Wall clock time and date at job start Tue Mar 9 2021 12:57:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46506 * 1 3 3 C 1.37643 * 125.68022 * 2 1 4 4 C 1.46684 * 126.23259 * 359.97438 * 3 2 1 5 5 O 1.21693 * 119.99857 * 5.09565 * 4 3 2 6 6 N 1.34772 * 120.00043 * 185.10418 * 4 3 2 7 7 C 1.46497 * 120.00012 * 185.93233 * 6 4 3 8 8 H 1.09001 * 112.85091 * 334.66470 * 7 6 4 9 9 C 1.53783 * 113.61612 * 105.85957 * 7 6 4 10 10 C 1.54053 * 86.98696 * 89.16214 * 9 7 6 11 11 H 1.09003 * 113.68954 * 270.88033 * 10 9 7 12 12 C 1.50703 * 113.62004 * 139.97880 * 10 9 7 13 13 C 1.38172 * 119.98819 * 322.23463 * 12 10 9 14 14 C 1.38478 * 119.97457 * 179.72895 * 13 12 10 15 15 F 1.35101 * 120.02856 * 180.25432 * 14 13 12 16 16 C 1.38440 * 119.94670 * 0.53944 * 14 13 12 17 17 C 1.38217 * 119.97358 * 359.73714 * 16 14 13 18 18 C 1.38221 * 120.02726 * 359.97438 * 17 16 14 19 19 C 1.53780 * 113.61525 * 203.46717 * 7 6 4 20 20 C 1.37872 * 107.53828 * 180.02562 * 3 2 1 21 21 C 1.39836 * 107.08338 * 0.02562 * 20 3 2 22 22 C 1.35462 * 107.86312 * 359.73437 * 21 20 3 23 23 C 1.50696 * 125.56360 * 180.26352 * 22 21 20 24 24 O 1.42899 * 109.46995 * 150.19729 * 23 22 21 25 25 Si 1.86301 * 109.47479 * 30.19570 * 23 22 21 26 26 H 1.09001 * 109.46865 * 95.77094 * 1 2 3 27 27 H 1.08996 * 109.46730 * 215.76452 * 1 2 3 28 28 H 1.08996 * 109.46712 * 335.76680 * 1 2 3 29 29 H 0.97001 * 120.00373 * 5.92563 * 6 4 3 30 30 H 1.08998 * 113.62101 * 203.66399 * 9 7 6 31 31 H 1.09000 * 113.61399 * 334.56795 * 9 7 6 32 32 H 1.08004 * 120.01108 * 359.97438 * 13 12 10 33 33 H 1.08003 * 120.01343 * 179.74579 * 16 14 13 34 34 H 1.08005 * 119.98519 * 179.97438 * 17 16 14 35 35 H 1.08002 * 119.97372 * 180.02562 * 18 17 16 36 36 H 1.08990 * 113.61713 * 25.43243 * 19 7 6 37 37 H 1.09005 * 113.61684 * 156.25222 * 19 7 6 38 38 H 1.08002 * 126.46143 * 179.97438 * 20 3 2 39 39 H 1.07994 * 126.06855 * 180.02562 * 21 20 3 40 40 H 1.08997 * 109.46840 * 270.19434 * 23 22 21 41 41 H 0.96703 * 114.00495 * 299.99506 * 24 23 22 42 42 H 1.48500 * 109.99488 * 58.68070 * 25 23 22 43 43 H 1.48495 * 110.00161 * 179.97438 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.2679 1.1181 0.0000 4 6 1.8125 2.5124 -0.0005 5 8 0.6257 2.7649 0.0926 6 7 2.7084 3.5139 -0.1043 7 6 2.2696 4.9056 0.0255 8 1 1.2201 5.0444 -0.2338 9 6 2.6648 5.5539 1.3628 10 6 3.9781 5.9761 0.6769 11 1 4.7725 5.2341 0.7578 12 6 4.4336 7.3641 1.0472 13 6 3.5053 8.3734 1.2163 14 6 3.9237 9.6474 1.5620 15 9 3.0165 10.6339 1.7327 16 6 5.2728 9.9108 1.7268 17 6 6.2000 8.9009 1.5514 18 6 5.7807 7.6282 1.2122 19 6 3.2107 5.9141 -0.6543 20 6 3.5781 0.6888 -0.0006 21 6 3.5522 -0.7094 -0.0015 22 6 2.2555 -1.1010 0.0045 23 6 1.7709 -2.5279 0.0114 24 8 0.5131 -2.6005 0.6857 25 14 3.0117 -3.6010 0.8943 26 1 -0.3633 -0.1033 -1.0225 27 1 -0.3633 -0.8339 0.6006 28 1 -0.3632 0.9371 0.4218 29 1 3.6437 3.3132 -0.2648 30 1 2.0302 6.3939 1.6453 31 1 2.8039 4.8366 2.1716 32 1 2.4534 8.1679 1.0829 33 1 5.6006 10.9050 1.9924 34 1 7.2525 9.1063 1.6795 35 1 6.5059 6.8396 1.0758 36 1 3.7902 5.4874 -1.4729 37 1 2.7247 6.8519 -0.9237 38 1 4.4584 1.3143 -0.0011 39 1 4.4133 -1.3612 -0.0018 40 1 1.6537 -2.8767 -1.0146 41 1 0.5424 -2.3048 1.6059 42 1 3.2041 -3.1161 2.2847 43 1 2.5451 -5.0107 0.9085 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705262_10803936.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:57:22 Heat of formation + Delta-G solvation = -5.180050 kcal Electronic energy + Delta-G solvation = -27290.339808 eV Core-core repulsion = 23218.364445 eV Total energy + Delta-G solvation = -4071.975362 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.137 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -49.80550 -42.62298 -41.49284 -40.00460 -38.64205 -37.95746 -34.87925 -33.65333 -32.12757 -31.54076 -31.10357 -27.58103 -27.20473 -26.86776 -25.99209 -23.91139 -23.30861 -22.69312 -21.59571 -20.61582 -20.23583 -18.93145 -18.57688 -18.10732 -17.31684 -17.15688 -17.07344 -16.91142 -16.51795 -16.35900 -16.09340 -15.72703 -15.60540 -15.24548 -15.00729 -14.87099 -14.74648 -14.43784 -14.29826 -14.18830 -13.93634 -13.83753 -13.61451 -13.18098 -13.05570 -12.98741 -12.92904 -12.52855 -12.36199 -12.08807 -11.96762 -11.81961 -11.33231 -11.17136 -10.77771 -10.18454 -9.93678 -9.74814 -9.64392 -9.10952 -5.01184 0.13291 0.18279 0.38622 1.07985 1.50067 1.63623 1.70232 1.93672 2.31196 2.36734 2.51817 3.03892 3.18177 3.35755 3.50611 3.51826 3.55007 3.68891 3.75112 3.82506 3.98647 4.00155 4.08629 4.15859 4.30445 4.34243 4.36983 4.41706 4.49776 4.51895 4.59584 4.70432 4.74349 4.82590 4.82754 4.88721 4.97185 5.00520 5.04309 5.12314 5.13067 5.29695 5.42709 5.52512 5.67909 5.88288 5.95941 6.10717 6.18115 6.42698 7.14802 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.050 3.950 2 N -0.391 5.391 3 C -0.054 4.054 4 C 0.595 3.405 5 O -0.544 6.544 6 N -0.702 5.702 7 C 0.122 3.878 8 H 0.108 0.892 9 C -0.145 4.145 10 C -0.074 4.074 11 H 0.103 0.897 12 C -0.043 4.043 13 C -0.153 4.153 14 C 0.102 3.898 15 F -0.139 7.139 16 C -0.159 4.159 17 C -0.087 4.087 18 C -0.127 4.127 19 C -0.135 4.135 20 C -0.135 4.135 21 C -0.198 4.198 22 C 0.013 3.987 23 C -0.056 4.056 24 O -0.532 6.532 25 Si 0.719 3.281 26 H 0.074 0.926 27 H 0.100 0.900 28 H 0.105 0.895 29 H 0.404 0.596 30 H 0.096 0.904 31 H 0.077 0.923 32 H 0.136 0.864 33 H 0.135 0.865 34 H 0.134 0.866 35 H 0.129 0.871 36 H 0.080 0.920 37 H 0.100 0.900 38 H 0.147 0.853 39 H 0.154 0.846 40 H 0.124 0.876 41 H 0.378 0.622 42 H -0.257 1.257 43 H -0.255 1.255 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.984 -1.722 -0.954 6.300 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.091 4.091 2 N -0.064 5.064 3 C -0.168 4.168 4 C 0.383 3.617 5 O -0.423 6.423 6 N -0.353 5.353 7 C 0.016 3.984 8 H 0.126 0.874 9 C -0.183 4.183 10 C -0.093 4.093 11 H 0.121 0.879 12 C -0.043 4.043 13 C -0.171 4.171 14 C 0.083 3.917 15 F -0.118 7.118 16 C -0.177 4.177 17 C -0.105 4.105 18 C -0.145 4.145 19 C -0.172 4.172 20 C -0.161 4.161 21 C -0.221 4.221 22 C -0.105 4.105 23 C -0.165 4.165 24 O -0.338 6.338 25 Si 0.618 3.382 26 H 0.093 0.907 27 H 0.118 0.882 28 H 0.123 0.877 29 H 0.240 0.760 30 H 0.115 0.885 31 H 0.096 0.904 32 H 0.154 0.846 33 H 0.153 0.847 34 H 0.152 0.848 35 H 0.147 0.853 36 H 0.099 0.901 37 H 0.118 0.882 38 H 0.164 0.836 39 H 0.171 0.829 40 H 0.142 0.858 41 H 0.226 0.774 42 H -0.181 1.181 43 H -0.179 1.179 Dipole moment (debyes) X Y Z Total from point charges 4.607 -2.231 -0.772 5.177 hybrid contribution -0.554 0.772 0.574 1.110 sum 4.053 -1.459 -0.197 4.312 Atomic orbital electron populations 1.22645 0.75594 1.06391 1.04433 1.43769 1.07009 1.04056 1.51528 1.20006 0.90574 0.87402 1.18835 1.16972 0.85458 0.83518 0.75721 1.90789 1.16208 1.84715 1.50573 1.45257 1.11430 1.04923 1.73704 1.21847 1.00238 0.79757 0.96509 0.87448 1.23644 0.96156 1.01065 0.97475 1.21696 0.97372 0.93284 0.96914 0.87864 1.19518 0.92853 0.94568 0.97338 1.20995 1.01094 0.91414 1.03638 1.17715 0.86763 0.85584 1.01685 1.91525 1.66594 1.60699 1.92949 1.21217 0.91399 1.01279 1.03846 1.21054 0.99751 0.92334 0.97379 1.21151 0.95262 0.97266 1.00794 1.23424 0.97563 0.99783 0.96478 1.21289 0.94305 0.95243 1.05264 1.20549 0.94925 0.95217 1.11449 1.21097 0.91101 0.89132 1.09150 1.24941 0.93210 0.94529 1.03854 1.86591 1.29889 1.88146 1.29213 0.94403 0.84743 0.77385 0.81712 0.90750 0.88170 0.87701 0.76021 0.88527 0.90415 0.84628 0.84705 0.84841 0.85261 0.90104 0.88156 0.83557 0.82878 0.85845 0.77363 1.18120 1.17925 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 0.07 10.33 59.85 0.62 0.69 16 2 N -0.39 -0.75 3.16 -115.62 -0.37 -1.11 16 3 C -0.05 -0.10 6.89 -81.98 -0.56 -0.66 16 4 C 0.59 1.42 7.77 -12.85 -0.10 1.32 16 5 O -0.54 -3.04 14.14 5.20 0.07 -2.96 16 6 N -0.70 0.62 5.24 -54.32 -0.28 0.33 16 7 C 0.12 -0.13 4.33 -67.12 -0.29 -0.42 16 8 H 0.11 0.08 7.44 -51.93 -0.39 -0.31 16 9 C -0.14 0.22 7.27 -25.77 -0.19 0.03 16 10 C -0.07 0.19 3.87 -90.81 -0.35 -0.16 16 11 H 0.10 -0.39 8.09 -51.93 -0.42 -0.81 16 12 C -0.04 0.04 5.29 -104.63 -0.55 -0.51 16 13 C -0.15 -0.03 8.58 -39.52 -0.34 -0.37 16 14 C 0.10 0.16 7.30 -39.42 -0.29 -0.13 16 15 F -0.14 -0.43 17.27 2.25 0.04 -0.40 16 16 C -0.16 -0.06 10.03 -39.51 -0.40 -0.45 16 17 C -0.09 0.08 10.04 -39.60 -0.40 -0.32 16 18 C -0.13 0.16 9.71 -39.58 -0.38 -0.23 16 19 C -0.13 0.35 7.28 -25.92 -0.19 0.16 16 20 C -0.13 0.05 10.35 -39.12 -0.40 -0.35 16 21 C -0.20 0.13 9.37 -39.98 -0.37 -0.24 16 22 C 0.01 0.01 6.14 -81.95 -0.50 -0.50 16 23 C -0.06 0.05 2.99 36.00 0.11 0.16 16 24 O -0.53 0.00 10.10 -35.23 -0.36 -0.35 16 25 Si 0.72 -1.45 31.11 -169.99 -5.29 -6.74 16 26 H 0.07 0.10 8.14 -51.93 -0.42 -0.32 16 27 H 0.10 0.00 5.24 -51.93 -0.27 -0.27 16 28 H 0.10 0.29 5.92 -51.93 -0.31 -0.02 16 29 H 0.40 -1.37 7.66 -40.82 -0.31 -1.68 16 30 H 0.10 -0.14 6.33 -51.93 -0.33 -0.47 16 31 H 0.08 -0.05 8.14 -51.93 -0.42 -0.48 16 32 H 0.14 -0.11 6.68 -52.48 -0.35 -0.46 16 33 H 0.14 -0.12 8.06 -52.48 -0.42 -0.54 16 34 H 0.13 -0.40 8.06 -52.48 -0.42 -0.82 16 35 H 0.13 -0.42 8.05 -52.49 -0.42 -0.84 16 36 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 37 H 0.10 -0.25 7.72 -51.93 -0.40 -0.65 16 38 H 0.15 -0.49 7.49 -52.49 -0.39 -0.89 16 39 H 0.15 -0.55 6.86 -52.49 -0.36 -0.91 16 40 H 0.12 -0.20 7.96 -51.93 -0.41 -0.62 16 41 H 0.38 -0.88 8.32 45.56 0.38 -0.50 16 42 H -0.26 -0.16 7.11 56.52 0.40 0.24 16 43 H -0.25 -0.27 7.11 56.52 0.40 0.13 16 LS Contribution 357.07 15.07 5.38 5.38 Total: 0.00 -8.03 357.07 -10.70 -18.73 By element: Atomic # 1 Polarization: -5.59 SS G_CDS: -5.30 Total: -10.89 kcal Atomic # 6 Polarization: 2.62 SS G_CDS: -4.60 Total: -1.98 kcal Atomic # 7 Polarization: -0.13 SS G_CDS: -0.65 Total: -0.78 kcal Atomic # 8 Polarization: -3.04 SS G_CDS: -0.28 Total: -3.32 kcal Atomic # 9 Polarization: -0.43 SS G_CDS: 0.04 Total: -0.40 kcal Atomic # 14 Polarization: -1.45 SS G_CDS: -5.29 Total: -6.74 kcal Total LS contribution 5.38 Total: 5.38 kcal Total: -8.03 -10.70 -18.73 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705262_10803936.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.545 kcal (2) G-P(sol) polarization free energy of solvation -8.026 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 5.519 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.699 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.725 kcal (6) G-S(sol) free energy of system = (1) + (5) -5.180 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds