Wall clock time and date at job start Tue Mar 9 2021 12:55:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86300 * 109.46815 * 2 1 4 4 C 1.50701 * 109.47139 * 239.99985 * 2 1 3 5 5 C 1.34178 * 125.43769 * 299.99618 * 4 2 1 6 6 C 1.47017 * 105.95666 * 179.97438 * 5 4 2 7 7 C 1.47378 * 127.19328 * 180.02562 * 6 5 4 8 8 O 1.21608 * 119.99990 * 0.02562 * 7 6 5 9 9 N 1.34777 * 119.99876 * 179.97438 * 7 6 5 10 10 C 1.46495 * 120.00153 * 180.02562 * 9 7 6 11 11 H 1.09000 * 112.85023 * 336.20019 * 10 9 7 12 12 C 1.53784 * 113.61370 * 107.50619 * 10 9 7 13 13 C 1.53774 * 87.08108 * 89.11790 * 12 10 9 14 14 H 1.09002 * 113.61862 * 270.88501 * 13 12 10 15 15 C 1.50700 * 113.69082 * 139.98821 * 13 12 10 16 16 C 1.38222 * 119.99004 * 142.46198 * 15 13 12 17 17 C 1.38266 * 120.02410 * 179.97438 * 16 15 13 18 18 C 1.38192 * 120.01595 * 0.05072 * 17 16 15 19 19 C 1.38374 * 119.98487 * 359.97354 * 18 17 16 20 20 Cl 1.73598 * 120.01373 * 180.02562 * 19 18 17 21 21 C 1.38235 * 119.99809 * 322.19485 * 15 13 12 22 22 C 1.53782 * 87.08405 * 25.43273 * 13 12 10 23 23 C 1.36423 * 105.61253 * 0.02562 * 6 5 4 24 24 O 1.33652 * 108.39919 * 0.24125 * 23 6 5 25 25 H 0.96702 * 114.00126 * 60.00211 * 1 2 3 26 26 H 1.09004 * 109.46938 * 119.99748 * 2 1 3 27 27 H 1.48499 * 110.00157 * 60.00177 * 3 2 1 28 28 H 1.48504 * 109.99677 * 181.31950 * 3 2 1 29 29 H 1.08002 * 127.02088 * 359.97438 * 5 4 2 30 30 H 0.97009 * 119.99950 * 0.02562 * 9 7 6 31 31 H 1.08996 * 113.61218 * 203.66653 * 12 10 9 32 32 H 1.08993 * 113.61249 * 334.56994 * 12 10 9 33 33 H 1.07998 * 119.99218 * 359.97438 * 16 15 13 34 34 H 1.08003 * 119.99365 * 180.02562 * 17 16 15 35 35 H 1.08000 * 120.01005 * 179.97438 * 18 17 16 36 36 H 1.08006 * 119.99999 * 0.02562 * 21 15 13 37 37 H 1.08997 * 113.61674 * 220.02270 * 22 13 12 38 38 H 1.09003 * 113.61593 * 89.11271 * 22 13 12 39 39 H 1.08002 * 125.79741 * 179.97438 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.6754 -1.9882 -1.5501 6 6 2.3680 -2.2328 -2.8236 7 6 2.3962 -3.4878 -3.5957 8 8 1.7999 -4.4661 -3.1879 9 7 3.0820 -3.5510 -4.7542 10 6 3.1096 -4.7984 -5.5220 11 1 2.9186 -5.6780 -4.9073 12 6 2.2680 -4.7488 -6.8082 13 6 3.5265 -4.2219 -7.5176 14 1 3.6201 -3.1362 -7.4920 15 6 3.7284 -4.7943 -8.8970 16 6 4.2242 -3.9959 -9.9106 17 6 4.4102 -4.5204 -11.1763 18 6 4.0995 -5.8430 -11.4290 19 6 3.6027 -6.6426 -10.4148 20 17 3.2128 -8.3044 -10.7313 21 6 3.4230 -6.1190 -9.1471 22 6 4.3440 -4.9365 -6.4286 23 6 2.9791 -1.0552 -3.1413 24 8 2.7108 -0.1676 -2.1787 25 1 -0.3933 0.4417 -0.7651 26 1 1.7923 -0.5138 0.8900 27 1 1.5614 2.4679 1.2085 28 1 3.5345 1.7703 -0.0321 29 1 1.0818 -2.6930 -0.9868 30 1 3.5573 -2.7705 -5.0797 31 1 1.9478 -5.7300 -7.1585 32 1 1.4536 -4.0255 -6.7694 33 1 4.4664 -2.9619 -9.7139 34 1 4.7980 -3.8962 -11.9678 35 1 4.2444 -6.2525 -12.4178 36 1 3.0393 -6.7438 -8.3540 37 1 5.2054 -4.3648 -6.0834 38 1 4.5913 -5.9691 -6.6752 39 1 3.5812 -0.8726 -4.0191 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705206_13456056.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:55:03 Heat of formation + Delta-G solvation = 0.666486 kcal Electronic energy + Delta-G solvation = -24754.499336 eV Core-core repulsion = 20850.250638 eV Total energy + Delta-G solvation = -3904.248698 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 334.080 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -43.71593 -41.57640 -40.29088 -38.84892 -38.00506 -37.38629 -34.83780 -33.80277 -32.10845 -31.68891 -31.36282 -26.98257 -26.71805 -26.30219 -24.85863 -23.62952 -22.58533 -22.31203 -21.11616 -20.23304 -19.28730 -18.30488 -17.76253 -17.50164 -17.38413 -16.95700 -16.55127 -16.36916 -16.08415 -16.02846 -15.63606 -15.28311 -15.12480 -14.67957 -14.65893 -14.34821 -14.24301 -14.02499 -13.64359 -13.55978 -13.48100 -12.96096 -12.81569 -12.57385 -12.45588 -12.21091 -12.13330 -11.81783 -11.65521 -11.26966 -11.21300 -10.96659 -10.63757 -10.18478 -9.83814 -9.76664 -9.60159 -4.97322 0.18541 0.26416 0.28412 0.81409 1.15600 1.19526 1.51798 1.82770 1.94596 2.00268 2.22533 2.61588 3.30371 3.43311 3.49039 3.60253 3.63861 3.69167 3.86348 3.95428 3.98343 4.07508 4.25406 4.27748 4.31430 4.38931 4.44760 4.51323 4.60393 4.71949 4.75565 4.83955 4.89939 4.96590 4.99200 5.01662 5.12554 5.13110 5.27488 5.39150 5.49733 5.62488 5.83970 5.87062 6.46536 6.63449 7.14353 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.038 4.038 3 Si 0.801 3.199 4 C -0.052 4.052 5 C -0.153 4.153 6 C -0.270 4.270 7 C 0.589 3.411 8 O -0.587 6.587 9 N -0.690 5.690 10 C 0.114 3.886 11 H 0.080 0.920 12 C -0.145 4.145 13 C -0.060 4.060 14 H 0.128 0.872 15 C -0.062 4.062 16 C -0.111 4.111 17 C -0.108 4.108 18 C -0.128 4.128 19 C -0.050 4.050 20 Cl -0.085 7.085 21 C -0.119 4.119 22 C -0.124 4.124 23 C 0.069 3.931 24 O -0.163 6.163 25 H 0.400 0.600 26 H 0.128 0.872 27 H -0.287 1.287 28 H -0.286 1.286 29 H 0.141 0.859 30 H 0.418 0.582 31 H 0.089 0.911 32 H 0.072 0.928 33 H 0.155 0.845 34 H 0.153 0.847 35 H 0.137 0.863 36 H 0.133 0.867 37 H 0.096 0.904 38 H 0.095 0.905 39 H 0.266 0.734 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.945 8.430 -4.855 10.498 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.354 6.354 2 C -0.147 4.147 3 Si 0.704 3.296 4 C -0.100 4.100 5 C -0.173 4.173 6 C -0.274 4.274 7 C 0.378 3.622 8 O -0.468 6.468 9 N -0.342 5.342 10 C 0.009 3.991 11 H 0.098 0.902 12 C -0.184 4.184 13 C -0.078 4.078 14 H 0.146 0.854 15 C -0.063 4.063 16 C -0.129 4.129 17 C -0.126 4.126 18 C -0.147 4.147 19 C -0.076 4.076 20 Cl -0.056 7.056 21 C -0.138 4.138 22 C -0.162 4.162 23 C -0.001 4.001 24 O -0.059 6.059 25 H 0.251 0.749 26 H 0.146 0.854 27 H -0.213 1.213 28 H -0.213 1.213 29 H 0.159 0.841 30 H 0.256 0.744 31 H 0.108 0.892 32 H 0.091 0.909 33 H 0.173 0.827 34 H 0.171 0.829 35 H 0.155 0.845 36 H 0.151 0.849 37 H 0.115 0.885 38 H 0.113 0.887 39 H 0.282 0.718 Dipole moment (debyes) X Y Z Total from point charges 4.139 8.152 -3.609 9.829 hybrid contribution -0.125 -1.495 0.019 1.501 sum 4.014 6.657 -3.590 8.563 Atomic orbital electron populations 1.86545 1.16246 1.82260 1.50340 1.24682 0.85309 1.12307 0.92421 0.93181 0.77815 0.73654 0.84951 1.22750 0.99413 0.93611 0.94245 1.22547 1.02326 0.96084 0.96381 1.21436 1.10163 0.95836 0.99981 1.17530 0.77811 0.86434 0.80427 1.90796 1.46379 1.38879 1.70760 1.45279 1.52325 1.15008 1.21553 1.21842 0.98248 0.87282 0.91756 0.90206 1.23557 0.97203 1.02564 0.95054 1.21643 0.96100 1.01215 0.88859 0.85442 1.19810 0.97840 0.92407 0.96212 1.21524 0.97947 1.01243 0.92161 1.21461 0.98659 0.94257 0.98224 1.21311 0.99717 0.94645 0.99006 1.21127 1.04335 0.85953 0.96199 1.98384 1.92870 1.18380 1.95948 1.21038 1.01309 0.96284 0.95174 1.23377 0.96547 1.02587 0.93711 1.25355 0.97039 0.85157 0.92547 1.83718 1.53986 1.40295 1.27858 0.74886 0.85441 1.21344 1.21276 0.84109 0.74356 0.89249 0.90947 0.82721 0.82944 0.84525 0.84891 0.88549 0.88701 0.71823 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.48 12.86 -148.98 -1.92 -1.44 16 2 C -0.04 0.07 2.97 71.24 0.21 0.28 16 3 Si 0.80 -3.35 32.09 68.60 2.20 -1.15 16 4 C -0.05 0.00 6.20 24.76 0.15 0.16 16 5 C -0.15 -0.73 10.88 23.65 0.26 -0.47 16 6 C -0.27 -0.35 6.31 -18.99 -0.12 -0.47 16 7 C 0.59 2.92 7.81 86.65 0.68 3.60 16 8 O -0.59 -9.35 16.58 -4.06 -0.07 -9.42 16 9 N -0.69 2.76 5.25 -443.35 -2.33 0.43 16 10 C 0.11 -0.26 4.32 45.52 0.20 -0.07 16 11 H 0.08 0.31 7.46 -2.39 -0.02 0.29 16 12 C -0.15 0.50 7.26 31.12 0.23 0.72 16 13 C -0.06 0.46 3.85 -11.02 -0.04 0.42 16 14 H 0.13 -1.62 8.09 -2.39 -0.02 -1.64 16 15 C -0.06 0.24 5.29 -19.87 -0.11 0.13 16 16 C -0.11 0.59 9.71 22.27 0.22 0.81 16 17 C -0.11 0.41 10.05 22.27 0.22 0.63 16 18 C -0.13 0.02 9.83 22.29 0.22 0.24 16 19 C -0.05 -0.11 6.32 22.32 0.14 0.03 16 20 Cl -0.08 -0.35 28.96 -2.72 -0.08 -0.43 16 21 C -0.12 0.01 8.38 22.29 0.19 0.20 16 22 C -0.12 0.87 7.29 31.12 0.23 1.10 16 23 C 0.07 -0.51 11.61 67.40 0.78 0.27 16 24 O -0.16 0.62 8.89 4.44 0.04 0.66 16 25 H 0.40 -3.73 8.70 -74.06 -0.64 -4.38 16 26 H 0.13 -0.16 7.96 -2.38 -0.02 -0.18 16 27 H -0.29 -0.65 7.11 99.48 0.71 0.06 16 28 H -0.29 -0.40 7.11 99.48 0.71 0.31 16 29 H 0.14 1.15 8.06 -2.91 -0.02 1.12 16 30 H 0.42 -5.30 7.67 -92.70 -0.71 -6.01 16 31 H 0.09 -0.17 6.33 -2.39 -0.02 -0.18 16 32 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 33 H 0.16 -1.69 8.05 -2.91 -0.02 -1.71 16 34 H 0.15 -1.26 8.06 -2.91 -0.02 -1.28 16 35 H 0.14 -0.25 8.06 -2.91 -0.02 -0.28 16 36 H 0.13 -0.11 6.68 -2.91 -0.02 -0.12 16 37 H 0.10 -0.96 8.14 -2.39 -0.02 -0.98 16 38 H 0.09 -0.51 7.71 -2.39 -0.02 -0.53 16 39 H 0.27 -5.13 7.47 -2.91 -0.02 -5.15 16 Total: 0.00 -25.70 353.54 1.10 -24.60 By element: Atomic # 1 Polarization: -20.63 SS G_CDS: -0.20 Total: -20.84 kcal Atomic # 6 Polarization: 4.12 SS G_CDS: 3.45 Total: 7.57 kcal Atomic # 7 Polarization: 2.76 SS G_CDS: -2.33 Total: 0.43 kcal Atomic # 8 Polarization: -8.25 SS G_CDS: -1.94 Total: -10.19 kcal Atomic # 14 Polarization: -3.35 SS G_CDS: 2.20 Total: -1.15 kcal Atomic # 17 Polarization: -0.35 SS G_CDS: -0.08 Total: -0.43 kcal Total: -25.70 1.10 -24.60 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705206_13456056.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 25.269 kcal (2) G-P(sol) polarization free energy of solvation -25.698 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -0.429 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.095 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.603 kcal (6) G-S(sol) free energy of system = (1) + (5) 0.666 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds