Wall clock time and date at job start Tue Mar 9 2021 12:57:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86296 * 109.46985 * 2 1 4 4 C 1.50705 * 109.46838 * 119.99854 * 2 1 3 5 5 C 1.34234 * 126.49645 * 254.97789 * 4 2 1 6 6 N 1.36837 * 109.93778 * 180.02562 * 5 4 2 7 7 C 1.46494 * 125.06638 * 179.97438 * 6 5 4 8 8 C 1.50698 * 109.47542 * 265.02330 * 7 6 5 9 9 O 1.21282 * 119.99364 * 0.02562 * 8 7 6 10 10 N 1.34774 * 120.00600 * 179.97438 * 8 7 6 11 11 C 1.46496 * 120.00099 * 180.02562 * 10 8 7 12 12 H 1.08994 * 112.91109 * 23.75176 * 11 10 8 13 13 C 1.53787 * 113.61210 * 155.00440 * 11 10 8 14 14 C 1.53778 * 87.08035 * 89.11438 * 13 11 10 15 15 H 1.09004 * 113.61682 * 270.87724 * 14 13 11 16 16 C 1.50699 * 113.61086 * 140.06661 * 14 13 11 17 17 C 1.38194 * 119.99657 * 299.71797 * 16 14 13 18 18 C 1.38371 * 119.99055 * 179.76888 * 17 16 14 19 19 Cl 1.73599 * 120.01529 * 180.23261 * 18 17 16 20 20 C 1.38329 * 119.97131 * 0.53090 * 18 17 16 21 21 C 1.38235 * 119.98599 * 359.72853 * 20 18 17 22 22 C 1.38218 * 120.01523 * 359.97438 * 21 20 18 23 23 C 1.53778 * 87.08449 * 25.43264 * 14 13 11 24 24 C 1.37694 * 109.87329 * 0.26151 * 6 5 4 25 25 C 1.39085 * 133.51434 * 179.73474 * 24 6 5 26 26 C 1.37791 * 119.77904 * 179.97438 * 25 24 6 27 27 C 1.38789 * 120.66603 * 0.02562 * 26 25 24 28 28 C 1.36673 * 120.52733 * 359.57537 * 27 26 25 29 29 C 1.39583 * 119.76038 * 0.65332 * 28 27 26 30 30 H 0.96700 * 114.00206 * 300.00344 * 1 2 3 31 31 H 1.08993 * 109.46996 * 239.99505 * 2 1 3 32 32 H 1.48498 * 109.99896 * 299.99284 * 3 2 1 33 33 H 1.48492 * 110.00346 * 61.31603 * 3 2 1 34 34 H 1.07996 * 125.03422 * 359.97263 * 5 4 2 35 35 H 1.09005 * 109.47471 * 145.02227 * 7 6 5 36 36 H 1.09008 * 109.47060 * 25.02409 * 7 6 5 37 37 H 0.97002 * 119.99411 * 0.02562 * 10 8 7 38 38 H 1.08998 * 113.61103 * 203.66698 * 13 11 10 39 39 H 1.08999 * 113.61167 * 334.56160 * 13 11 10 40 40 H 1.08002 * 120.00070 * 0.02979 * 17 16 14 41 41 H 1.07996 * 120.00715 * 179.69684 * 20 18 17 42 42 H 1.08004 * 119.99416 * 180.02562 * 21 20 18 43 43 H 1.08001 * 119.98924 * 180.02562 * 22 21 20 44 44 H 1.08993 * 113.61229 * 220.02023 * 23 14 13 45 45 H 1.09000 * 113.61263 * 89.11673 * 23 14 13 46 46 H 1.07993 * 120.11069 * 0.02562 * 25 24 6 47 47 H 1.07995 * 119.66734 * 179.97438 * 26 25 24 48 48 H 1.07998 * 119.73761 * 180.02562 * 27 26 25 49 49 H 1.08003 * 120.11302 * 179.97438 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.4611 -0.1376 2.3228 6 7 2.8034 -1.0989 3.2344 7 6 3.4091 -0.8404 4.5430 8 6 4.9073 -0.9626 4.4362 9 8 5.4188 -1.2380 3.3715 10 7 5.6789 -0.7647 5.5233 11 6 7.1354 -0.8830 5.4192 12 1 7.5028 -0.7223 4.4057 13 6 7.8965 -0.0774 6.4854 14 6 7.8057 -1.3249 7.3799 15 1 6.9054 -1.3577 7.9934 16 6 9.0613 -1.5949 8.1685 17 6 10.2545 -1.8246 7.5104 18 6 11.4082 -2.0677 8.2346 19 17 12.9087 -2.3503 7.4087 20 6 11.3642 -2.0915 9.6170 21 6 10.1689 -1.8669 10.2741 22 6 9.0181 -1.6180 9.5502 23 6 7.6998 -2.1487 6.0857 24 6 2.4998 -2.3460 2.7359 25 6 2.6416 -3.6369 3.2337 26 6 2.2315 -4.7118 2.4754 27 6 1.6777 -4.5203 1.2173 28 6 1.5215 -3.2600 0.7120 29 6 1.9347 -2.1571 1.4612 30 1 -0.3933 0.4417 0.7650 31 1 1.7923 -0.5139 -0.8899 32 1 1.5616 2.4678 -1.2086 33 1 1.5878 2.4586 1.2241 34 1 2.5978 0.9247 2.4613 35 1 3.0360 -1.5660 5.2658 36 1 3.1491 0.1661 4.8712 37 1 5.2697 -0.5441 6.3747 38 1 8.9154 0.1782 6.1945 39 1 7.3379 0.7765 6.8687 40 1 10.2874 -1.8102 6.4309 41 1 12.2633 -2.2860 10.1828 42 1 10.1344 -1.8851 11.3535 43 1 8.0845 -1.4422 10.0641 44 1 6.9824 -2.9670 6.1466 45 1 8.6650 -2.4595 5.6857 46 1 3.0710 -3.7963 4.2118 47 1 2.3428 -5.7134 2.8636 48 1 1.3609 -5.3735 0.6359 49 1 1.0902 -3.1187 -0.2680 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705206_9818708.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:57:04 Heat of formation + Delta-G solvation = 55.974749 kcal Electronic energy + Delta-G solvation = -33186.951861 eV Core-core repulsion = 28687.066513 eV Total energy + Delta-G solvation = -4499.885349 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 397.123 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -42.54119 -41.54348 -40.34144 -38.93354 -38.14292 -37.66845 -37.38382 -34.69632 -34.00426 -31.96457 -31.70055 -31.28528 -30.23739 -28.95659 -26.71020 -26.42953 -25.56527 -23.88080 -23.64746 -22.91414 -22.49720 -21.80234 -20.68094 -20.17175 -18.74819 -18.56410 -18.05918 -17.73150 -17.34687 -16.86557 -16.47234 -16.42576 -16.38406 -16.25539 -16.06921 -15.60645 -15.46252 -15.24116 -14.96183 -14.73919 -14.73329 -14.65975 -14.48684 -14.25757 -14.06771 -13.73970 -13.54257 -13.48991 -13.14459 -12.96340 -12.71916 -12.58145 -12.56414 -12.45133 -12.39246 -12.13994 -11.99794 -11.81617 -11.73254 -11.64277 -11.20829 -11.13065 -10.54845 -10.44695 -10.12956 -9.84114 -9.61163 -9.15686 -8.63030 -4.85942 0.14499 0.17472 0.27150 0.64121 1.14774 1.35455 1.41098 1.47753 1.58367 1.69388 1.97738 2.19633 2.60513 2.95297 3.45210 3.54053 3.58940 3.63616 3.66510 3.70711 3.76987 3.84860 3.86430 3.96128 4.04356 4.06901 4.15845 4.22216 4.24454 4.30358 4.30944 4.43962 4.50437 4.59148 4.59243 4.71788 4.72197 4.76229 4.79289 4.84142 4.90158 4.95789 4.99569 5.01772 5.14163 5.14243 5.26578 5.38403 5.50136 5.51166 5.63134 5.66711 5.73804 5.75522 5.85848 6.19523 6.24087 6.50164 6.60935 7.17573 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.553 6.553 2 C -0.051 4.051 3 Si 0.765 3.235 4 C -0.216 4.216 5 C 0.075 3.925 6 N -0.466 5.466 7 C 0.088 3.912 8 C 0.494 3.506 9 O -0.567 6.567 10 N -0.693 5.693 11 C 0.119 3.881 12 H 0.080 0.920 13 C -0.124 4.124 14 C -0.062 4.062 15 H 0.125 0.875 16 C -0.063 4.063 17 C -0.119 4.119 18 C -0.049 4.049 19 Cl -0.084 7.084 20 C -0.128 4.128 21 C -0.108 4.108 22 C -0.112 4.112 23 C -0.146 4.146 24 C 0.092 3.908 25 C -0.133 4.133 26 C -0.108 4.108 27 C -0.154 4.154 28 C -0.088 4.088 29 C -0.116 4.116 30 H 0.384 0.616 31 H 0.103 0.897 32 H -0.303 1.303 33 H -0.258 1.258 34 H 0.198 0.802 35 H 0.143 0.857 36 H 0.163 0.837 37 H 0.421 0.579 38 H 0.092 0.908 39 H 0.096 0.904 40 H 0.134 0.866 41 H 0.137 0.863 42 H 0.152 0.848 43 H 0.153 0.847 44 H 0.070 0.930 45 H 0.086 0.914 46 H 0.133 0.867 47 H 0.145 0.855 48 H 0.135 0.865 49 H 0.118 0.882 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.473 3.394 9.897 10.473 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.361 6.361 2 C -0.159 4.159 3 Si 0.668 3.332 4 C -0.223 4.223 5 C -0.050 4.050 6 N -0.148 5.148 7 C -0.037 4.037 8 C 0.280 3.720 9 O -0.444 6.444 10 N -0.346 5.346 11 C 0.013 3.987 12 H 0.098 0.902 13 C -0.162 4.162 14 C -0.080 4.080 15 H 0.143 0.857 16 C -0.063 4.063 17 C -0.138 4.138 18 C -0.076 4.076 19 Cl -0.055 7.055 20 C -0.147 4.147 21 C -0.126 4.126 22 C -0.130 4.130 23 C -0.185 4.185 24 C -0.013 4.013 25 C -0.153 4.153 26 C -0.127 4.127 27 C -0.173 4.173 28 C -0.107 4.107 29 C -0.120 4.120 30 H 0.233 0.767 31 H 0.120 0.880 32 H -0.231 1.231 33 H -0.183 1.183 34 H 0.214 0.786 35 H 0.161 0.839 36 H 0.181 0.819 37 H 0.259 0.741 38 H 0.110 0.890 39 H 0.115 0.885 40 H 0.151 0.849 41 H 0.155 0.845 42 H 0.170 0.830 43 H 0.171 0.829 44 H 0.089 0.911 45 H 0.104 0.896 46 H 0.151 0.849 47 H 0.162 0.838 48 H 0.153 0.847 49 H 0.136 0.864 Dipole moment (debyes) X Y Z Total from point charges 0.041 3.777 8.832 9.606 hybrid contribution -0.622 -0.565 0.326 0.902 sum -0.582 3.211 9.158 9.722 Atomic orbital electron populations 1.86563 1.19089 1.80603 1.49864 1.24583 0.82810 1.11647 0.96897 0.94044 0.90436 0.71099 0.77667 1.20706 1.11369 0.91877 0.98381 1.22014 0.99187 0.95199 0.88630 1.43435 1.51996 1.03767 1.15613 1.21987 0.88714 1.09017 0.83970 1.21406 0.90439 0.76230 0.83934 1.90814 1.75636 1.48093 1.29895 1.45451 1.05807 1.70974 1.12393 1.21759 0.80168 0.96985 0.99782 0.90154 1.23354 1.01383 0.97051 0.94410 1.21647 0.95490 0.96585 0.94248 0.85685 1.19834 0.94197 0.98225 0.94033 1.21035 0.91088 1.00963 1.00677 1.21130 0.87558 1.05509 0.93389 1.98385 1.33233 1.94775 1.79129 1.21306 1.00208 1.01061 0.92129 1.21454 0.91589 0.98069 1.01529 1.21515 0.99665 0.98547 0.93280 1.23549 1.01822 0.97276 0.95840 1.18389 1.01528 0.87002 0.94412 1.20241 1.04587 0.89070 1.01450 1.21128 0.98213 0.99033 0.94321 1.20917 1.02329 0.97004 0.97046 1.20450 0.99108 0.91717 0.99428 1.19340 1.03952 0.93800 0.94916 0.76739 0.87951 1.23050 1.18308 0.78556 0.83885 0.81939 0.74058 0.88964 0.88526 0.84857 0.84543 0.83030 0.82886 0.91090 0.89578 0.84888 0.83756 0.84669 0.86408 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -3.63 12.88 -148.98 -1.92 -5.55 16 2 C -0.05 -0.21 3.06 71.24 0.22 0.01 16 3 Si 0.76 -0.37 30.82 68.60 2.11 1.75 16 4 C -0.22 -1.17 5.58 -18.62 -0.10 -1.28 16 5 C 0.08 0.05 9.89 83.00 0.82 0.87 16 6 N -0.47 -0.39 2.27 -519.99 -1.18 -1.57 16 7 C 0.09 -0.74 6.48 85.63 0.55 -0.19 16 8 C 0.49 -1.42 7.90 87.66 0.69 -0.73 16 9 O -0.57 -5.10 16.02 -3.04 -0.05 -5.15 16 10 N -0.69 6.29 5.26 -440.04 -2.32 3.97 16 11 C 0.12 -0.65 4.32 45.52 0.20 -0.45 16 12 H 0.08 0.05 7.47 -2.39 -0.02 0.04 16 13 C -0.12 1.10 7.29 31.12 0.23 1.33 16 14 C -0.06 0.55 3.85 -11.02 -0.04 0.50 16 15 H 0.13 -1.67 8.09 -2.38 -0.02 -1.69 16 16 C -0.06 0.28 5.29 -19.87 -0.11 0.17 16 17 C -0.12 0.08 8.41 22.29 0.19 0.27 16 18 C -0.05 -0.09 6.32 22.32 0.14 0.06 16 19 Cl -0.08 -0.31 28.96 -2.72 -0.08 -0.39 16 20 C -0.13 0.05 9.83 22.29 0.22 0.27 16 21 C -0.11 0.43 10.05 22.26 0.22 0.65 16 22 C -0.11 0.63 9.71 22.27 0.22 0.84 16 23 C -0.15 0.75 7.25 31.12 0.23 0.98 16 24 C 0.09 0.61 6.79 39.03 0.27 0.88 16 25 C -0.13 -0.64 10.00 22.37 0.22 -0.41 16 26 C -0.11 -0.51 10.01 22.30 0.22 -0.29 16 27 C -0.15 -1.02 9.97 22.04 0.22 -0.80 16 28 C -0.09 -0.84 10.05 22.23 0.22 -0.62 16 29 C -0.12 -1.11 6.35 -20.20 -0.13 -1.24 16 30 H 0.38 -0.08 8.70 -74.06 -0.64 -0.73 16 31 H 0.10 0.54 7.96 -2.39 -0.02 0.52 16 32 H -0.30 -2.22 7.11 99.48 0.71 -1.51 16 33 H -0.26 0.21 7.00 99.48 0.70 0.91 16 34 H 0.20 -1.22 6.27 -2.91 -0.02 -1.24 16 35 H 0.14 -1.92 8.14 -2.38 -0.02 -1.94 16 36 H 0.16 -2.70 8.12 -2.38 -0.02 -2.72 16 37 H 0.42 -7.02 8.70 -92.71 -0.81 -7.83 16 38 H 0.09 -0.63 7.73 -2.39 -0.02 -0.65 16 39 H 0.10 -1.15 8.14 -2.39 -0.02 -1.17 16 40 H 0.13 -0.20 6.65 -2.91 -0.02 -0.22 16 41 H 0.14 -0.28 8.06 -2.91 -0.02 -0.31 16 42 H 0.15 -1.26 8.06 -2.91 -0.02 -1.28 16 43 H 0.15 -1.67 8.05 -2.91 -0.02 -1.69 16 44 H 0.07 -0.28 8.14 -2.39 -0.02 -0.29 16 45 H 0.09 -0.26 6.31 -2.39 -0.02 -0.27 16 46 H 0.13 -0.03 8.06 -2.91 -0.02 -0.05 16 47 H 0.14 -0.05 8.06 -2.91 -0.02 -0.07 16 48 H 0.14 0.36 8.06 -2.91 -0.02 0.33 16 49 H 0.12 1.02 8.06 -2.91 -0.02 1.00 16 Total: 0.00 -27.81 425.54 0.85 -26.95 By element: Atomic # 1 Polarization: -20.45 SS G_CDS: -0.42 Total: -20.86 kcal Atomic # 6 Polarization: -3.86 SS G_CDS: 4.70 Total: 0.84 kcal Atomic # 7 Polarization: 5.90 SS G_CDS: -3.50 Total: 2.41 kcal Atomic # 8 Polarization: -8.73 SS G_CDS: -1.97 Total: -10.70 kcal Atomic # 14 Polarization: -0.37 SS G_CDS: 2.11 Total: 1.75 kcal Atomic # 17 Polarization: -0.31 SS G_CDS: -0.08 Total: -0.39 kcal Total: -27.81 0.85 -26.95 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705206_9818708.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 82.928 kcal (2) G-P(sol) polarization free energy of solvation -27.807 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 55.121 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.854 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.953 kcal (6) G-S(sol) free energy of system = (1) + (5) 55.975 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds