Wall clock time and date at job start Tue Mar 9 2021 12:57:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86296 * 109.46985 * 2 1 4 4 C 1.50705 * 109.46838 * 119.99854 * 2 1 3 5 5 C 1.34234 * 126.49645 * 254.97789 * 4 2 1 6 6 N 1.36837 * 109.93778 * 180.02562 * 5 4 2 7 7 C 1.46494 * 125.06638 * 179.97438 * 6 5 4 8 8 C 1.50698 * 109.47542 * 265.02330 * 7 6 5 9 9 O 1.21282 * 119.99364 * 0.02562 * 8 7 6 10 10 N 1.34774 * 120.00600 * 179.97438 * 8 7 6 11 11 C 1.46496 * 120.00099 * 180.02562 * 10 8 7 12 12 H 1.08994 * 112.91109 * 23.75176 * 11 10 8 13 13 C 1.53787 * 113.61210 * 155.00440 * 11 10 8 14 14 C 1.53778 * 87.08035 * 89.11438 * 13 11 10 15 15 H 1.09004 * 113.61682 * 270.87724 * 14 13 11 16 16 C 1.50699 * 113.61086 * 140.06661 * 14 13 11 17 17 C 1.38194 * 119.99657 * 299.71797 * 16 14 13 18 18 C 1.38371 * 119.99055 * 179.76888 * 17 16 14 19 19 Cl 1.73599 * 120.01529 * 180.23261 * 18 17 16 20 20 C 1.38329 * 119.97131 * 0.53090 * 18 17 16 21 21 C 1.38235 * 119.98599 * 359.72853 * 20 18 17 22 22 C 1.38218 * 120.01523 * 359.97438 * 21 20 18 23 23 C 1.53778 * 87.08449 * 25.43264 * 14 13 11 24 24 C 1.37694 * 109.87329 * 0.26151 * 6 5 4 25 25 C 1.39085 * 133.51434 * 179.73474 * 24 6 5 26 26 C 1.37791 * 119.77904 * 179.97438 * 25 24 6 27 27 C 1.38789 * 120.66603 * 0.02562 * 26 25 24 28 28 C 1.36673 * 120.52733 * 359.57537 * 27 26 25 29 29 C 1.39583 * 119.76038 * 0.65332 * 28 27 26 30 30 H 0.96700 * 114.00206 * 300.00344 * 1 2 3 31 31 H 1.08993 * 109.46996 * 239.99505 * 2 1 3 32 32 H 1.48498 * 109.99896 * 299.99284 * 3 2 1 33 33 H 1.48492 * 110.00346 * 61.31603 * 3 2 1 34 34 H 1.07996 * 125.03422 * 359.97263 * 5 4 2 35 35 H 1.09005 * 109.47471 * 145.02227 * 7 6 5 36 36 H 1.09008 * 109.47060 * 25.02409 * 7 6 5 37 37 H 0.97002 * 119.99411 * 0.02562 * 10 8 7 38 38 H 1.08998 * 113.61103 * 203.66698 * 13 11 10 39 39 H 1.08999 * 113.61167 * 334.56160 * 13 11 10 40 40 H 1.08002 * 120.00070 * 0.02979 * 17 16 14 41 41 H 1.07996 * 120.00715 * 179.69684 * 20 18 17 42 42 H 1.08004 * 119.99416 * 180.02562 * 21 20 18 43 43 H 1.08001 * 119.98924 * 180.02562 * 22 21 20 44 44 H 1.08993 * 113.61229 * 220.02023 * 23 14 13 45 45 H 1.09000 * 113.61263 * 89.11673 * 23 14 13 46 46 H 1.07993 * 120.11069 * 0.02562 * 25 24 6 47 47 H 1.07995 * 119.66734 * 179.97438 * 26 25 24 48 48 H 1.07998 * 119.73761 * 180.02562 * 27 26 25 49 49 H 1.08003 * 120.11302 * 179.97438 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.4611 -0.1376 2.3228 6 7 2.8034 -1.0989 3.2344 7 6 3.4091 -0.8404 4.5430 8 6 4.9073 -0.9626 4.4362 9 8 5.4188 -1.2380 3.3715 10 7 5.6789 -0.7647 5.5233 11 6 7.1354 -0.8830 5.4192 12 1 7.5028 -0.7223 4.4057 13 6 7.8965 -0.0774 6.4854 14 6 7.8057 -1.3249 7.3799 15 1 6.9054 -1.3577 7.9934 16 6 9.0613 -1.5949 8.1685 17 6 10.2545 -1.8246 7.5104 18 6 11.4082 -2.0677 8.2346 19 17 12.9087 -2.3503 7.4087 20 6 11.3642 -2.0915 9.6170 21 6 10.1689 -1.8669 10.2741 22 6 9.0181 -1.6180 9.5502 23 6 7.6998 -2.1487 6.0857 24 6 2.4998 -2.3460 2.7359 25 6 2.6416 -3.6369 3.2337 26 6 2.2315 -4.7118 2.4754 27 6 1.6777 -4.5203 1.2173 28 6 1.5215 -3.2600 0.7120 29 6 1.9347 -2.1571 1.4612 30 1 -0.3933 0.4417 0.7650 31 1 1.7923 -0.5139 -0.8899 32 1 1.5616 2.4678 -1.2086 33 1 1.5878 2.4586 1.2241 34 1 2.5978 0.9247 2.4613 35 1 3.0360 -1.5660 5.2658 36 1 3.1491 0.1661 4.8712 37 1 5.2697 -0.5441 6.3747 38 1 8.9154 0.1782 6.1945 39 1 7.3379 0.7765 6.8687 40 1 10.2874 -1.8102 6.4309 41 1 12.2633 -2.2860 10.1828 42 1 10.1344 -1.8851 11.3535 43 1 8.0845 -1.4422 10.0641 44 1 6.9824 -2.9670 6.1466 45 1 8.6650 -2.4595 5.6857 46 1 3.0710 -3.7963 4.2118 47 1 2.3428 -5.7134 2.8636 48 1 1.3609 -5.3735 0.6359 49 1 1.0902 -3.1187 -0.2680 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705206_9818708.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:57:05 Heat of formation + Delta-G solvation = 51.799555 kcal Electronic energy + Delta-G solvation = -33187.132911 eV Core-core repulsion = 28687.066513 eV Total energy + Delta-G solvation = -4500.066399 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 397.123 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -42.51866 -41.70098 -40.42336 -39.04207 -38.03486 -37.58639 -37.38636 -34.80074 -34.01069 -32.06248 -31.82361 -31.25902 -30.13541 -28.99492 -26.94535 -26.54229 -25.59347 -23.93235 -23.63318 -22.94409 -22.55580 -21.87267 -20.62630 -20.35958 -18.87247 -18.52660 -18.18855 -17.71042 -17.37055 -16.99467 -16.57607 -16.54478 -16.33654 -16.29865 -16.02023 -15.62322 -15.48213 -15.30343 -15.03881 -14.85383 -14.69852 -14.59728 -14.58092 -14.30787 -14.00542 -13.90210 -13.71810 -13.51597 -13.28498 -13.08966 -12.71789 -12.60729 -12.52178 -12.46641 -12.29256 -12.25717 -11.92148 -11.89028 -11.82510 -11.63643 -11.39982 -11.13997 -10.43763 -10.36079 -10.29192 -9.95551 -9.71454 -9.03622 -8.54641 -4.87100 0.06773 0.15051 0.26681 0.78337 1.12296 1.33824 1.37356 1.39356 1.61181 1.68976 2.02016 2.04934 2.47614 3.10078 3.21774 3.37030 3.41151 3.45103 3.53079 3.58265 3.67404 3.71753 3.76099 3.78266 3.84774 3.89222 4.00677 4.05201 4.13023 4.28295 4.30767 4.36003 4.41083 4.51376 4.53799 4.58790 4.63215 4.71592 4.75712 4.78897 4.80242 4.81832 4.89530 4.91119 4.98750 5.14832 5.22606 5.24827 5.33334 5.43636 5.63781 5.69587 5.79791 5.85317 5.89097 6.11642 6.28841 6.35167 6.58939 6.96340 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.037 4.037 3 Si 0.682 3.318 4 C -0.192 4.192 5 C 0.066 3.934 6 N -0.466 5.466 7 C 0.092 3.908 8 C 0.494 3.506 9 O -0.508 6.508 10 N -0.712 5.712 11 C 0.120 3.880 12 H 0.107 0.893 13 C -0.135 4.135 14 C -0.073 4.073 15 H 0.101 0.899 16 C -0.060 4.060 17 C -0.109 4.109 18 C -0.031 4.031 19 Cl -0.068 7.068 20 C -0.114 4.114 21 C -0.104 4.104 22 C -0.112 4.112 23 C -0.144 4.144 24 C 0.109 3.891 25 C -0.128 4.128 26 C -0.096 4.096 27 C -0.145 4.145 28 C -0.065 4.065 29 C -0.086 4.086 30 H 0.372 0.628 31 H 0.114 0.886 32 H -0.256 1.256 33 H -0.260 1.260 34 H 0.168 0.832 35 H 0.118 0.882 36 H 0.122 0.878 37 H 0.402 0.598 38 H 0.100 0.900 39 H 0.079 0.921 40 H 0.134 0.866 41 H 0.133 0.867 42 H 0.133 0.867 43 H 0.128 0.872 44 H 0.076 0.924 45 H 0.096 0.904 46 H 0.114 0.886 47 H 0.125 0.875 48 H 0.123 0.877 49 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.300 2.189 6.958 7.300 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.148 4.148 3 Si 0.583 3.417 4 C -0.200 4.200 5 C -0.059 4.059 6 N -0.149 5.149 7 C -0.035 4.035 8 C 0.278 3.722 9 O -0.381 6.381 10 N -0.365 5.365 11 C 0.015 3.985 12 H 0.125 0.875 13 C -0.173 4.173 14 C -0.091 4.091 15 H 0.119 0.881 16 C -0.060 4.060 17 C -0.127 4.127 18 C -0.058 4.058 19 Cl -0.039 7.039 20 C -0.133 4.133 21 C -0.122 4.122 22 C -0.130 4.130 23 C -0.183 4.183 24 C 0.005 3.995 25 C -0.148 4.148 26 C -0.115 4.115 27 C -0.165 4.165 28 C -0.083 4.083 29 C -0.090 4.090 30 H 0.220 0.780 31 H 0.132 0.868 32 H -0.180 1.180 33 H -0.185 1.185 34 H 0.185 0.815 35 H 0.136 0.864 36 H 0.140 0.860 37 H 0.237 0.763 38 H 0.118 0.882 39 H 0.097 0.903 40 H 0.152 0.848 41 H 0.151 0.849 42 H 0.151 0.849 43 H 0.146 0.854 44 H 0.095 0.905 45 H 0.115 0.885 46 H 0.132 0.868 47 H 0.143 0.857 48 H 0.141 0.859 49 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges 0.811 2.584 5.809 6.409 hybrid contribution -0.862 -0.158 1.238 1.517 sum -0.051 2.426 7.047 7.453 Atomic orbital electron populations 1.86607 1.18154 1.79963 1.48960 1.24284 0.83281 1.09824 0.97365 0.95021 0.91789 0.74464 0.80377 1.20585 1.09750 0.92354 0.97310 1.21578 1.00944 0.94008 0.89365 1.43200 1.52619 1.04663 1.14444 1.21579 0.90708 1.05837 0.85334 1.21011 0.89446 0.77371 0.84420 1.90823 1.74518 1.45149 1.27627 1.45622 1.06444 1.72347 1.12071 1.21859 0.79439 0.96439 1.00770 0.87454 1.23435 1.01802 0.96675 0.95347 1.21619 0.95438 0.97248 0.94840 0.88112 1.19615 0.94085 0.98779 0.93559 1.20908 0.90722 1.00600 1.00489 1.20955 0.87829 1.04102 0.92897 1.98400 1.32130 1.94570 1.78763 1.21126 0.99298 1.00571 0.92315 1.21160 0.91923 0.98674 1.00437 1.21177 0.98811 0.99648 0.93379 1.23577 1.02442 0.97343 0.94897 1.18168 1.01221 0.85810 0.94334 1.19946 1.05005 0.89241 1.00641 1.20828 0.98316 0.97935 0.94461 1.20678 1.02377 0.96940 0.96458 1.20313 0.97927 0.90902 0.99182 1.18937 1.03303 0.92774 0.93995 0.78043 0.86778 1.18020 1.18535 0.81456 0.86438 0.85975 0.76335 0.88186 0.90251 0.84822 0.84865 0.84916 0.85414 0.90543 0.88524 0.86786 0.85736 0.85915 0.85898 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.34 12.88 -35.23 -0.45 -1.80 16 2 C -0.04 -0.05 3.06 36.01 0.11 0.06 16 3 Si 0.68 -0.13 30.82 -169.99 -5.24 -5.37 16 4 C -0.19 -0.44 5.58 -102.71 -0.57 -1.01 16 5 C 0.07 0.05 9.89 -16.73 -0.17 -0.11 16 6 N -0.47 -0.43 2.27 -115.71 -0.26 -0.70 16 7 C 0.09 -0.27 6.48 -5.20 -0.03 -0.30 16 8 C 0.49 -0.39 7.90 -10.99 -0.09 -0.47 16 9 O -0.51 -2.16 16.02 5.56 0.09 -2.08 16 10 N -0.71 2.54 5.26 -53.02 -0.28 2.26 16 11 C 0.12 -0.30 4.32 -67.12 -0.29 -0.59 16 12 H 0.11 -0.03 7.47 -51.93 -0.39 -0.42 16 13 C -0.13 0.50 7.29 -25.92 -0.19 0.31 16 14 C -0.07 0.26 3.85 -90.96 -0.35 -0.09 16 15 H 0.10 -0.48 8.09 -51.93 -0.42 -0.91 16 16 C -0.06 0.10 5.29 -104.63 -0.55 -0.46 16 17 C -0.11 0.06 8.41 -39.55 -0.33 -0.27 16 18 C -0.03 -0.01 6.32 -39.50 -0.25 -0.26 16 19 Cl -0.07 -0.08 28.96 -51.86 -1.50 -1.58 16 20 C -0.11 0.03 9.83 -39.55 -0.39 -0.36 16 21 C -0.10 0.14 10.05 -39.59 -0.40 -0.26 16 22 C -0.11 0.20 9.71 -39.58 -0.38 -0.18 16 23 C -0.14 0.35 7.25 -25.92 -0.19 0.17 16 24 C 0.11 0.35 6.79 -83.98 -0.57 -0.22 16 25 C -0.13 -0.30 10.00 -39.43 -0.39 -0.69 16 26 C -0.10 -0.20 10.01 -39.54 -0.40 -0.60 16 27 C -0.15 -0.36 9.97 -39.94 -0.40 -0.76 16 28 C -0.06 -0.23 10.05 -39.65 -0.40 -0.63 16 29 C -0.09 -0.34 6.35 -105.14 -0.67 -1.01 16 30 H 0.37 -0.20 8.70 45.56 0.40 0.20 16 31 H 0.11 0.15 7.96 -51.93 -0.41 -0.26 16 32 H -0.26 -0.76 7.11 56.52 0.40 -0.36 16 33 H -0.26 -0.16 7.00 56.52 0.40 0.23 16 34 H 0.17 -0.32 6.27 -52.49 -0.33 -0.64 16 35 H 0.12 -0.59 8.14 -51.93 -0.42 -1.01 16 36 H 0.12 -0.75 8.12 -51.92 -0.42 -1.17 16 37 H 0.40 -2.65 8.70 -40.82 -0.36 -3.01 16 38 H 0.10 -0.33 7.73 -51.93 -0.40 -0.73 16 39 H 0.08 -0.35 8.14 -51.93 -0.42 -0.78 16 40 H 0.13 -0.19 6.65 -52.49 -0.35 -0.54 16 41 H 0.13 -0.18 8.06 -52.49 -0.42 -0.60 16 42 H 0.13 -0.43 8.06 -52.48 -0.42 -0.85 16 43 H 0.13 -0.47 8.05 -52.49 -0.42 -0.90 16 44 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 45 H 0.10 -0.20 6.31 -51.93 -0.33 -0.53 16 46 H 0.11 0.04 8.06 -52.49 -0.42 -0.38 16 47 H 0.12 -0.01 8.06 -52.49 -0.42 -0.43 16 48 H 0.12 0.07 8.06 -52.49 -0.42 -0.35 16 49 H 0.12 0.32 8.06 -52.48 -0.42 -0.10 16 LS Contribution 425.54 15.07 6.41 6.41 Total: 0.00 -10.11 425.54 -14.57 -24.68 By element: Atomic # 1 Polarization: -7.65 SS G_CDS: -6.44 Total: -14.09 kcal Atomic # 6 Polarization: -0.85 SS G_CDS: -6.90 Total: -7.75 kcal Atomic # 7 Polarization: 2.11 SS G_CDS: -0.54 Total: 1.57 kcal Atomic # 8 Polarization: -3.51 SS G_CDS: -0.36 Total: -3.87 kcal Atomic # 14 Polarization: -0.13 SS G_CDS: -5.24 Total: -5.37 kcal Atomic # 17 Polarization: -0.08 SS G_CDS: -1.50 Total: -1.58 kcal Total LS contribution 6.41 Total: 6.41 kcal Total: -10.11 -14.57 -24.68 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705206_9818708.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 76.483 kcal (2) G-P(sol) polarization free energy of solvation -10.111 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 66.372 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.572 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.684 kcal (6) G-S(sol) free energy of system = (1) + (5) 51.800 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds