Wall clock time and date at job start Tue Mar 9 2021 12:57:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50694 * 1 3 3 C 1.37940 * 120.07524 * 2 1 4 4 C 1.38375 * 120.14921 * 180.02562 * 3 2 1 5 5 C 1.50704 * 119.85722 * 179.97438 * 4 3 2 6 6 C 1.38343 * 120.29129 * 0.02562 * 4 3 2 7 7 C 1.50698 * 119.92715 * 179.97438 * 6 4 3 8 8 O 1.42902 * 109.46761 * 284.99110 * 7 6 4 9 9 Si 1.86295 * 109.47109 * 164.99488 * 7 6 4 10 10 C 1.37982 * 120.14127 * 359.68826 * 6 4 3 11 11 C 1.39554 * 119.85227 * 0.58155 * 10 6 4 12 12 C 1.47846 * 120.14031 * 179.72394 * 11 10 6 13 13 O 1.21552 * 119.99747 * 173.71673 * 12 11 10 14 14 N 1.34771 * 120.00356 * 353.71778 * 12 11 10 15 15 C 1.46499 * 120.00097 * 180.02562 * 14 12 11 16 16 H 1.09000 * 112.85112 * 336.19165 * 15 14 12 17 17 C 1.53785 * 113.69064 * 107.46248 * 15 14 12 18 18 C 1.53781 * 87.08185 * 89.12909 * 17 15 14 19 19 H 1.09003 * 113.68891 * 270.87008 * 18 17 15 20 20 C 1.50697 * 113.61567 * 139.98500 * 18 17 15 21 21 C 1.38195 * 119.99578 * 142.50093 * 20 18 17 22 22 C 1.38375 * 119.98801 * 179.97438 * 21 20 18 23 23 Cl 1.73595 * 120.01326 * 179.97438 * 22 21 20 24 24 C 1.38336 * 119.97163 * 359.97438 * 22 21 20 25 25 C 1.38234 * 119.98582 * 359.97438 * 24 22 21 26 26 C 1.38223 * 120.01393 * 359.74585 * 25 24 22 27 27 C 1.53772 * 87.08329 * 25.43021 * 18 17 15 28 28 H 1.08998 * 109.47212 * 263.43783 * 1 2 3 29 29 H 1.09002 * 109.47510 * 23.43773 * 1 2 3 30 30 H 1.09001 * 109.47210 * 143.43663 * 1 2 3 31 31 H 1.08006 * 119.92676 * 0.02676 * 3 2 1 32 32 H 1.09006 * 109.46599 * 90.00602 * 5 4 3 33 33 H 1.08995 * 109.46947 * 210.00449 * 5 4 3 34 34 H 1.09000 * 109.46900 * 330.00604 * 5 4 3 35 35 H 1.08992 * 109.47290 * 44.99042 * 7 6 4 36 36 H 0.96703 * 114.00240 * 179.97438 * 8 7 6 37 37 H 1.48497 * 110.00286 * 298.67894 * 9 7 6 38 38 H 1.48500 * 109.99958 * 59.99726 * 9 7 6 39 39 H 1.08002 * 120.07222 * 180.28183 * 10 6 4 40 40 H 0.96999 * 119.99900 * 359.97438 * 14 12 11 41 41 H 1.08995 * 113.61321 * 334.57562 * 17 15 14 42 42 H 1.09005 * 113.61014 * 203.67234 * 17 15 14 43 43 H 1.07998 * 120.00474 * 359.97438 * 21 20 18 44 44 H 1.07995 * 120.00460 * 180.02562 * 24 22 21 45 45 H 1.07998 * 119.98768 * 180.02562 * 25 24 22 46 46 H 1.07994 * 119.98397 * 180.27796 * 26 25 24 47 47 H 1.09001 * 113.61452 * 89.11789 * 27 18 17 48 48 H 1.09005 * 113.61666 * 220.02202 * 27 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.1982 1.1937 0.0000 4 6 3.5820 1.1955 -0.0005 5 6 4.3305 2.5035 -0.0011 6 6 4.2813 0.0018 -0.0016 7 6 5.7882 0.0134 -0.0028 8 8 6.2608 0.3661 -1.3044 9 14 6.4225 -1.6786 0.4507 10 6 3.6020 -1.1992 0.0043 11 6 2.2065 -1.2080 -0.0008 12 6 1.4722 -2.4912 -0.0007 13 8 0.2617 -2.4987 0.1101 14 7 2.1448 -3.6526 -0.1233 15 6 1.4171 -4.9240 -0.1237 16 1 0.4505 -4.8587 0.3759 17 6 1.3528 -5.5988 -1.5041 18 6 2.6746 -6.2945 -1.1383 19 1 3.5611 -5.7245 -1.4165 20 6 2.7418 -7.7336 -1.5804 21 6 3.9309 -8.2569 -2.0514 22 6 3.9925 -9.5785 -2.4568 23 17 5.4858 -10.2363 -3.0493 24 6 2.8637 -10.3753 -2.3897 25 6 1.6750 -9.8510 -1.9173 26 6 1.6156 -8.5324 -1.5071 27 6 2.2676 -6.1207 0.3343 28 1 -0.3633 -0.1174 1.0209 29 1 -0.3634 0.9429 -0.4088 30 1 -0.3634 -0.8254 -0.6122 31 1 1.6582 2.1291 0.0004 32 1 4.5115 2.8189 1.0265 33 1 5.2831 2.3766 -0.5153 34 1 3.7383 3.2608 -0.5148 35 1 6.1466 0.7425 0.7238 36 1 7.2246 0.3936 -1.3789 37 1 5.9643 -2.0439 1.8152 38 1 5.9408 -2.6819 -0.5324 39 1 4.1491 -2.1304 0.0081 40 1 3.1107 -3.6466 -0.2120 41 1 1.4426 -4.9003 -2.3360 42 1 0.5140 -6.2859 -1.6155 43 1 4.8119 -7.6345 -2.1032 44 1 2.9113 -11.4070 -2.7055 45 1 0.7938 -10.4732 -1.8645 46 1 0.6879 -8.1246 -1.1340 47 1 1.6788 -6.9505 0.7254 48 1 3.0958 -5.8436 0.9865 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705206_9599494.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:57:00 Heat of formation + Delta-G solvation = 9.543220 kcal Electronic energy + Delta-G solvation = -30680.955898 eV Core-core repulsion = 26500.935319 eV Total energy + Delta-G solvation = -4180.020579 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.128 amu Computer time = 1.20 seconds Orbital eigenvalues (eV) -42.04431 -41.19232 -40.08970 -38.99116 -37.59633 -37.40471 -35.13848 -34.51302 -33.36564 -32.09185 -31.49985 -29.44093 -28.61730 -26.82575 -26.37353 -25.52264 -23.94177 -23.73596 -23.14745 -22.36131 -21.07705 -20.20072 -18.92365 -18.38822 -18.19262 -17.52867 -16.97862 -16.64921 -16.52545 -16.46443 -16.30986 -16.11413 -15.50796 -15.25497 -14.96812 -14.94585 -14.80359 -14.67505 -14.65312 -14.41357 -14.08050 -13.96127 -13.65969 -13.56988 -13.48903 -13.16147 -12.94571 -12.89482 -12.74018 -12.65831 -12.62582 -12.50401 -12.31455 -12.11106 -11.90565 -11.80811 -11.73936 -11.34574 -10.87530 -10.33154 -10.28949 -10.02659 -9.91569 -9.72794 -9.65656 -4.98680 -0.39150 0.02796 0.10772 0.22409 1.10072 1.25828 1.54399 1.63135 1.86235 1.90181 2.48970 2.54400 3.25752 3.29844 3.41891 3.46634 3.52665 3.58806 3.71754 3.78838 3.86482 3.87239 4.01125 4.02598 4.08501 4.11542 4.22056 4.36667 4.38312 4.44146 4.48751 4.51782 4.59378 4.61675 4.66255 4.69894 4.72164 4.77391 4.81074 4.85464 4.89435 4.90557 4.95844 5.00440 5.09095 5.20579 5.21950 5.32631 5.36726 5.39157 5.40876 5.54068 5.70605 5.78932 6.22545 6.91295 6.94628 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.026 4.026 3 C -0.135 4.135 4 C -0.030 4.030 5 C -0.124 4.124 6 C -0.107 4.107 7 C -0.073 4.073 8 O -0.558 6.558 9 Si 0.755 3.245 10 C -0.089 4.089 11 C -0.164 4.164 12 C 0.560 3.440 13 O -0.553 6.553 14 N -0.705 5.705 15 C 0.113 3.887 16 H 0.098 0.902 17 C -0.138 4.138 18 C -0.070 4.070 19 H 0.099 0.901 20 C -0.061 4.061 21 C -0.119 4.119 22 C -0.047 4.047 23 Cl -0.079 7.079 24 C -0.125 4.125 25 C -0.105 4.105 26 C -0.115 4.115 27 C -0.125 4.125 28 H 0.072 0.928 29 H 0.078 0.922 30 H 0.077 0.923 31 H 0.154 0.846 32 H 0.089 0.911 33 H 0.086 0.914 34 H 0.079 0.921 35 H 0.096 0.904 36 H 0.403 0.597 37 H -0.289 1.289 38 H -0.281 1.281 39 H 0.127 0.873 40 H 0.404 0.596 41 H 0.064 0.936 42 H 0.109 0.891 43 H 0.135 0.865 44 H 0.141 0.859 45 H 0.154 0.846 46 H 0.148 0.852 47 H 0.113 0.887 48 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.777 2.170 1.748 5.530 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.027 4.027 3 C -0.152 4.152 4 C -0.030 4.030 5 C -0.180 4.180 6 C -0.107 4.107 7 C -0.183 4.183 8 O -0.368 6.368 9 Si 0.660 3.340 10 C -0.107 4.107 11 C -0.168 4.168 12 C 0.349 3.651 13 O -0.433 6.433 14 N -0.356 5.356 15 C 0.008 3.992 16 H 0.116 0.884 17 C -0.177 4.177 18 C -0.088 4.088 19 H 0.118 0.882 20 C -0.062 4.062 21 C -0.138 4.138 22 C -0.073 4.073 23 Cl -0.050 7.050 24 C -0.144 4.144 25 C -0.123 4.123 26 C -0.133 4.133 27 C -0.162 4.162 28 H 0.091 0.909 29 H 0.097 0.903 30 H 0.096 0.904 31 H 0.171 0.829 32 H 0.108 0.892 33 H 0.104 0.896 34 H 0.098 0.902 35 H 0.114 0.886 36 H 0.255 0.745 37 H -0.216 1.216 38 H -0.208 1.208 39 H 0.144 0.856 40 H 0.240 0.760 41 H 0.083 0.917 42 H 0.127 0.873 43 H 0.153 0.847 44 H 0.159 0.841 45 H 0.172 0.828 46 H 0.165 0.835 47 H 0.131 0.869 48 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges 3.229 1.300 1.878 3.955 hybrid contribution 0.187 0.001 -0.220 0.289 sum 3.416 1.301 1.658 4.014 Atomic orbital electron populations 1.21028 0.89558 1.03474 1.03240 1.20283 0.97334 0.91738 0.93346 1.21301 0.93718 0.98136 1.02085 1.20370 0.93624 0.96150 0.92903 1.21030 1.01058 0.92145 1.03760 1.19480 0.95302 0.92527 1.03369 1.24692 0.91399 1.12586 0.89623 1.86466 1.29127 1.92790 1.28463 0.94383 0.89584 0.73771 0.76217 1.21181 0.93135 0.97990 0.98433 1.19688 0.93393 0.93383 1.10293 1.18393 0.86873 0.84207 0.75637 1.90723 1.14556 1.87395 1.50645 1.45615 1.10837 1.05207 1.73968 1.21952 0.96933 0.82138 0.98165 0.88410 1.23568 0.97879 0.99310 0.96912 1.21577 0.99032 0.91455 0.96740 0.88234 1.19720 0.92790 0.95653 0.98009 1.21098 0.99157 0.93592 0.99943 1.21119 0.88163 0.94848 1.03206 1.98382 1.33586 1.86104 1.86975 1.21327 0.91731 1.00722 1.00570 1.21435 0.97821 0.95832 0.97192 1.21397 0.98905 0.93769 0.99194 1.23418 1.00123 0.97261 0.95431 0.90895 0.90325 0.90435 0.82851 0.89242 0.89556 0.90243 0.88580 0.74528 1.21570 1.20792 0.85614 0.75984 0.91703 0.87251 0.84676 0.84119 0.82828 0.83457 0.86881 0.90075 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.74 8.74 71.23 0.62 -0.12 16 2 C -0.03 -0.18 5.91 -19.61 -0.12 -0.30 16 3 C -0.13 -0.46 9.31 22.23 0.21 -0.25 16 4 C -0.03 -0.08 5.89 -19.81 -0.12 -0.19 16 5 C -0.12 0.35 9.32 71.24 0.66 1.01 16 6 C -0.11 -0.36 5.29 -19.90 -0.11 -0.47 16 7 C -0.07 0.21 1.87 71.24 0.13 0.34 16 8 O -0.56 1.79 11.89 -148.98 -1.77 0.02 16 9 Si 0.76 -3.24 30.18 68.60 2.07 -1.17 16 10 C -0.09 -0.47 8.13 22.53 0.18 -0.29 16 11 C -0.16 -1.31 5.87 -20.09 -0.12 -1.43 16 12 C 0.56 5.04 7.70 86.79 0.67 5.71 16 13 O -0.55 -7.77 12.94 -3.88 -0.05 -7.82 16 14 N -0.71 -2.37 5.22 -442.90 -2.31 -4.68 16 15 C 0.11 0.09 4.32 45.52 0.20 0.28 16 16 H 0.10 0.35 7.46 -2.39 -0.02 0.33 16 17 C -0.14 0.13 7.26 31.12 0.23 0.36 16 18 C -0.07 0.16 3.86 -11.02 -0.04 0.12 16 19 H 0.10 -0.26 8.09 -2.39 -0.02 -0.28 16 20 C -0.06 0.03 5.29 -19.87 -0.11 -0.08 16 21 C -0.12 -0.21 9.49 22.29 0.21 0.00 16 22 C -0.05 -0.15 6.32 22.33 0.14 -0.01 16 23 Cl -0.08 -0.33 28.96 -2.72 -0.08 -0.41 16 24 C -0.12 -0.12 9.83 22.29 0.22 0.10 16 25 C -0.10 0.18 10.05 22.27 0.22 0.40 16 26 C -0.11 0.23 8.59 22.27 0.19 0.42 16 27 C -0.12 0.41 7.29 31.12 0.23 0.63 16 28 H 0.07 0.51 8.14 -2.39 -0.02 0.49 16 29 H 0.08 0.16 8.04 -2.39 -0.02 0.15 16 30 H 0.08 0.81 5.85 -2.39 -0.01 0.80 16 31 H 0.15 -0.20 8.06 -2.91 -0.02 -0.22 16 32 H 0.09 -0.48 8.14 -2.38 -0.02 -0.50 16 33 H 0.09 -0.26 6.18 -2.39 -0.01 -0.27 16 34 H 0.08 -0.32 8.08 -2.39 -0.02 -0.34 16 35 H 0.10 -0.67 7.37 -2.39 -0.02 -0.69 16 36 H 0.40 -5.44 8.74 -74.06 -0.65 -6.09 16 37 H -0.29 -0.51 7.11 99.48 0.71 0.20 16 38 H -0.28 -0.17 6.75 99.48 0.67 0.50 16 39 H 0.13 0.34 3.28 -2.91 -0.01 0.33 16 40 H 0.40 0.13 6.78 -92.71 -0.63 -0.50 16 41 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 42 H 0.11 -0.35 6.33 -2.38 -0.02 -0.37 16 43 H 0.14 0.02 8.05 -2.91 -0.02 -0.01 16 44 H 0.14 -0.18 8.06 -2.91 -0.02 -0.21 16 45 H 0.15 -0.96 8.06 -2.91 -0.02 -0.98 16 46 H 0.15 -0.87 6.68 -2.91 -0.02 -0.89 16 47 H 0.11 -0.58 7.71 -2.39 -0.02 -0.60 16 48 H 0.08 -0.29 8.14 -2.38 -0.02 -0.31 16 Total: 0.00 -18.30 398.77 1.12 -17.18 By element: Atomic # 1 Polarization: -9.12 SS G_CDS: -0.25 Total: -9.37 kcal Atomic # 6 Polarization: 2.73 SS G_CDS: 3.51 Total: 6.24 kcal Atomic # 7 Polarization: -2.37 SS G_CDS: -2.31 Total: -4.68 kcal Atomic # 8 Polarization: -5.97 SS G_CDS: -1.82 Total: -7.79 kcal Atomic # 14 Polarization: -3.24 SS G_CDS: 2.07 Total: -1.17 kcal Atomic # 17 Polarization: -0.33 SS G_CDS: -0.08 Total: -0.41 kcal Total: -18.30 1.12 -17.18 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705206_9599494.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 26.726 kcal (2) G-P(sol) polarization free energy of solvation -18.300 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.426 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.118 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.182 kcal (6) G-S(sol) free energy of system = (1) + (5) 9.543 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds