Wall clock time and date at job start Tue Mar 9 2021 12:54:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86298 * 109.47115 * 2 1 4 4 C 1.50700 * 109.47532 * 120.00474 * 2 1 3 5 5 C 1.38357 * 120.34826 * 64.99504 * 4 2 1 6 6 C 1.40021 * 118.28790 * 180.02562 * 5 4 2 7 7 C 1.47836 * 120.56146 * 179.97438 * 6 5 4 8 8 O 1.21553 * 119.99786 * 0.02562 * 7 6 5 9 9 N 1.34775 * 119.99999 * 180.02562 * 7 6 5 10 10 C 1.46506 * 119.99694 * 180.02562 * 9 7 6 11 11 H 1.09001 * 112.85134 * 336.19446 * 10 9 7 12 12 C 1.53775 * 113.61322 * 107.50282 * 10 9 7 13 13 C 1.53791 * 87.08170 * 89.11513 * 12 10 9 14 14 H 1.09002 * 113.68801 * 270.87155 * 13 12 10 15 15 C 1.50699 * 113.61207 * 139.97749 * 13 12 10 16 16 C 1.38226 * 119.98636 * 142.50400 * 15 13 12 17 17 C 1.38262 * 120.02265 * 179.97438 * 16 15 13 18 18 C 1.38198 * 120.01341 * 359.97100 * 17 16 15 19 19 C 1.38365 * 119.98813 * 0.02753 * 18 17 16 20 20 Cl 1.73603 * 120.01643 * 179.97438 * 19 18 17 21 21 C 1.38231 * 119.99737 * 322.22948 * 15 13 12 22 22 C 1.53782 * 87.07903 * 25.43351 * 13 12 10 23 23 C 1.39523 * 118.88112 * 0.02562 * 6 5 4 24 24 N 1.31694 * 120.56847 * 0.02562 * 23 6 5 25 25 C 1.31933 * 121.87963 * 359.97438 * 24 23 6 26 26 H 0.96701 * 114.00352 * 59.99532 * 1 2 3 27 27 H 1.09010 * 109.46743 * 240.00117 * 2 1 3 28 28 H 1.48500 * 110.00037 * 60.00411 * 3 2 1 29 29 H 1.48503 * 109.99979 * 181.32405 * 3 2 1 30 30 H 1.07994 * 120.85854 * 0.04271 * 5 4 2 31 31 H 0.96995 * 120.00170 * 0.02562 * 9 7 6 32 32 H 1.09006 * 113.61424 * 203.66208 * 12 10 9 33 33 H 1.09001 * 113.61843 * 334.56816 * 12 10 9 34 34 H 1.07995 * 119.99222 * 359.97438 * 16 15 13 35 35 H 1.08007 * 119.99416 * 179.97438 * 17 16 15 36 36 H 1.08002 * 120.00338 * 180.02562 * 18 17 16 37 37 H 1.08001 * 120.00386 * 0.02562 * 21 15 13 38 38 H 1.09000 * 113.61143 * 220.02310 * 22 13 12 39 39 H 1.08993 * 113.62047 * 89.11891 * 22 13 12 40 40 H 1.07998 * 119.72093 * 180.02562 * 23 6 5 41 41 H 1.08000 * 119.45784 * 179.97438 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 1.6886 -2.0613 1.4057 6 6 2.1748 -2.6778 2.5651 7 6 1.9438 -4.1184 2.8037 8 8 1.3276 -4.7781 1.9896 9 7 2.4163 -4.7002 3.9238 10 6 2.1878 -6.1279 4.1599 11 1 1.3204 -6.5122 3.6232 12 6 3.4502 -6.9898 3.9918 13 6 3.7284 -6.7333 5.4825 14 1 4.3197 -5.8369 5.6697 15 6 4.2498 -7.9421 6.2159 16 6 5.2156 -7.7937 7.1935 17 6 5.6941 -8.9022 7.8673 18 6 5.2064 -10.1592 7.5641 19 6 4.2396 -10.3084 6.5856 20 17 3.6269 -11.8872 6.2036 21 6 3.7579 -9.1984 5.9149 22 6 2.2146 -6.5183 5.6472 23 6 2.8799 -1.9094 3.4919 24 7 3.0845 -0.6258 3.2803 25 6 2.6384 -0.0183 2.1974 26 1 -0.3934 0.4418 -0.7650 27 1 1.7923 -0.5139 -0.8901 28 1 1.5615 2.4678 1.2085 29 1 3.5346 1.7703 -0.0322 30 1 1.1387 -2.6257 0.6673 31 1 2.9076 -4.1737 4.5736 32 1 3.2385 -8.0338 3.7605 33 1 4.1937 -6.5502 3.3270 34 1 5.5967 -6.8115 7.4312 35 1 6.4490 -8.7857 8.6308 36 1 5.5800 -11.0249 8.0907 37 1 3.0004 -9.3138 5.1538 38 1 1.9607 -5.6981 6.3186 39 1 1.6652 -7.4333 5.8684 40 1 3.2613 -2.3712 4.3906 41 1 2.8283 1.0364 2.0638 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705206_13287814.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:54:34 Heat of formation + Delta-G solvation = 22.462184 kcal Electronic energy + Delta-G solvation = -26032.758654 eV Core-core repulsion = 22098.947610 eV Total energy + Delta-G solvation = -3933.811044 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.092 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -42.09574 -41.40718 -40.20025 -38.90872 -37.94393 -37.37319 -34.91616 -33.90552 -33.18575 -31.78939 -31.72872 -27.37669 -26.91426 -26.88612 -25.47520 -23.89059 -23.70879 -22.73394 -21.80042 -20.37922 -19.13234 -18.63197 -18.46279 -18.05556 -17.86275 -17.03417 -16.58122 -16.49939 -16.25340 -16.13279 -15.53922 -15.38939 -15.27985 -14.96122 -14.81464 -14.64535 -14.52385 -14.32199 -14.24009 -13.88947 -13.67567 -13.62965 -13.07244 -12.68862 -12.66005 -12.49810 -12.22325 -12.19045 -11.88845 -11.78918 -11.40467 -11.35572 -11.07977 -10.76535 -10.55318 -10.31979 -10.20574 -9.91978 -9.68031 -5.13420 -0.64643 -0.06770 0.10269 0.18465 1.08469 1.14915 1.49954 1.64609 1.78368 1.84183 2.50758 2.54500 2.92139 3.14283 3.26346 3.43976 3.45725 3.50487 3.58137 3.62813 3.69928 3.71620 3.79771 3.92970 3.98805 4.05052 4.12374 4.16757 4.31544 4.34697 4.45654 4.55508 4.57956 4.65989 4.76663 4.80239 4.83351 4.84555 4.87489 4.96041 5.17842 5.21724 5.26823 5.37930 5.47731 5.73037 6.24933 6.45686 6.55124 6.99966 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.070 4.070 3 Si 0.686 3.314 4 C -0.132 4.132 5 C 0.015 3.985 6 C -0.187 4.187 7 C 0.570 3.430 8 O -0.524 6.524 9 N -0.708 5.708 10 C 0.119 3.881 11 H 0.110 0.890 12 C -0.144 4.144 13 C -0.074 4.074 14 H 0.101 0.899 15 C -0.059 4.059 16 C -0.112 4.112 17 C -0.104 4.104 18 C -0.115 4.115 19 C -0.031 4.031 20 Cl -0.068 7.068 21 C -0.109 4.109 22 C -0.135 4.135 23 C 0.139 3.861 24 N -0.477 5.477 25 C 0.124 3.876 26 H 0.387 0.613 27 H 0.081 0.919 28 H -0.246 1.246 29 H -0.250 1.250 30 H 0.154 0.846 31 H 0.401 0.599 32 H 0.098 0.902 33 H 0.077 0.923 34 H 0.128 0.872 35 H 0.133 0.867 36 H 0.133 0.867 37 H 0.134 0.866 38 H 0.080 0.920 39 H 0.101 0.899 40 H 0.163 0.837 41 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.478 3.467 -0.745 3.842 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.181 4.181 3 Si 0.586 3.414 4 C -0.134 4.134 5 C -0.011 4.011 6 C -0.192 4.192 7 C 0.356 3.644 8 O -0.400 6.400 9 N -0.360 5.360 10 C 0.014 3.986 11 H 0.128 0.872 12 C -0.183 4.183 13 C -0.093 4.093 14 H 0.119 0.881 15 C -0.060 4.060 16 C -0.130 4.130 17 C -0.122 4.122 18 C -0.133 4.133 19 C -0.058 4.058 20 Cl -0.039 7.039 21 C -0.127 4.127 22 C -0.173 4.173 23 C -0.020 4.020 24 N -0.184 5.184 25 C -0.032 4.032 26 H 0.235 0.765 27 H 0.099 0.901 28 H -0.170 1.170 29 H -0.174 1.174 30 H 0.172 0.828 31 H 0.237 0.763 32 H 0.116 0.884 33 H 0.096 0.904 34 H 0.146 0.854 35 H 0.151 0.849 36 H 0.151 0.849 37 H 0.152 0.848 38 H 0.098 0.902 39 H 0.119 0.881 40 H 0.180 0.820 41 H 0.172 0.828 Dipole moment (debyes) X Y Z Total from point charges 2.011 3.607 0.240 4.136 hybrid contribution -0.101 -0.988 -0.061 0.995 sum 1.910 2.619 0.179 3.246 Atomic orbital electron populations 1.86491 1.16701 1.81960 1.49960 1.24608 0.86210 1.10713 0.96570 0.94862 0.81010 0.77703 0.87778 1.20413 1.00950 0.94722 0.97358 1.21623 0.91296 0.93154 0.95025 1.21014 1.04794 0.95061 0.98366 1.17951 0.78688 0.86221 0.81528 1.90823 1.40032 1.64445 1.44689 1.45548 1.57680 1.10118 1.22606 1.21896 0.99396 0.80105 0.97181 0.87230 1.23590 0.98076 1.01221 0.95371 1.21638 0.96330 0.95927 0.95375 0.88053 1.19614 0.96232 0.93707 0.96405 1.21188 0.96729 0.99256 0.95822 1.21162 0.99652 0.91744 0.99629 1.21122 0.96477 0.98643 0.97095 1.20949 0.98835 0.86734 0.99271 1.98398 1.86784 1.25101 1.93644 1.20906 1.00821 0.90715 1.00282 1.23450 0.95215 1.03072 0.95596 1.23025 0.92286 0.89415 0.97289 1.67711 1.19617 1.10623 1.20475 1.22734 0.92405 0.99572 0.88514 0.76504 0.90079 1.17008 1.17429 0.82786 0.76345 0.88400 0.90422 0.85376 0.84915 0.84880 0.84798 0.90169 0.88056 0.82033 0.82829 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.34 12.82 -35.23 -0.45 -0.11 16 2 C -0.07 0.08 2.81 36.01 0.10 0.18 16 3 Si 0.69 -1.58 29.88 -169.99 -5.08 -6.66 16 4 C -0.13 -0.20 5.39 -104.54 -0.56 -0.76 16 5 C 0.02 0.03 9.38 -38.87 -0.36 -0.33 16 6 C -0.19 -0.27 5.89 -104.82 -0.62 -0.89 16 7 C 0.57 1.11 7.78 -12.33 -0.10 1.01 16 8 O -0.52 -2.93 16.02 5.32 0.09 -2.85 16 9 N -0.71 0.86 5.22 -53.96 -0.28 0.58 16 10 C 0.12 -0.14 4.32 -67.11 -0.29 -0.44 16 11 H 0.11 0.05 7.46 -51.93 -0.39 -0.33 16 12 C -0.14 0.23 7.25 -25.92 -0.19 0.05 16 13 C -0.07 0.19 3.86 -90.95 -0.35 -0.16 16 14 H 0.10 -0.38 8.09 -51.93 -0.42 -0.80 16 15 C -0.06 0.06 5.29 -104.63 -0.55 -0.50 16 16 C -0.11 0.12 9.71 -39.58 -0.38 -0.26 16 17 C -0.10 0.08 10.05 -39.59 -0.40 -0.31 16 18 C -0.11 -0.02 9.83 -39.55 -0.39 -0.41 16 19 C -0.03 -0.03 6.32 -39.50 -0.25 -0.28 16 20 Cl -0.07 -0.10 28.96 -51.86 -1.50 -1.60 16 21 C -0.11 0.00 8.38 -39.55 -0.33 -0.33 16 22 C -0.14 0.36 7.29 -25.92 -0.19 0.17 16 23 C 0.14 0.05 10.71 -17.13 -0.18 -0.13 16 24 N -0.48 -1.17 10.35 -12.91 -0.13 -1.30 16 25 C 0.12 0.26 9.84 -17.47 -0.17 0.09 16 26 H 0.39 -2.20 8.74 45.56 0.40 -1.81 16 27 H 0.08 -0.23 7.96 -51.92 -0.41 -0.64 16 28 H -0.25 -0.16 7.05 56.52 0.40 0.24 16 29 H -0.25 0.00 7.11 56.52 0.40 0.40 16 30 H 0.15 0.32 7.74 -52.49 -0.41 -0.09 16 31 H 0.40 -1.55 6.77 -40.82 -0.28 -1.83 16 32 H 0.10 -0.16 6.32 -51.93 -0.33 -0.49 16 33 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 34 H 0.13 -0.38 8.05 -52.49 -0.42 -0.80 16 35 H 0.13 -0.36 8.06 -52.48 -0.42 -0.78 16 36 H 0.13 -0.12 8.06 -52.49 -0.42 -0.55 16 37 H 0.13 -0.13 6.67 -52.49 -0.35 -0.48 16 38 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 39 H 0.10 -0.25 7.71 -51.93 -0.40 -0.66 16 40 H 0.16 -0.53 6.42 -52.49 -0.34 -0.87 16 41 H 0.16 0.16 4.87 -52.49 -0.26 -0.10 16 LS Contribution 360.71 15.07 5.44 5.44 Total: 0.00 -8.92 360.71 -11.64 -20.56 By element: Atomic # 1 Polarization: -6.25 SS G_CDS: -4.49 Total: -10.74 kcal Atomic # 6 Polarization: 1.92 SS G_CDS: -5.22 Total: -3.30 kcal Atomic # 7 Polarization: -0.31 SS G_CDS: -0.42 Total: -0.72 kcal Atomic # 8 Polarization: -2.59 SS G_CDS: -0.37 Total: -2.96 kcal Atomic # 14 Polarization: -1.58 SS G_CDS: -5.08 Total: -6.66 kcal Atomic # 17 Polarization: -0.10 SS G_CDS: -1.50 Total: -1.60 kcal Total LS contribution 5.44 Total: 5.44 kcal Total: -8.92 -11.64 -20.56 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705206_13287814.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 43.022 kcal (2) G-P(sol) polarization free energy of solvation -8.924 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 34.098 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.636 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.559 kcal (6) G-S(sol) free energy of system = (1) + (5) 22.462 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds