Wall clock time and date at job start Tue Mar 9 2021 12:58:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35655 * 116.99562 * 2 1 4 4 C 1.40143 * 120.14823 * 179.97438 * 3 2 1 5 5 C 1.47533 * 120.18935 * 359.96537 * 4 3 2 6 6 O 1.21586 * 120.00337 * 0.02562 * 5 4 3 7 7 N 1.34783 * 119.99934 * 180.02562 * 5 4 3 8 8 C 1.46494 * 120.00072 * 179.97438 * 7 5 4 9 9 H 1.08999 * 112.85004 * 23.81503 * 8 7 5 10 10 C 1.53788 * 113.61186 * 155.00116 * 8 7 5 11 11 C 1.53786 * 87.07768 * 89.11910 * 10 8 7 12 12 H 1.08996 * 113.61132 * 270.88285 * 11 10 8 13 13 C 1.50703 * 113.60896 * 140.06332 * 11 10 8 14 14 C 1.38168 * 119.99145 * 299.72318 * 13 11 10 15 15 C 1.38477 * 119.97645 * 179.73163 * 14 13 11 16 16 F 1.35104 * 120.02759 * 180.25380 * 15 14 13 17 17 C 1.38441 * 119.94563 * 0.54502 * 15 14 13 18 18 C 1.38211 * 119.97357 * 359.72882 * 17 15 14 19 19 C 1.38218 * 120.02814 * 359.97438 * 18 17 15 20 20 C 1.53775 * 113.61946 * 252.49931 * 8 7 5 21 21 C 1.39709 * 119.61686 * 179.97438 * 4 3 2 22 22 C 1.37782 * 119.90703 * 0.26302 * 21 4 3 23 23 C 1.50705 * 119.85056 * 179.71949 * 22 21 4 24 24 O 1.42897 * 109.46581 * 64.99887 * 23 22 21 25 25 Si 1.86299 * 109.47028 * 184.99847 * 23 22 21 26 26 C 1.38548 * 120.30409 * 359.50937 * 22 21 4 27 27 C 1.38061 * 120.38574 * 0.46506 * 26 22 21 28 28 H 1.08999 * 109.47735 * 59.99836 * 1 2 3 29 29 H 1.09005 * 109.46854 * 179.97438 * 1 2 3 30 30 H 1.09003 * 109.46985 * 299.99351 * 1 2 3 31 31 H 0.96999 * 119.99645 * 0.02562 * 7 5 4 32 32 H 1.09002 * 113.61010 * 203.66586 * 10 8 7 33 33 H 1.08994 * 113.61200 * 334.57041 * 10 8 7 34 34 H 1.08010 * 120.01149 * 0.02562 * 14 13 11 35 35 H 1.08004 * 120.01162 * 179.75160 * 17 15 14 36 36 H 1.08001 * 119.98559 * 179.97438 * 18 17 15 37 37 H 1.08008 * 119.97666 * 179.97438 * 19 18 17 38 38 H 1.09008 * 113.61272 * 25.43551 * 20 8 7 39 39 H 1.08999 * 113.61739 * 156.33862 * 20 8 7 40 40 H 1.08002 * 120.04298 * 179.97438 * 21 4 3 41 41 H 1.09001 * 109.46813 * 305.00131 * 23 22 21 42 42 H 0.96698 * 114.00271 * 60.00390 * 24 23 22 43 43 H 1.48493 * 110.00328 * 58.68373 * 25 23 22 44 44 H 1.48500 * 109.99588 * 180.02562 * 25 23 22 45 45 H 1.07998 * 119.80899 * 180.21202 * 26 22 21 46 46 H 1.07997 * 119.95719 * 179.77088 * 27 26 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0447 1.2087 0.0000 4 6 3.4440 1.2858 0.0005 5 6 4.2549 0.0533 0.0019 6 8 3.7095 -1.0333 0.0021 7 7 5.6005 0.1319 0.0029 8 6 6.4057 -1.0919 0.0048 9 1 5.8710 -1.9510 -0.4003 10 6 7.8116 -0.9051 -0.5897 11 6 8.2762 -0.5337 0.8285 12 1 8.1885 0.5294 1.0523 13 6 9.6264 -1.0981 1.1885 14 6 9.8248 -2.4655 1.1920 15 6 11.0671 -2.9836 1.5174 16 9 11.2636 -4.3202 1.5161 17 6 12.1059 -2.1310 1.8498 18 6 11.9035 -0.7638 1.8512 19 6 10.6648 -0.2476 1.5202 20 6 7.0972 -1.3724 1.3494 21 6 4.0666 2.5365 0.0000 22 6 3.3036 3.6837 0.0044 23 6 3.9765 5.0322 0.0102 24 8 4.6991 5.2090 -1.2098 25 14 2.6881 6.3685 0.1682 26 6 1.9205 3.6034 -0.0008 27 6 1.2923 2.3740 -0.0009 28 1 -0.3634 0.5138 -0.8899 29 1 -0.3633 -1.0277 -0.0005 30 1 -0.3633 0.5137 0.8901 31 1 6.0356 0.9988 0.0032 32 1 8.2527 -1.8282 -0.9660 33 1 7.8791 -0.0819 -1.3008 34 1 9.0125 -3.1299 0.9363 35 1 13.0741 -2.5341 2.1077 36 1 12.7137 -0.0985 2.1109 37 1 10.5075 0.8210 1.5220 38 1 6.5879 -0.9263 2.2037 39 1 7.3430 -2.4231 1.5032 40 1 5.1445 2.6039 0.0008 41 1 4.6659 5.0906 0.8525 42 1 4.1476 5.1688 -2.0031 43 1 1.9085 6.1772 1.4175 44 1 3.3390 7.7032 0.1745 45 1 1.3302 4.5078 -0.0008 46 1 0.2137 2.3195 -0.0013 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705262_12496546.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:22 Heat of formation + Delta-G solvation = -61.167729 kcal Electronic energy + Delta-G solvation = -30956.497022 eV Core-core repulsion = 26500.611430 eV Total energy + Delta-G solvation = -4455.885592 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.141 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -49.77737 -41.90955 -41.24813 -39.87105 -39.23569 -38.53506 -37.19266 -34.59577 -32.77366 -31.94661 -31.58763 -31.44287 -28.63559 -26.79869 -26.60041 -26.24825 -25.12891 -23.77485 -23.00850 -22.44636 -21.53325 -20.30072 -19.46769 -18.67291 -18.37203 -18.02999 -17.30056 -17.22773 -17.04781 -16.86889 -16.72058 -16.48899 -16.28328 -15.95907 -15.89602 -15.84296 -15.38746 -15.27399 -14.84613 -14.62775 -14.60127 -14.37001 -14.17826 -13.88272 -13.74432 -13.62576 -13.45132 -13.20885 -12.98617 -12.92321 -12.49288 -12.45175 -12.21327 -12.10582 -12.03789 -11.88132 -11.74603 -11.25493 -10.87078 -10.46795 -10.27040 -10.02894 -9.88854 -9.61343 -9.31715 -5.13801 -0.28974 0.15602 0.16411 0.21228 1.19034 1.53760 1.83247 1.89064 2.07949 2.19189 2.54694 2.69130 3.22170 3.33345 3.41305 3.46133 3.55346 3.56772 3.62048 3.65124 3.75979 3.87944 3.92710 4.01991 4.03815 4.12033 4.16860 4.17862 4.19435 4.29579 4.37398 4.43149 4.54304 4.57304 4.61479 4.65619 4.77373 4.82789 4.84364 4.87533 4.95048 5.01670 5.07268 5.08897 5.15900 5.19598 5.32960 5.45533 5.48994 5.61635 5.91222 6.25500 6.46995 6.52964 7.32149 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.279 6.279 3 C 0.193 3.807 4 C -0.175 4.175 5 C 0.564 3.436 6 O -0.513 6.513 7 N -0.714 5.714 8 C 0.123 3.877 9 H 0.108 0.892 10 C -0.135 4.135 11 C -0.076 4.076 12 H 0.101 0.899 13 C -0.042 4.042 14 C -0.152 4.152 15 C 0.102 3.898 16 F -0.139 7.139 17 C -0.159 4.159 18 C -0.087 4.087 19 C -0.127 4.127 20 C -0.145 4.145 21 C -0.019 4.019 22 C -0.169 4.169 23 C -0.062 4.062 24 O -0.540 6.540 25 Si 0.683 3.317 26 C -0.045 4.045 27 C -0.214 4.214 28 H 0.059 0.941 29 H 0.105 0.895 30 H 0.058 0.942 31 H 0.399 0.601 32 H 0.099 0.901 33 H 0.079 0.921 34 H 0.136 0.864 35 H 0.135 0.865 36 H 0.133 0.867 37 H 0.129 0.871 38 H 0.076 0.924 39 H 0.096 0.904 40 H 0.135 0.865 41 H 0.114 0.886 42 H 0.380 0.620 43 H -0.257 1.257 44 H -0.253 1.253 45 H 0.134 0.866 46 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.326 5.078 -1.703 5.839 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.189 6.189 3 C 0.145 3.855 4 C -0.179 4.179 5 C 0.352 3.648 6 O -0.388 6.388 7 N -0.367 5.367 8 C 0.017 3.983 9 H 0.126 0.874 10 C -0.173 4.173 11 C -0.094 4.094 12 H 0.119 0.881 13 C -0.042 4.042 14 C -0.171 4.171 15 C 0.083 3.917 16 F -0.118 7.118 17 C -0.178 4.178 18 C -0.105 4.105 19 C -0.145 4.145 20 C -0.183 4.183 21 C -0.038 4.038 22 C -0.170 4.170 23 C -0.173 4.173 24 O -0.346 6.346 25 Si 0.585 3.415 26 C -0.063 4.063 27 C -0.232 4.232 28 H 0.078 0.922 29 H 0.124 0.876 30 H 0.077 0.923 31 H 0.234 0.766 32 H 0.118 0.882 33 H 0.098 0.902 34 H 0.154 0.846 35 H 0.153 0.847 36 H 0.151 0.849 37 H 0.147 0.853 38 H 0.095 0.905 39 H 0.114 0.886 40 H 0.152 0.848 41 H 0.132 0.868 42 H 0.227 0.773 43 H -0.182 1.182 44 H -0.178 1.178 45 H 0.151 0.849 46 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -2.460 4.733 -0.812 5.396 hybrid contribution 0.497 -0.041 0.406 0.643 sum -1.964 4.693 -0.405 5.103 Atomic orbital electron populations 1.23242 0.78142 1.04802 1.01462 1.86385 1.21239 1.25159 1.86136 1.19092 0.90930 0.85090 0.90435 1.19314 0.90894 0.93821 1.13831 1.17942 0.81739 0.88699 0.76426 1.90850 1.71425 1.28579 1.47934 1.45567 1.05745 1.09029 1.76316 1.21809 0.91085 0.88601 0.96794 0.87442 1.23441 0.94671 1.03414 0.95814 1.21647 0.90598 1.00077 0.97057 0.88063 1.19524 0.95265 0.92235 0.97161 1.21002 0.96269 0.95974 1.03868 1.17712 0.94786 0.77353 1.01888 1.91525 1.95699 1.30439 1.94099 1.21209 0.99125 0.93914 1.03527 1.21044 0.97496 0.94277 0.97722 1.21149 0.92742 1.00117 1.00522 1.23588 0.95553 1.01073 0.98122 1.20958 0.99832 0.89868 0.93155 1.20120 0.93555 0.96040 1.07259 1.24957 1.03108 0.98943 0.90261 1.86503 1.37936 1.95054 1.15095 0.94834 0.81183 0.77731 0.87741 1.20977 0.93608 0.97256 0.94481 1.21240 1.00786 0.91552 1.09661 0.92224 0.87640 0.92330 0.76568 0.88225 0.90210 0.84577 0.84714 0.84874 0.85331 0.90503 0.88578 0.84775 0.86850 0.77268 1.18175 1.17804 0.84860 0.84080 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.28 -0.90 8.57 -40.54 -0.35 -1.24 16 3 C 0.19 0.38 6.70 -38.69 -0.26 0.12 16 4 C -0.17 -0.31 5.89 -104.84 -0.62 -0.93 16 5 C 0.56 1.84 7.76 -12.47 -0.10 1.74 16 6 O -0.51 -3.66 14.76 -16.59 -0.24 -3.91 16 7 N -0.71 -0.03 5.21 -54.06 -0.28 -0.31 16 8 C 0.12 -0.01 4.32 -67.12 -0.29 -0.30 16 9 H 0.11 0.18 7.46 -51.93 -0.39 -0.21 16 10 C -0.14 0.24 7.29 -25.91 -0.19 0.05 16 11 C -0.08 0.12 3.85 -90.96 -0.35 -0.23 16 12 H 0.10 -0.28 8.09 -51.93 -0.42 -0.70 16 13 C -0.04 0.01 5.29 -104.63 -0.55 -0.54 16 14 C -0.15 -0.12 8.60 -39.52 -0.34 -0.46 16 15 C 0.10 0.21 7.30 -39.42 -0.29 -0.08 16 16 F -0.14 -0.49 17.27 2.25 0.04 -0.45 16 17 C -0.16 -0.13 10.03 -39.52 -0.40 -0.53 16 18 C -0.09 0.03 10.04 -39.60 -0.40 -0.37 16 19 C -0.13 0.07 9.71 -39.58 -0.38 -0.31 16 20 C -0.14 0.09 7.25 -25.92 -0.19 -0.10 16 21 C -0.02 0.01 9.16 -39.20 -0.36 -0.35 16 22 C -0.17 0.22 5.35 -104.67 -0.56 -0.34 16 23 C -0.06 0.12 2.79 36.01 0.10 0.22 16 24 O -0.54 0.81 12.83 -35.23 -0.45 0.36 16 25 Si 0.68 -1.58 29.79 -169.99 -5.06 -6.65 16 26 C -0.05 0.08 8.65 -39.53 -0.34 -0.26 16 27 C -0.21 0.16 9.03 -39.47 -0.36 -0.20 16 28 H 0.06 -0.16 7.66 -51.93 -0.40 -0.56 16 29 H 0.11 -0.21 8.14 -51.93 -0.42 -0.63 16 30 H 0.06 -0.15 7.66 -51.93 -0.40 -0.54 16 31 H 0.40 -0.96 6.73 -40.82 -0.27 -1.23 16 32 H 0.10 -0.17 7.73 -51.93 -0.40 -0.57 16 33 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 34 H 0.14 -0.03 6.65 -52.48 -0.35 -0.38 16 35 H 0.13 -0.06 8.06 -52.48 -0.42 -0.49 16 36 H 0.13 -0.32 8.06 -52.49 -0.42 -0.75 16 37 H 0.13 -0.31 8.05 -52.48 -0.42 -0.73 16 38 H 0.08 0.02 8.14 -51.92 -0.42 -0.40 16 39 H 0.10 -0.07 6.31 -51.93 -0.33 -0.39 16 40 H 0.13 -0.33 6.40 -52.49 -0.34 -0.67 16 41 H 0.11 -0.19 7.96 -51.93 -0.41 -0.60 16 42 H 0.38 -1.93 8.70 45.56 0.40 -1.53 16 43 H -0.26 -0.03 7.11 56.52 0.40 0.38 16 44 H -0.25 -0.29 7.11 56.52 0.40 0.11 16 45 H 0.13 -0.54 4.88 -52.49 -0.26 -0.80 16 46 H 0.14 -0.42 6.30 -52.49 -0.33 -0.75 16 LS Contribution 382.61 15.07 5.77 5.77 Total: 0.00 -9.32 382.61 -11.09 -20.41 By element: Atomic # 1 Polarization: -6.43 SS G_CDS: -5.63 Total: -12.06 kcal Atomic # 6 Polarization: 2.97 SS G_CDS: -4.88 Total: -1.91 kcal Atomic # 7 Polarization: -0.03 SS G_CDS: -0.28 Total: -0.31 kcal Atomic # 8 Polarization: -3.75 SS G_CDS: -1.04 Total: -4.80 kcal Atomic # 9 Polarization: -0.49 SS G_CDS: 0.04 Total: -0.45 kcal Atomic # 14 Polarization: -1.58 SS G_CDS: -5.06 Total: -6.65 kcal Total LS contribution 5.77 Total: 5.77 kcal Total: -9.32 -11.09 -20.41 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705262_12496546.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -40.759 kcal (2) G-P(sol) polarization free energy of solvation -9.319 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -50.078 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.090 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.408 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.168 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds