Wall clock time and date at job start Tue Mar 9 2021 12:57:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42908 * 1 3 3 Si 1.86299 * 109.47072 * 2 1 4 4 C 1.50694 * 109.46992 * 119.99691 * 2 1 3 5 5 C 1.37866 * 119.88932 * 65.28410 * 4 2 1 6 6 C 1.39654 * 119.87814 * 180.23157 * 5 4 2 7 7 C 1.47691 * 120.16856 * 179.74120 * 6 5 4 8 8 O 1.21571 * 120.00166 * 179.72012 * 7 6 5 9 9 N 1.34776 * 119.99809 * 359.72259 * 7 6 5 10 10 C 1.46501 * 119.99775 * 180.02562 * 9 7 6 11 11 H 1.08996 * 112.84970 * 23.80265 * 10 9 7 12 12 C 1.53785 * 113.61435 * 154.99908 * 10 9 7 13 13 C 1.53783 * 87.08168 * 89.11163 * 12 10 9 14 14 H 1.08995 * 113.61634 * 270.80086 * 13 12 10 15 15 C 1.50699 * 113.61148 * 139.97895 * 13 12 10 16 16 C 1.38226 * 119.99053 * 300.02330 * 15 13 12 17 17 C 1.38265 * 120.05319 * 179.97438 * 16 15 13 18 18 C 1.38176 * 120.02306 * 359.78900 * 17 16 15 19 19 C 1.38487 * 119.97468 * 0.46543 * 18 17 16 20 20 F 1.35104 * 120.02441 * 179.78758 * 19 18 17 21 21 C 1.38216 * 119.98433 * 120.00527 * 15 13 12 22 22 C 1.53779 * 113.61284 * 252.49517 * 10 9 7 23 23 C 1.39831 * 119.66537 * 359.46466 * 6 5 4 24 24 F 1.35097 * 120.10680 * 180.25817 * 23 6 5 25 25 C 1.38320 * 119.78166 * 0.27445 * 23 6 5 26 26 C 1.38213 * 120.11468 * 0.02562 * 25 23 6 27 27 H 0.96701 * 114.00016 * 299.99957 * 1 2 3 28 28 H 1.08995 * 109.46716 * 240.00072 * 2 1 3 29 29 H 1.48507 * 109.99812 * 300.00179 * 3 2 1 30 30 H 1.48498 * 110.00232 * 61.31759 * 3 2 1 31 31 H 1.07992 * 120.06026 * 359.97007 * 5 4 2 32 32 H 0.97002 * 120.00176 * 359.97438 * 9 7 6 33 33 H 1.09006 * 113.61311 * 334.56812 * 12 10 9 34 34 H 1.08999 * 113.61290 * 203.66282 * 12 10 9 35 35 H 1.08001 * 119.97063 * 359.97438 * 16 15 13 36 36 H 1.07993 * 119.98872 * 180.02562 * 17 16 15 37 37 H 1.07999 * 120.01654 * 180.22962 * 18 17 16 38 38 H 1.08004 * 120.01333 * 0.04169 * 21 15 13 39 39 H 1.09000 * 113.61770 * 156.33900 * 22 10 9 40 40 H 1.09002 * 113.61588 * 25.43318 * 22 10 9 41 41 H 1.07995 * 119.94193 * 180.02562 * 25 23 6 42 42 H 1.07993 * 119.83028 * 179.97438 * 26 25 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9314 -0.7103 1.2305 5 6 1.6892 -2.0578 1.3929 6 6 2.1506 -2.7148 2.5356 7 6 1.8898 -4.1569 2.7188 8 8 2.2972 -4.7269 3.7123 9 7 1.2001 -4.8410 1.7845 10 6 0.9409 -6.2714 1.9666 11 1 0.9689 -6.5768 3.0125 12 6 -0.3010 -6.7734 1.2112 13 6 0.6302 -7.0397 0.0166 14 1 0.7370 -6.1860 -0.6526 15 6 0.3232 -8.3214 -0.7141 16 6 0.3856 -9.5297 -0.0458 17 6 0.1036 -10.7064 -0.7148 18 6 -0.2452 -10.6752 -2.0515 19 6 -0.3029 -9.4657 -2.7235 20 9 -0.6396 -9.4344 -4.0315 21 6 -0.0211 -8.2881 -2.0523 22 6 1.7728 -7.1712 1.0376 23 6 2.8657 -2.0017 3.5026 24 9 3.3207 -2.6295 4.6090 25 6 3.1055 -0.6513 3.3229 26 6 2.6393 -0.0088 2.1915 27 1 -0.3933 0.4417 0.7651 28 1 1.7923 -0.5138 -0.8900 29 1 1.5615 2.4679 -1.2085 30 1 1.5879 2.4586 1.2242 31 1 1.1400 -2.6033 0.6398 32 1 0.8747 -4.3861 0.9920 33 1 -1.0414 -5.9959 1.0227 34 1 -0.7348 -7.6782 1.6368 35 1 0.6548 -9.5547 0.9998 36 1 0.1522 -11.6499 -0.1916 37 1 -0.4691 -11.5941 -2.5730 38 1 -0.0694 -7.3439 -2.5744 39 1 1.9059 -8.1848 1.4157 40 1 2.7066 -6.7149 0.7090 41 1 3.6579 -0.0981 4.0680 42 1 2.8287 1.0458 2.0561 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705262_12335834.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:57:36 Heat of formation + Delta-G solvation = -70.826861 kcal Electronic energy + Delta-G solvation = -28951.094870 eV Core-core repulsion = 24499.556262 eV Total energy + Delta-G solvation = -4451.538608 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.117 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -49.89002 -49.80924 -41.81185 -40.91289 -39.89748 -38.67311 -37.70340 -34.79446 -32.87806 -32.44606 -31.95890 -31.17541 -26.87449 -26.82485 -26.68617 -25.37774 -23.85456 -23.48962 -22.59509 -21.71610 -20.38615 -19.30446 -18.64028 -18.44352 -18.18145 -17.44181 -17.37591 -17.11938 -16.88022 -16.83165 -16.52038 -16.36298 -16.14818 -15.95408 -15.76464 -15.55434 -15.33249 -14.90827 -14.68915 -14.46702 -14.39513 -14.21405 -13.87683 -13.68595 -13.66862 -13.30878 -13.01000 -12.95123 -12.86438 -12.82247 -12.42202 -11.90760 -11.85248 -11.82610 -11.39325 -11.13767 -10.75748 -10.46286 -10.17259 -9.96066 -9.90739 -9.63562 -5.12263 -0.56068 -0.15063 0.12368 0.18623 1.08136 1.42185 1.60118 1.81505 1.88239 2.42015 2.51326 2.97228 3.12715 3.19710 3.27436 3.32083 3.36295 3.47111 3.54243 3.58023 3.73609 3.82497 3.84176 3.93914 3.98296 4.03849 4.13767 4.26578 4.34489 4.40460 4.50888 4.58474 4.61317 4.65894 4.74226 4.76014 4.81296 4.83029 4.87545 4.96920 4.99948 5.04464 5.12392 5.30078 5.38861 5.48904 5.52304 5.87912 6.19537 6.30794 7.07378 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.528 6.528 2 C -0.073 4.073 3 Si 0.686 3.314 4 C -0.138 4.138 5 C -0.030 4.030 6 C -0.175 4.175 7 C 0.562 3.438 8 O -0.517 6.517 9 N -0.708 5.708 10 C 0.120 3.880 11 H 0.109 0.891 12 C -0.135 4.135 13 C -0.076 4.076 14 H 0.100 0.900 15 C -0.042 4.042 16 C -0.128 4.128 17 C -0.086 4.086 18 C -0.158 4.158 19 C 0.101 3.899 20 F -0.139 7.139 21 C -0.151 4.151 22 C -0.143 4.143 23 C 0.168 3.832 24 F -0.110 7.110 25 C -0.156 4.156 26 C -0.061 4.061 27 H 0.378 0.622 28 H 0.123 0.877 29 H -0.254 1.254 30 H -0.257 1.257 31 H 0.138 0.862 32 H 0.401 0.599 33 H 0.079 0.921 34 H 0.101 0.899 35 H 0.131 0.869 36 H 0.134 0.866 37 H 0.135 0.865 38 H 0.134 0.866 39 H 0.099 0.901 40 H 0.077 0.923 41 H 0.150 0.850 42 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.764 2.565 -1.265 2.960 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.334 6.334 2 C -0.183 4.183 3 Si 0.587 3.413 4 C -0.139 4.139 5 C -0.049 4.049 6 C -0.179 4.179 7 C 0.349 3.651 8 O -0.393 6.393 9 N -0.361 5.361 10 C 0.015 3.985 11 H 0.127 0.873 12 C -0.173 4.173 13 C -0.094 4.094 14 H 0.118 0.882 15 C -0.043 4.043 16 C -0.146 4.146 17 C -0.104 4.104 18 C -0.177 4.177 19 C 0.082 3.918 20 F -0.118 7.118 21 C -0.170 4.170 22 C -0.181 4.181 23 C 0.148 3.852 24 F -0.088 7.088 25 C -0.175 4.175 26 C -0.079 4.079 27 H 0.226 0.774 28 H 0.140 0.860 29 H -0.179 1.179 30 H -0.182 1.182 31 H 0.156 0.844 32 H 0.237 0.763 33 H 0.097 0.903 34 H 0.120 0.880 35 H 0.149 0.851 36 H 0.152 0.848 37 H 0.153 0.847 38 H 0.152 0.848 39 H 0.117 0.883 40 H 0.096 0.904 41 H 0.168 0.832 42 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 0.934 2.643 -1.096 3.009 hybrid contribution -1.221 -0.119 -0.068 1.229 sum -0.287 2.524 -1.164 2.794 Atomic orbital electron populations 1.86622 1.17385 1.79955 1.49481 1.25018 0.84185 1.11197 0.97918 0.94953 0.91518 0.74197 0.80663 1.20264 1.01281 0.94480 0.97868 1.21024 0.95186 0.93806 0.94911 1.20046 1.05926 0.94534 0.97427 1.17961 0.78253 0.85854 0.83015 1.90878 1.50035 1.69878 1.28491 1.45536 1.56992 1.09578 1.23945 1.21874 0.95905 0.79746 1.01008 0.87291 1.23444 0.96231 1.02449 0.95136 1.21648 0.97455 0.95075 0.95250 0.88203 1.19511 0.97221 0.94893 0.92630 1.21107 1.01197 0.91703 1.00620 1.21045 0.97092 0.98829 0.93454 1.21219 1.03594 0.97078 0.95817 1.17739 1.00819 0.94731 0.78530 1.91524 1.89827 1.97365 1.33071 1.21051 1.03415 0.97527 0.95021 1.23583 0.97682 1.01050 0.95799 1.17758 0.93840 0.90432 0.83216 1.91634 1.85701 1.82256 1.49230 1.21178 1.03622 0.92556 1.00152 1.21156 0.94449 1.00147 0.92120 0.77414 0.85950 1.17860 1.18226 0.84406 0.76330 0.90253 0.88011 0.85101 0.84796 0.84689 0.84805 0.88313 0.90428 0.83222 0.84032 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.76 12.83 -35.23 -0.45 0.30 16 2 C -0.07 0.22 2.80 36.00 0.10 0.32 16 3 Si 0.69 -2.17 29.87 -169.99 -5.08 -7.25 16 4 C -0.14 0.34 5.34 -104.68 -0.56 -0.22 16 5 C -0.03 0.06 9.17 -39.19 -0.36 -0.30 16 6 C -0.18 -0.13 5.88 -104.91 -0.62 -0.74 16 7 C 0.56 1.29 7.77 -12.40 -0.10 1.19 16 8 O -0.52 -3.31 14.94 5.30 0.08 -3.23 16 9 N -0.71 0.67 5.21 -54.01 -0.28 0.39 16 10 C 0.12 -0.13 4.32 -67.12 -0.29 -0.42 16 11 H 0.11 0.06 7.46 -51.93 -0.39 -0.32 16 12 C -0.13 0.35 7.29 -25.92 -0.19 0.16 16 13 C -0.08 0.18 3.86 -90.96 -0.35 -0.17 16 14 H 0.10 -0.32 8.09 -51.93 -0.42 -0.74 16 15 C -0.04 0.03 5.29 -104.63 -0.55 -0.52 16 16 C -0.13 0.14 8.61 -39.58 -0.34 -0.20 16 17 C -0.09 0.07 10.04 -39.59 -0.40 -0.33 16 18 C -0.16 -0.07 10.03 -39.51 -0.40 -0.47 16 19 C 0.10 0.17 7.30 -39.42 -0.29 -0.12 16 20 F -0.14 -0.44 17.27 2.25 0.04 -0.40 16 21 C -0.15 -0.06 9.69 -39.52 -0.38 -0.44 16 22 C -0.14 0.24 7.25 -25.92 -0.19 0.06 16 23 C 0.17 0.26 7.29 -38.96 -0.28 -0.03 16 24 F -0.11 -0.48 15.55 2.25 0.04 -0.45 16 25 C -0.16 0.20 10.01 -39.56 -0.40 -0.19 16 26 C -0.06 0.16 8.66 -39.51 -0.34 -0.18 16 27 H 0.38 -1.51 8.70 45.56 0.40 -1.12 16 28 H 0.12 -0.48 7.96 -51.93 -0.41 -0.89 16 29 H -0.25 -0.14 7.11 56.52 0.40 0.27 16 30 H -0.26 0.36 7.00 56.52 0.40 0.75 16 31 H 0.14 -0.53 6.40 -52.49 -0.34 -0.86 16 32 H 0.40 -1.38 6.73 -40.82 -0.27 -1.65 16 33 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 34 H 0.10 -0.29 7.72 -51.93 -0.40 -0.69 16 35 H 0.13 -0.36 6.66 -52.49 -0.35 -0.71 16 36 H 0.13 -0.37 8.06 -52.49 -0.42 -0.80 16 37 H 0.14 -0.11 8.06 -52.49 -0.42 -0.53 16 38 H 0.13 -0.12 8.05 -52.48 -0.42 -0.55 16 39 H 0.10 -0.21 6.31 -51.93 -0.33 -0.54 16 40 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 41 H 0.15 -0.47 8.06 -52.49 -0.42 -0.89 16 42 H 0.14 -0.66 4.81 -52.49 -0.25 -0.92 16 LS Contribution 359.76 15.07 5.42 5.42 Total: 0.00 -8.49 359.76 -10.67 -19.17 By element: Atomic # 1 Polarization: -6.84 SS G_CDS: -4.51 Total: -11.34 kcal Atomic # 6 Polarization: 3.33 SS G_CDS: -5.93 Total: -2.60 kcal Atomic # 7 Polarization: 0.67 SS G_CDS: -0.28 Total: 0.39 kcal Atomic # 8 Polarization: -2.56 SS G_CDS: -0.37 Total: -2.93 kcal Atomic # 9 Polarization: -0.92 SS G_CDS: 0.07 Total: -0.85 kcal Atomic # 14 Polarization: -2.17 SS G_CDS: -5.08 Total: -7.25 kcal Total LS contribution 5.42 Total: 5.42 kcal Total: -8.49 -10.67 -19.17 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705262_12335834.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -51.660 kcal (2) G-P(sol) polarization free energy of solvation -8.493 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -60.154 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.673 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.166 kcal (6) G-S(sol) free energy of system = (1) + (5) -70.827 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds