 0.06 16 23 Cl -0.08 -0.26 28.96 -2.72 -0.08 -0.33 16 24 C -0.12 0.10 9.49 22.29 0.21 0.31 16 25 C -0.14 0.73 7.27 31.22 0.23 0.96 16 26 N -0.56 1.44 6.07 -177.19 -1.08 0.37 16 27 C 0.11 0.11 7.25 39.13 0.28 0.39 16 28 C -0.11 0.03 9.61 22.37 0.22 0.25 16 29 H 0.40 -3.65 8.70 -74.06 -0.64 -4.29 16 30 H 0.11 -0.12 7.96 -2.39 -0.02 -0.14 16 31 H -0.30 -1.40 7.11 99.48 0.71 -0.70 16 32 H -0.29 -0.46 7.10 99.48 0.71 0.25 16 33 H 0.15 -0.89 4.82 -2.91 -0.01 -0.90 16 34 H 0.15 -0.63 8.06 -2.91 -0.02 -0.66 16 35 H 0.16 0.55 8.06 -2.91 -0.02 0.53 16 36 H 0.41 -4.13 7.76 -92.71 -0.72 -4.85 16 37 H 0.11 -0.90 7.73 -2.39 -0.02 -0.92 16 38 H 0.09 -0.81 8.14 -2.39 -0.02 -0.83 16 39 H 0.15 -1.16 6.64 -2.91 -0.02 -1.18 16 40 H 0.15 -1.07 8.06 -2.91 -0.02 -1.09 16 41 H 0.14 -0.26 8.06 -2.91 -0.02 -0.28 16 42 H 0.14 -0.43 8.05 -2.91 -0.02 -0.46 16 43 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 44 H 0.10 -0.65 6.30 -2.39 -0.02 -0.66 16 45 H 0.43 -3.99 8.12 -92.71 -0.75 -4.74 16 46 H 0.13 -0.31 8.06 -2.91 -0.02 -0.33 16 Total: 0.00 -20.93 399.23 -0.87 -21.80 By element: Atomic # 1 Polarization: -21.54 SS G_CDS: -1.00 Total: -22.54 kcal Atomic # 6 Polarization: 4.46 SS G_CDS: 3.55 Total: 8.02 kcal Atomic # 7 Polarization: 4.31 SS G_CDS: -3.41 Total: 0.90 kcal Atomic # 8 Polarization: -5.46 SS G_CDS: -1.97 Total: -7.43 kcal Atomic # 14 Polarization: -2.46 SS G_CDS: 2.04 Total: -0.41 kcal Atomic # 17 Polarization: -0.26 SS G_CDS: -0.08 Total: -0.33 kcal Total: -20.93 -0.87 -21.80 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705206_13158378.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 67.192 kcal (2) G-P(sol) polarization free energy of solvation -20.934 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 46.258 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.868 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.802 kcal (6) G-S(sol) free energy of system = (1) + (5) 45.390 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.24 seconds