Wall clock time and date at job start Tue Mar 9 2021 12:55:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86299 * 109.47004 * 2 1 4 4 C 1.50706 * 109.47147 * 119.99485 * 2 1 3 5 5 C 1.34842 * 125.89233 * 245.02719 * 4 2 1 6 6 C 1.40890 * 107.41687 * 179.97438 * 5 4 2 7 7 C 1.34843 * 107.41713 * 0.02562 * 6 5 4 8 8 C 1.50709 * 125.88988 * 180.02562 * 7 6 5 9 9 C 1.50696 * 109.47071 * 84.97789 * 8 7 6 10 10 O 1.21283 * 119.99726 * 0.02562 * 9 8 7 11 11 N 1.34771 * 120.00166 * 179.97438 * 9 8 7 12 12 C 1.46501 * 120.00458 * 179.97438 * 11 9 8 13 13 H 1.09002 * 112.84691 * 334.67154 * 12 11 9 14 14 C 1.53785 * 113.61407 * 105.86305 * 12 11 9 15 15 C 1.54049 * 86.98237 * 89.16618 * 14 12 11 16 16 H 1.08998 * 113.68866 * 270.87156 * 15 14 12 17 17 C 1.50703 * 113.61783 * 139.98117 * 15 14 12 18 18 C 1.38217 * 119.98950 * 322.22565 * 17 15 14 19 19 C 1.38269 * 120.02127 * 179.77029 * 18 17 15 20 20 C 1.38187 * 120.01356 * 0.50653 * 19 18 17 21 21 C 1.38376 * 119.98999 * 359.74384 * 20 19 18 22 22 Cl 1.73600 * 120.01557 * 179.97438 * 21 20 19 23 23 C 1.38237 * 119.99224 * 142.50317 * 17 15 14 24 24 C 1.53776 * 87.07881 * 25.43160 * 15 14 12 25 25 N 1.36338 * 108.21983 * 359.73821 * 7 6 5 26 26 H 0.96695 * 114.00385 * 299.99841 * 1 2 3 27 27 H 1.09000 * 109.47736 * 240.00116 * 2 1 3 28 28 H 1.48504 * 109.99999 * 299.99533 * 3 2 1 29 29 H 1.48501 * 110.00135 * 61.31516 * 3 2 1 30 30 H 1.08004 * 126.29253 * 0.02562 * 5 4 2 31 31 H 1.08000 * 126.29310 * 179.97438 * 6 5 4 32 32 H 1.09006 * 109.46777 * 204.97266 * 8 7 6 33 33 H 1.08999 * 109.47002 * 324.97709 * 8 7 6 34 34 H 0.96999 * 119.99947 * 0.02562 * 11 9 8 35 35 H 1.08998 * 113.61436 * 203.67092 * 14 12 11 36 36 H 1.09004 * 113.61419 * 334.57050 * 14 12 11 37 37 H 1.07995 * 119.99180 * 0.02562 * 18 17 15 38 38 H 1.08006 * 119.99082 * 180.25393 * 19 18 17 39 39 H 1.08006 * 120.00652 * 179.77087 * 20 19 18 40 40 H 1.07993 * 120.00760 * 359.95124 * 23 17 15 41 41 H 1.09012 * 113.61214 * 220.02216 * 24 15 14 42 42 H 1.08999 * 113.69217 * 89.13527 * 24 15 14 43 43 H 0.97004 * 125.64061 * 180.26799 * 25 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 1.2306 5 6 2.6296 -0.1484 2.2380 6 6 2.8968 -1.1601 3.1815 7 6 2.3521 -2.3017 2.7144 8 6 2.3921 -3.6441 3.3982 9 6 1.2597 -3.7376 4.3881 10 8 0.4951 -2.8061 4.5245 11 7 1.0960 -4.8567 5.1210 12 6 -0.0045 -4.9474 6.0837 13 1 -0.3349 -3.9724 6.4420 14 6 -1.1556 -5.8555 5.6197 15 6 -0.4011 -7.0181 6.2921 16 1 0.3096 -7.5179 5.6338 17 6 -1.3023 -7.9821 7.0199 18 6 -2.4004 -7.5111 7.7146 19 6 -3.2304 -8.3954 8.3786 20 6 -2.9564 -9.7497 8.3568 21 6 -1.8542 -10.2213 7.6658 22 17 -1.5091 -11.9225 7.6385 23 6 -1.0272 -9.3367 6.9973 24 6 0.2437 -5.9655 7.2091 25 7 1.7533 -2.0308 1.5199 26 1 -0.3934 0.4416 0.7650 27 1 1.7924 -0.5138 -0.8900 28 1 1.5615 2.4679 -1.2086 29 1 1.5877 2.4586 1.2242 30 1 2.9284 0.8870 2.3090 31 1 3.4391 -1.0430 4.1081 32 1 2.2903 -4.4341 2.6540 33 1 3.3419 -3.7575 3.9208 34 1 1.7073 -5.6018 5.0116 35 1 -2.1110 -5.6246 6.0908 36 1 -1.2285 -5.9490 4.5362 37 1 -2.6126 -6.4524 7.7353 38 1 -4.0907 -8.0272 8.9179 39 1 -3.6027 -10.4400 8.8786 40 1 -0.1670 -9.7042 6.4576 41 1 1.2999 -6.1478 7.4079 42 1 -0.3287 -5.7639 8.1145 43 1 1.2806 -2.6719 0.9662 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705206_14644196.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:55:09 Heat of formation + Delta-G solvation = 22.925808 kcal Electronic energy + Delta-G solvation = -26402.520447 eV Core-core repulsion = 22441.418029 eV Total energy + Delta-G solvation = -3961.102418 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 347.108 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -42.34186 -41.52300 -40.29828 -38.88617 -37.85262 -37.37818 -34.59129 -33.09041 -32.03317 -31.91514 -31.43130 -29.37103 -26.71406 -26.34863 -25.12862 -23.75265 -22.78479 -22.08160 -21.35490 -21.00769 -20.16467 -19.01255 -18.49752 -17.89568 -17.29218 -16.86277 -16.50405 -16.40535 -16.34753 -16.27035 -15.50419 -15.38761 -15.17263 -14.81159 -14.65918 -14.61069 -14.43315 -14.13888 -14.07507 -13.84970 -13.69451 -13.47872 -13.44220 -12.90400 -12.78479 -12.57401 -12.44161 -12.27402 -12.18431 -11.85212 -11.73483 -11.65057 -11.24368 -10.99705 -10.82283 -10.07897 -9.87353 -9.79267 -9.62119 -8.96765 -4.88090 0.14152 0.26399 1.09139 1.13277 1.29935 1.60882 1.67383 1.84454 1.94343 2.29684 2.51263 2.58117 3.37740 3.44659 3.61402 3.67425 3.70106 3.81582 3.86569 3.94270 4.04599 4.11085 4.12009 4.22828 4.27394 4.42223 4.42639 4.51085 4.62618 4.65355 4.68833 4.75620 4.81119 4.85762 4.93415 4.98769 5.00138 5.15062 5.24428 5.26105 5.29744 5.36587 5.49389 5.65067 5.82531 5.99150 6.13674 6.38268 6.53052 6.68095 7.26943 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.554 6.554 2 C -0.063 4.063 3 Si 0.799 3.201 4 C -0.018 4.018 5 C -0.202 4.202 6 C -0.200 4.200 7 C 0.034 3.966 8 C -0.067 4.067 9 C 0.513 3.487 10 O -0.577 6.577 11 N -0.701 5.701 12 C 0.117 3.883 13 H 0.080 0.920 14 C -0.143 4.143 15 C -0.064 4.064 16 H 0.114 0.886 17 C -0.061 4.061 18 C -0.118 4.118 19 C -0.108 4.108 20 C -0.128 4.128 21 C -0.048 4.048 22 Cl -0.081 7.081 23 C -0.116 4.116 24 C -0.123 4.123 25 N -0.537 5.537 26 H 0.385 0.615 27 H 0.127 0.873 28 H -0.297 1.297 29 H -0.291 1.291 30 H 0.148 0.852 31 H 0.141 0.859 32 H 0.129 0.871 33 H 0.146 0.854 34 H 0.418 0.582 35 H 0.095 0.905 36 H 0.066 0.934 37 H 0.143 0.857 38 H 0.150 0.850 39 H 0.138 0.862 40 H 0.141 0.859 41 H 0.091 0.909 42 H 0.099 0.901 43 H 0.419 0.581 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.609 -2.814 0.626 5.436 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.362 6.362 2 C -0.171 4.171 3 Si 0.703 3.297 4 C -0.131 4.131 5 C -0.227 4.227 6 C -0.224 4.224 7 C -0.080 4.080 8 C -0.107 4.107 9 C 0.300 3.700 10 O -0.456 6.456 11 N -0.353 5.353 12 C 0.011 3.989 13 H 0.099 0.901 14 C -0.181 4.181 15 C -0.082 4.082 16 H 0.132 0.868 17 C -0.061 4.061 18 C -0.136 4.136 19 C -0.126 4.126 20 C -0.146 4.146 21 C -0.074 4.074 22 Cl -0.052 7.052 23 C -0.135 4.135 24 C -0.161 4.161 25 N -0.132 5.132 26 H 0.235 0.765 27 H 0.145 0.855 28 H -0.224 1.224 29 H -0.218 1.218 30 H 0.166 0.834 31 H 0.159 0.841 32 H 0.147 0.853 33 H 0.164 0.836 34 H 0.256 0.744 35 H 0.113 0.887 36 H 0.085 0.915 37 H 0.161 0.839 38 H 0.167 0.833 39 H 0.156 0.844 40 H 0.159 0.841 41 H 0.109 0.891 42 H 0.118 0.882 43 H 0.256 0.744 Dipole moment (debyes) X Y Z Total from point charges 3.903 -1.907 0.079 4.345 hybrid contribution -1.387 -1.069 0.389 1.793 sum 2.517 -2.976 0.468 3.925 Atomic orbital electron populations 1.86534 1.18941 1.80588 1.50168 1.24999 0.83051 1.12299 0.96748 0.93419 0.90054 0.70216 0.76056 1.20889 1.07185 0.84865 1.00180 1.20911 1.05948 1.00225 0.95644 1.20846 1.07846 0.92350 1.01395 1.19932 1.02411 0.96971 0.88680 1.20266 0.99275 0.93660 0.97502 1.21058 0.85838 0.81681 0.81408 1.90758 1.47350 1.39314 1.68188 1.45559 1.31579 1.17993 1.40180 1.21780 0.87939 0.98952 0.90263 0.90129 1.23600 0.98374 0.95054 1.01084 1.21656 0.96731 0.92651 0.97202 0.86756 1.19814 0.96025 0.92871 0.97428 1.21394 0.94365 1.01073 0.96727 1.21410 1.00219 0.92074 0.98905 1.21299 0.96606 0.97043 0.99673 1.21141 0.98613 0.84936 1.02732 1.98384 1.94880 1.14296 1.97621 1.21135 0.99914 0.92499 0.99913 1.23359 1.02848 0.93132 0.96779 1.41893 1.43599 1.09290 1.18414 0.76536 0.85531 1.22449 1.21785 0.83412 0.84125 0.85258 0.83630 0.74384 0.88675 0.91504 0.83888 0.83251 0.84408 0.84072 0.89070 0.88209 0.74377 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -2.78 12.88 -148.98 -1.92 -4.70 16 2 C -0.06 -0.08 3.08 71.24 0.22 0.14 16 3 Si 0.80 -0.15 30.60 68.60 2.10 1.95 16 4 C -0.02 -0.06 6.50 41.08 0.27 0.21 16 5 C -0.20 -0.90 9.37 22.14 0.21 -0.69 16 6 C -0.20 -0.91 10.76 22.14 0.24 -0.67 16 7 C 0.03 0.06 5.66 41.08 0.23 0.29 16 8 C -0.07 0.40 6.24 29.10 0.18 0.58 16 9 C 0.51 0.09 7.82 87.66 0.69 0.78 16 10 O -0.58 -6.60 15.65 -3.04 -0.05 -6.65 16 11 N -0.70 4.06 5.26 -440.04 -2.32 1.75 16 12 C 0.12 -0.42 4.29 45.52 0.20 -0.22 16 13 H 0.08 0.16 7.50 -2.39 -0.02 0.14 16 14 C -0.14 0.59 7.27 31.21 0.23 0.82 16 15 C -0.06 0.43 3.87 -10.92 -0.04 0.39 16 16 H 0.11 -1.07 8.09 -2.39 -0.02 -1.09 16 17 C -0.06 0.17 5.29 -19.87 -0.11 0.07 16 18 C -0.12 0.34 8.60 22.27 0.19 0.54 16 19 C -0.11 0.22 10.05 22.26 0.22 0.45 16 20 C -0.13 -0.04 9.83 22.29 0.22 0.17 16 21 C -0.05 -0.08 6.32 22.33 0.14 0.06 16 22 Cl -0.08 -0.24 28.96 -2.72 -0.08 -0.32 16 23 C -0.12 0.08 9.49 22.29 0.21 0.29 16 24 C -0.12 0.89 7.28 31.12 0.23 1.12 16 25 N -0.54 -1.05 6.07 -171.12 -1.04 -2.09 16 26 H 0.39 0.53 8.70 -74.06 -0.64 -0.12 16 27 H 0.13 -0.21 7.96 -2.39 -0.02 -0.23 16 28 H -0.30 -1.83 7.11 99.48 0.71 -1.13 16 29 H -0.29 -1.54 7.11 99.48 0.71 -0.83 16 30 H 0.15 0.24 6.24 -2.91 -0.02 0.22 16 31 H 0.14 0.34 8.06 -2.91 -0.02 0.32 16 32 H 0.13 -1.50 8.14 -2.38 -0.02 -1.52 16 33 H 0.15 -1.64 8.14 -2.39 -0.02 -1.66 16 34 H 0.42 -5.26 8.70 -92.71 -0.81 -6.07 16 35 H 0.09 -0.39 6.33 -2.39 -0.02 -0.40 16 36 H 0.07 -0.15 8.14 -2.38 -0.02 -0.17 16 37 H 0.14 -0.87 6.67 -2.91 -0.02 -0.89 16 38 H 0.15 -0.91 8.06 -2.91 -0.02 -0.93 16 39 H 0.14 -0.21 8.06 -2.91 -0.02 -0.24 16 40 H 0.14 -0.48 8.05 -2.91 -0.02 -0.50 16 41 H 0.09 -0.83 8.14 -2.38 -0.02 -0.85 16 42 H 0.10 -0.69 7.72 -2.39 -0.02 -0.71 16 43 H 0.42 -0.62 8.96 -92.71 -0.83 -1.45 16 Total: 0.00 -22.91 377.06 -0.95 -23.86 By element: Atomic # 1 Polarization: -16.95 SS G_CDS: -1.17 Total: -18.12 kcal Atomic # 6 Polarization: 0.80 SS G_CDS: 3.52 Total: 4.32 kcal Atomic # 7 Polarization: 3.02 SS G_CDS: -3.36 Total: -0.34 kcal Atomic # 8 Polarization: -9.38 SS G_CDS: -1.97 Total: -11.34 kcal Atomic # 14 Polarization: -0.15 SS G_CDS: 2.10 Total: 1.95 kcal Atomic # 17 Polarization: -0.24 SS G_CDS: -0.08 Total: -0.32 kcal Total: -22.91 -0.95 -23.86 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705206_14644196.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 46.781 kcal (2) G-P(sol) polarization free energy of solvation -22.907 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 23.874 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.948 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.855 kcal (6) G-S(sol) free energy of system = (1) + (5) 22.926 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds