Wall clock time and date at job start Tue Mar 9 2021 12:57:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 O 1.42906 * 109.46882 * 2 1 4 4 C 1.35907 * 116.99470 * 275.06348 * 3 2 1 5 5 C 1.38729 * 120.05917 * 5.46768 * 4 3 2 6 6 C 1.38136 * 119.94477 * 179.72083 * 5 4 3 7 7 C 1.38267 * 120.05921 * 0.25437 * 6 5 4 8 8 C 1.50701 * 119.94742 * 179.97438 * 7 6 5 9 9 O 1.42901 * 109.46797 * 299.99705 * 8 7 6 10 10 Si 1.86295 * 109.46934 * 179.97438 * 8 7 6 11 11 C 1.38273 * 120.10825 * 359.97438 * 7 6 5 12 12 C 1.38148 * 120.05237 * 359.97438 * 11 7 6 13 13 C 1.50700 * 109.47249 * 119.99392 * 2 1 3 14 14 O 1.21282 * 119.99989 * 245.00334 * 13 2 1 15 15 N 1.34774 * 119.99770 * 65.00786 * 13 2 1 16 16 C 1.46502 * 119.99914 * 180.02562 * 15 13 2 17 17 H 1.08993 * 112.85279 * 25.32912 * 16 15 13 18 18 C 1.53789 * 113.61342 * 156.52581 * 16 15 13 19 19 C 1.53780 * 87.07954 * 89.11367 * 18 16 15 20 20 H 1.09005 * 113.61330 * 270.88225 * 19 18 16 21 21 C 1.50701 * 113.61519 * 140.06354 * 19 18 16 22 22 C 1.38180 * 119.98809 * 119.99328 * 21 19 18 23 23 C 1.38480 * 119.97278 * 180.02562 * 22 21 19 24 24 F 1.35101 * 120.02215 * 179.97438 * 23 22 21 25 25 C 1.38438 * 119.94927 * 0.02562 * 23 22 21 26 26 C 1.38213 * 119.97579 * 359.97438 * 25 23 22 27 27 C 1.38228 * 120.02461 * 359.73082 * 26 25 23 28 28 C 1.53784 * 113.61166 * 254.13047 * 16 15 13 29 29 H 1.08992 * 109.47274 * 60.00216 * 1 2 3 30 30 H 1.09003 * 109.46653 * 180.02562 * 1 2 3 31 31 H 1.08997 * 109.46916 * 299.99964 * 1 2 3 32 32 H 1.08993 * 109.47624 * 239.99934 * 2 1 3 33 33 H 1.08008 * 120.02463 * 359.97438 * 5 4 3 34 34 H 1.08006 * 119.97472 * 180.26817 * 6 5 4 35 35 H 1.09000 * 109.46856 * 59.99998 * 8 7 6 36 36 H 0.96701 * 113.99835 * 299.99680 * 9 8 7 37 37 H 1.48505 * 110.00025 * 58.68389 * 10 8 7 38 38 H 1.48503 * 109.99795 * 179.97438 * 10 8 7 39 39 H 1.07999 * 119.97124 * 180.02562 * 11 7 6 40 40 H 1.08001 * 120.02222 * 180.02562 * 12 11 7 41 41 H 0.97001 * 120.00154 * 359.97438 * 15 13 2 42 42 H 1.09003 * 113.61064 * 203.65887 * 18 16 15 43 43 H 1.08991 * 113.61071 * 334.56167 * 18 16 15 44 44 H 1.07997 * 120.00672 * 359.97438 * 22 21 19 45 45 H 1.08006 * 120.00982 * 179.97438 * 25 23 22 46 46 H 1.08000 * 119.98817 * 179.97438 * 26 25 23 47 47 H 1.08003 * 119.97525 * 180.29232 * 27 26 25 48 48 H 1.09001 * 113.61113 * 25.43315 * 28 16 15 49 49 H 1.08998 * 113.61655 * 156.33382 * 28 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3474 0.0000 4 6 2.1112 1.9646 -1.2063 5 6 1.6572 1.3300 -2.3534 6 6 1.7597 1.9619 -3.5774 7 6 2.3189 3.2237 -3.6608 8 6 2.4299 3.9106 -4.9976 9 8 3.2323 3.1179 -5.8751 10 14 3.2202 5.5825 -4.7728 11 6 2.7764 3.8564 -2.5196 12 6 2.6752 3.2291 -1.2930 13 6 2.0324 -0.7103 1.2305 14 8 2.6530 -0.0977 2.0734 15 7 1.7921 -2.0263 1.3942 16 6 2.2800 -2.7167 2.5907 17 1 2.4151 -2.0472 3.4402 18 6 1.4907 -3.9920 2.9309 19 6 2.4773 -4.7493 2.0266 20 1 2.1683 -4.7913 0.9821 21 6 2.8848 -6.0942 2.5708 22 6 2.6248 -7.2408 1.8447 23 6 2.9989 -8.4765 2.3453 24 9 2.7447 -9.5981 1.6364 25 6 3.6325 -8.5617 3.5732 26 6 3.8916 -7.4136 4.2978 27 6 3.5232 -6.1801 3.7943 28 6 3.4902 -3.6278 2.3258 29 1 -0.3633 0.5138 -0.8899 30 1 -0.3633 -1.0277 0.0005 31 1 -0.3633 0.5138 0.8900 32 1 1.8934 -0.5138 -0.8899 33 1 1.2203 0.3443 -2.2888 34 1 1.4024 1.4701 -4.4702 35 1 1.4354 4.0338 -5.4264 36 1 4.1326 2.9671 -5.5561 37 1 4.5640 5.4308 -4.1591 38 1 3.3360 6.2699 -6.0841 39 1 3.2124 4.8422 -2.5872 40 1 3.0324 3.7239 -0.4019 41 1 1.2955 -2.5162 0.7202 42 1 1.5537 -4.2773 3.9811 43 1 0.4683 -3.9864 2.5534 44 1 2.1293 -7.1731 0.8875 45 1 3.9244 -9.5250 3.9648 46 1 4.3855 -7.4798 5.2559 47 1 3.7302 -5.2830 4.3590 48 1 4.0807 -3.3284 1.4599 49 1 4.0988 -3.8137 3.2107 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705262_10157680.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:57:13 Heat of formation + Delta-G solvation = -63.612604 kcal Electronic energy + Delta-G solvation = -32100.467434 eV Core-core repulsion = 27488.938205 eV Total energy + Delta-G solvation = -4611.529229 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.157 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -49.84107 -41.99132 -41.38960 -40.34277 -39.26730 -38.54086 -37.25017 -34.91858 -33.28031 -32.18079 -32.04901 -31.48318 -31.12343 -26.98320 -26.92158 -26.52617 -25.39655 -24.20112 -23.83466 -22.94421 -22.44985 -21.55976 -20.44338 -19.50721 -18.77329 -18.38140 -18.24775 -17.45739 -17.22768 -17.14450 -16.88300 -16.70836 -16.55046 -16.32949 -16.23738 -15.99263 -15.72168 -15.53273 -15.23902 -15.05103 -14.75701 -14.68143 -14.41289 -14.27475 -14.20647 -13.92694 -13.75409 -13.66964 -13.55251 -13.29759 -13.07244 -12.98581 -12.93665 -12.86772 -12.21365 -12.18555 -12.11074 -11.94825 -11.87086 -11.59051 -11.44899 -10.88041 -10.59873 -10.26133 -10.06996 -9.99480 -9.67094 -9.22567 -4.95829 0.08989 0.15272 0.21933 0.31963 1.29144 1.38490 1.40286 1.60194 1.96971 2.38347 2.47647 2.62886 3.16085 3.22358 3.31842 3.36871 3.45638 3.50370 3.54054 3.65277 3.68759 3.71065 3.79926 3.81293 3.82823 3.92749 4.00401 4.10117 4.18130 4.23235 4.31065 4.37579 4.42172 4.46122 4.53824 4.55211 4.61129 4.64915 4.68701 4.78952 4.82154 4.85469 4.91992 4.96230 5.01002 5.09073 5.16050 5.26582 5.26965 5.33329 5.45197 5.47239 5.63230 5.84609 6.17183 6.32963 6.39831 7.01371 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.177 4.177 2 C 0.067 3.933 3 O -0.283 6.283 4 C 0.135 3.865 5 C -0.212 4.212 6 C -0.051 4.051 7 C -0.156 4.156 8 C -0.069 4.069 9 O -0.531 6.531 10 Si 0.681 3.319 11 C -0.075 4.075 12 C -0.142 4.142 13 C 0.522 3.478 14 O -0.508 6.508 15 N -0.710 5.710 16 C 0.121 3.879 17 H 0.108 0.892 18 C -0.133 4.133 19 C -0.076 4.076 20 H 0.100 0.900 21 C -0.043 4.043 22 C -0.151 4.151 23 C 0.101 3.899 24 F -0.139 7.139 25 C -0.158 4.158 26 C -0.086 4.086 27 C -0.128 4.128 28 C -0.143 4.143 29 H 0.079 0.921 30 H 0.079 0.921 31 H 0.078 0.922 32 H 0.100 0.900 33 H 0.131 0.869 34 H 0.129 0.871 35 H 0.117 0.883 36 H 0.376 0.624 37 H -0.260 1.260 38 H -0.257 1.257 39 H 0.134 0.866 40 H 0.138 0.862 41 H 0.402 0.598 42 H 0.102 0.898 43 H 0.079 0.921 44 H 0.134 0.866 45 H 0.135 0.865 46 H 0.134 0.866 47 H 0.131 0.869 48 H 0.076 0.924 49 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.967 -0.849 0.888 3.211 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.235 4.235 2 C 0.007 3.993 3 O -0.196 6.196 4 C 0.090 3.910 5 C -0.230 4.230 6 C -0.069 4.069 7 C -0.156 4.156 8 C -0.179 4.179 9 O -0.338 6.338 10 Si 0.583 3.417 11 C -0.092 4.092 12 C -0.160 4.160 13 C 0.306 3.694 14 O -0.381 6.381 15 N -0.364 5.364 16 C 0.016 3.984 17 H 0.126 0.874 18 C -0.171 4.171 19 C -0.094 4.094 20 H 0.118 0.882 21 C -0.043 4.043 22 C -0.170 4.170 23 C 0.082 3.918 24 F -0.118 7.118 25 C -0.177 4.177 26 C -0.104 4.104 27 C -0.146 4.146 28 C -0.182 4.182 29 H 0.098 0.902 30 H 0.098 0.902 31 H 0.097 0.903 32 H 0.118 0.882 33 H 0.149 0.851 34 H 0.147 0.853 35 H 0.135 0.865 36 H 0.223 0.777 37 H -0.185 1.185 38 H -0.182 1.182 39 H 0.151 0.849 40 H 0.156 0.844 41 H 0.237 0.763 42 H 0.120 0.880 43 H 0.098 0.902 44 H 0.152 0.848 45 H 0.153 0.847 46 H 0.152 0.848 47 H 0.149 0.851 48 H 0.095 0.905 49 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges -2.347 0.183 1.124 2.609 hybrid contribution 0.389 -1.785 -0.868 2.023 sum -1.957 -1.602 0.256 2.542 Atomic orbital electron populations 1.22357 0.92156 1.03960 1.05014 1.22181 0.96021 0.83292 0.97833 1.86228 1.80911 1.25386 1.27034 1.19083 0.95114 0.92875 0.83972 1.21319 1.07254 1.01797 0.92669 1.20793 0.95477 0.93698 0.96919 1.20198 1.03472 0.96617 0.95359 1.24939 1.00526 1.03439 0.89025 1.86591 1.27533 1.72078 1.47575 0.95054 0.84021 0.78874 0.83773 1.20840 0.97924 0.98981 0.91481 1.20415 1.03199 0.93635 0.98767 1.20087 0.79804 0.82003 0.87473 1.90782 1.38511 1.65625 1.43195 1.45525 1.58231 1.08780 1.23816 1.21869 0.94840 0.93264 0.88458 0.87394 1.23426 0.98660 0.93815 1.01218 1.21693 0.97620 0.90304 0.99791 0.88192 1.19507 0.96771 0.93906 0.94138 1.21046 1.03489 0.90827 1.01656 1.17738 1.00188 0.82457 0.91427 1.91524 1.92165 1.50214 1.77877 1.21223 1.01653 1.00572 0.94233 1.21050 0.98166 0.91529 0.99660 1.21108 0.99509 0.98138 0.95865 1.23632 0.96610 0.94575 1.03367 0.90184 0.90206 0.90331 0.88243 0.85109 0.85265 0.86479 0.77656 1.18464 1.18234 0.84853 0.84450 0.76307 0.87991 0.90198 0.84821 0.84672 0.84783 0.85104 0.90485 0.88315 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.51 9.12 37.16 0.34 0.85 16 2 C 0.07 -0.06 2.64 -27.88 -0.07 -0.13 16 3 O -0.28 -0.69 9.34 -39.31 -0.37 -1.05 16 4 C 0.13 0.19 6.60 -39.22 -0.26 -0.07 16 5 C -0.21 0.05 8.24 -39.44 -0.33 -0.28 16 6 C -0.05 0.00 9.60 -39.61 -0.38 -0.38 16 7 C -0.16 0.00 5.39 -104.60 -0.56 -0.57 16 8 C -0.07 0.03 2.82 36.01 0.10 0.13 16 9 O -0.53 -0.57 12.77 -35.23 -0.45 -1.02 16 10 Si 0.68 -0.62 29.78 -169.99 -5.06 -5.68 16 11 C -0.07 0.01 8.66 -39.60 -0.34 -0.34 16 12 C -0.14 -0.15 9.99 -39.43 -0.39 -0.54 16 13 C 0.52 0.47 7.18 -10.99 -0.08 0.39 16 14 O -0.51 -2.91 16.13 -14.31 -0.23 -3.14 16 15 N -0.71 1.73 5.23 -53.01 -0.28 1.45 16 16 C 0.12 -0.25 4.30 -67.11 -0.29 -0.54 16 17 H 0.11 -0.03 7.50 -51.93 -0.39 -0.42 16 18 C -0.13 0.48 7.29 -25.92 -0.19 0.29 16 19 C -0.08 0.23 3.87 -90.82 -0.35 -0.12 16 20 H 0.10 -0.40 8.09 -51.93 -0.42 -0.82 16 21 C -0.04 0.06 5.29 -104.63 -0.55 -0.50 16 22 C -0.15 0.02 9.69 -39.51 -0.38 -0.37 16 23 C 0.10 0.13 7.30 -39.42 -0.29 -0.16 16 24 F -0.14 -0.39 17.27 2.25 0.04 -0.35 16 25 C -0.16 -0.02 10.03 -39.52 -0.40 -0.42 16 26 C -0.09 0.10 10.04 -39.59 -0.40 -0.30 16 27 C -0.13 0.19 8.63 -39.58 -0.34 -0.15 16 28 C -0.14 0.33 7.27 -25.77 -0.19 0.15 16 29 H 0.08 -0.25 6.91 -51.93 -0.36 -0.60 16 30 H 0.08 -0.42 7.92 -51.93 -0.41 -0.83 16 31 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 32 H 0.10 -0.30 6.31 -51.93 -0.33 -0.63 16 33 H 0.13 -0.33 5.43 -52.48 -0.28 -0.61 16 34 H 0.13 -0.11 8.06 -52.48 -0.42 -0.53 16 35 H 0.12 -0.13 7.96 -51.93 -0.41 -0.55 16 36 H 0.38 -0.59 8.70 45.56 0.40 -0.19 16 37 H -0.26 -0.30 7.11 56.52 0.40 0.10 16 38 H -0.26 -0.63 7.11 56.52 0.40 -0.23 16 39 H 0.13 -0.26 4.87 -52.49 -0.26 -0.51 16 40 H 0.14 0.05 8.06 -52.49 -0.42 -0.38 16 41 H 0.40 -2.15 8.49 -40.82 -0.35 -2.50 16 42 H 0.10 -0.37 7.73 -51.93 -0.40 -0.77 16 43 H 0.08 -0.33 8.14 -51.93 -0.42 -0.75 16 44 H 0.13 -0.19 8.05 -52.49 -0.42 -0.62 16 45 H 0.14 -0.15 8.06 -52.48 -0.42 -0.57 16 46 H 0.13 -0.42 8.06 -52.49 -0.42 -0.84 16 47 H 0.13 -0.42 6.65 -52.48 -0.35 -0.77 16 48 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 49 H 0.10 -0.26 6.31 -51.93 -0.33 -0.59 16 LS Contribution 406.26 15.07 6.12 6.12 Total: 0.00 -9.34 406.26 -12.05 -21.39 By element: Atomic # 1 Polarization: -8.20 SS G_CDS: -6.47 Total: -14.67 kcal Atomic # 6 Polarization: 2.32 SS G_CDS: -5.35 Total: -3.03 kcal Atomic # 7 Polarization: 1.73 SS G_CDS: -0.28 Total: 1.45 kcal Atomic # 8 Polarization: -4.17 SS G_CDS: -1.05 Total: -5.22 kcal Atomic # 9 Polarization: -0.39 SS G_CDS: 0.04 Total: -0.35 kcal Atomic # 14 Polarization: -0.62 SS G_CDS: -5.06 Total: -5.68 kcal Total LS contribution 6.12 Total: 6.12 kcal Total: -9.34 -12.05 -21.39 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705262_10157680.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -42.227 kcal (2) G-P(sol) polarization free energy of solvation -9.337 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.564 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.048 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.385 kcal (6) G-S(sol) free energy of system = (1) + (5) -63.613 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds