Wall clock time and date at job start Tue Mar 9 2021 12:58:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35655 * 116.99562 * 2 1 4 4 C 1.40143 * 120.14823 * 179.97438 * 3 2 1 5 5 C 1.47533 * 120.18935 * 359.96537 * 4 3 2 6 6 O 1.21586 * 120.00337 * 0.02562 * 5 4 3 7 7 N 1.34783 * 119.99934 * 180.02562 * 5 4 3 8 8 C 1.46494 * 120.00072 * 179.97438 * 7 5 4 9 9 H 1.08999 * 112.85004 * 23.81503 * 8 7 5 10 10 C 1.53788 * 113.61186 * 155.00116 * 8 7 5 11 11 C 1.53786 * 87.07768 * 89.11910 * 10 8 7 12 12 H 1.08996 * 113.61132 * 270.88285 * 11 10 8 13 13 C 1.50703 * 113.60896 * 140.06332 * 11 10 8 14 14 C 1.38168 * 119.99145 * 299.72318 * 13 11 10 15 15 C 1.38477 * 119.97645 * 179.73163 * 14 13 11 16 16 F 1.35104 * 120.02759 * 180.25380 * 15 14 13 17 17 C 1.38441 * 119.94563 * 0.54502 * 15 14 13 18 18 C 1.38211 * 119.97357 * 359.72882 * 17 15 14 19 19 C 1.38218 * 120.02814 * 359.97438 * 18 17 15 20 20 C 1.53775 * 113.61946 * 252.49931 * 8 7 5 21 21 C 1.39709 * 119.61686 * 179.97438 * 4 3 2 22 22 C 1.37782 * 119.90703 * 0.26302 * 21 4 3 23 23 C 1.50705 * 119.85056 * 179.71949 * 22 21 4 24 24 O 1.42897 * 109.46581 * 64.99887 * 23 22 21 25 25 Si 1.86299 * 109.47028 * 184.99847 * 23 22 21 26 26 C 1.38548 * 120.30409 * 359.50937 * 22 21 4 27 27 C 1.38061 * 120.38574 * 0.46506 * 26 22 21 28 28 H 1.08999 * 109.47735 * 59.99836 * 1 2 3 29 29 H 1.09005 * 109.46854 * 179.97438 * 1 2 3 30 30 H 1.09003 * 109.46985 * 299.99351 * 1 2 3 31 31 H 0.96999 * 119.99645 * 0.02562 * 7 5 4 32 32 H 1.09002 * 113.61010 * 203.66586 * 10 8 7 33 33 H 1.08994 * 113.61200 * 334.57041 * 10 8 7 34 34 H 1.08010 * 120.01149 * 0.02562 * 14 13 11 35 35 H 1.08004 * 120.01162 * 179.75160 * 17 15 14 36 36 H 1.08001 * 119.98559 * 179.97438 * 18 17 15 37 37 H 1.08008 * 119.97666 * 179.97438 * 19 18 17 38 38 H 1.09008 * 113.61272 * 25.43551 * 20 8 7 39 39 H 1.08999 * 113.61739 * 156.33862 * 20 8 7 40 40 H 1.08002 * 120.04298 * 179.97438 * 21 4 3 41 41 H 1.09001 * 109.46813 * 305.00131 * 23 22 21 42 42 H 0.96698 * 114.00271 * 60.00390 * 24 23 22 43 43 H 1.48493 * 110.00328 * 58.68373 * 25 23 22 44 44 H 1.48500 * 109.99588 * 180.02562 * 25 23 22 45 45 H 1.07998 * 119.80899 * 180.21202 * 26 22 21 46 46 H 1.07997 * 119.95719 * 179.77088 * 27 26 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0447 1.2087 0.0000 4 6 3.4440 1.2858 0.0005 5 6 4.2549 0.0533 0.0019 6 8 3.7095 -1.0333 0.0021 7 7 5.6005 0.1319 0.0029 8 6 6.4057 -1.0919 0.0048 9 1 5.8710 -1.9510 -0.4003 10 6 7.8116 -0.9051 -0.5897 11 6 8.2762 -0.5337 0.8285 12 1 8.1885 0.5294 1.0523 13 6 9.6264 -1.0981 1.1885 14 6 9.8248 -2.4655 1.1920 15 6 11.0671 -2.9836 1.5174 16 9 11.2636 -4.3202 1.5161 17 6 12.1059 -2.1310 1.8498 18 6 11.9035 -0.7638 1.8512 19 6 10.6648 -0.2476 1.5202 20 6 7.0972 -1.3724 1.3494 21 6 4.0666 2.5365 0.0000 22 6 3.3036 3.6837 0.0044 23 6 3.9765 5.0322 0.0102 24 8 4.6991 5.2090 -1.2098 25 14 2.6881 6.3685 0.1682 26 6 1.9205 3.6034 -0.0008 27 6 1.2923 2.3740 -0.0009 28 1 -0.3634 0.5138 -0.8899 29 1 -0.3633 -1.0277 -0.0005 30 1 -0.3633 0.5137 0.8901 31 1 6.0356 0.9988 0.0032 32 1 8.2527 -1.8282 -0.9660 33 1 7.8791 -0.0819 -1.3008 34 1 9.0125 -3.1299 0.9363 35 1 13.0741 -2.5341 2.1077 36 1 12.7137 -0.0985 2.1109 37 1 10.5075 0.8210 1.5220 38 1 6.5879 -0.9263 2.2037 39 1 7.3430 -2.4231 1.5032 40 1 5.1445 2.6039 0.0008 41 1 4.6659 5.0906 0.8525 42 1 4.1476 5.1688 -2.0031 43 1 1.9085 6.1772 1.4175 44 1 3.3390 7.7032 0.1745 45 1 1.3302 4.5078 -0.0008 46 1 0.2137 2.3195 -0.0013 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705262_12496546.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:21 Heat of formation + Delta-G solvation = -58.194562 kcal Electronic energy + Delta-G solvation = -30956.368095 eV Core-core repulsion = 26500.611430 eV Total energy + Delta-G solvation = -4455.756666 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.141 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -49.94306 -41.93368 -41.21293 -39.94880 -39.17481 -38.59394 -37.08333 -34.71478 -32.73924 -31.87362 -31.56670 -31.43050 -28.53008 -26.74607 -26.59282 -26.13462 -25.12149 -23.76411 -22.98292 -22.42391 -21.57943 -20.30599 -19.43514 -18.70071 -18.28623 -18.05412 -17.29148 -17.20628 -17.06118 -16.86776 -16.74841 -16.64942 -16.19197 -15.95464 -15.85283 -15.81744 -15.44374 -15.22689 -14.79552 -14.58597 -14.52434 -14.42900 -14.20010 -13.90284 -13.65122 -13.55052 -13.39561 -13.09680 -12.95915 -12.93791 -12.47802 -12.42110 -12.13303 -12.01302 -11.98235 -11.79536 -11.71945 -11.23135 -11.03439 -10.37203 -10.28497 -10.04915 -9.89640 -9.63104 -9.28742 -4.96420 -0.26525 0.15485 0.21602 0.22316 1.35567 1.67138 1.75934 2.00910 2.04130 2.27362 2.55878 2.67915 3.20667 3.45073 3.49404 3.57084 3.61203 3.67105 3.70251 3.77424 3.80739 3.92812 3.99093 4.05194 4.15921 4.21892 4.26137 4.30673 4.36339 4.40012 4.40849 4.57337 4.60433 4.68358 4.72354 4.73502 4.81576 4.86435 4.91167 4.94119 4.97993 5.09048 5.10395 5.13232 5.17342 5.28468 5.36082 5.49319 5.57171 5.61907 5.92521 6.30178 6.50407 6.83068 7.20217 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.011 3.989 2 O -0.314 6.314 3 C 0.170 3.830 4 C -0.197 4.197 5 C 0.559 3.441 6 O -0.564 6.564 7 N -0.698 5.698 8 C 0.116 3.884 9 H 0.083 0.917 10 C -0.124 4.124 11 C -0.064 4.064 12 H 0.121 0.879 13 C -0.045 4.045 14 C -0.160 4.160 15 C 0.072 3.928 16 F -0.155 7.155 17 C -0.168 4.168 18 C -0.090 4.090 19 C -0.126 4.126 20 C -0.145 4.145 21 C -0.016 4.016 22 C -0.168 4.168 23 C -0.062 4.062 24 O -0.553 6.553 25 Si 0.767 3.233 26 C -0.041 4.041 27 C -0.212 4.212 28 H 0.076 0.924 29 H 0.106 0.894 30 H 0.072 0.928 31 H 0.413 0.587 32 H 0.098 0.902 33 H 0.093 0.907 34 H 0.138 0.862 35 H 0.142 0.858 36 H 0.156 0.844 37 H 0.153 0.847 38 H 0.068 0.932 39 H 0.092 0.908 40 H 0.152 0.848 41 H 0.114 0.886 42 H 0.396 0.604 43 H -0.286 1.286 44 H -0.302 1.302 45 H 0.159 0.841 46 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.184 7.589 -1.987 8.144 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.083 4.083 2 O -0.225 6.225 3 C 0.122 3.878 4 C -0.201 4.201 5 C 0.348 3.652 6 O -0.443 6.443 7 N -0.351 5.351 8 C 0.011 3.989 9 H 0.101 0.899 10 C -0.162 4.162 11 C -0.082 4.082 12 H 0.139 0.861 13 C -0.046 4.046 14 C -0.179 4.179 15 C 0.053 3.947 16 F -0.134 7.134 17 C -0.187 4.187 18 C -0.107 4.107 19 C -0.144 4.144 20 C -0.183 4.183 21 C -0.034 4.034 22 C -0.168 4.168 23 C -0.172 4.172 24 O -0.361 6.361 25 Si 0.674 3.326 26 C -0.058 4.058 27 C -0.231 4.231 28 H 0.094 0.906 29 H 0.124 0.876 30 H 0.090 0.910 31 H 0.251 0.749 32 H 0.116 0.884 33 H 0.111 0.889 34 H 0.155 0.845 35 H 0.160 0.840 36 H 0.174 0.826 37 H 0.171 0.829 38 H 0.087 0.913 39 H 0.111 0.889 40 H 0.169 0.831 41 H 0.131 0.869 42 H 0.246 0.754 43 H -0.212 1.212 44 H -0.231 1.231 45 H 0.176 0.824 46 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges -2.293 7.251 -1.119 7.687 hybrid contribution 0.457 -0.742 0.511 1.010 sum -1.836 6.509 -0.608 6.791 Atomic orbital electron populations 1.23446 0.76535 1.05434 1.02885 1.86338 1.23202 1.26455 1.86553 1.19436 0.91374 0.85573 0.91433 1.19386 0.91114 0.93912 1.15661 1.18319 0.82573 0.88674 0.75652 1.90814 1.72466 1.30394 1.50640 1.45443 1.04915 1.09760 1.74989 1.21814 0.91575 0.87998 0.97545 0.89868 1.23374 0.92819 1.03887 0.96118 1.21638 0.89234 1.00731 0.96556 0.86068 1.19682 0.96052 0.91791 0.97040 1.21127 0.95978 0.96801 1.03993 1.18042 0.95914 0.76958 1.03748 1.91476 1.95854 1.31624 1.94449 1.21427 0.99186 0.94585 1.03506 1.21362 0.98397 0.93939 0.97051 1.21493 0.92316 1.01327 0.99218 1.23561 0.96105 1.01231 0.97445 1.21111 1.00764 0.89116 0.92437 1.20254 0.93850 0.96019 1.06722 1.25018 1.03216 0.98575 0.90417 1.86473 1.38858 1.94976 1.15829 0.93880 0.79031 0.74121 0.85574 1.21283 0.93701 0.97818 0.93006 1.21480 1.01799 0.90903 1.08899 0.90586 0.87563 0.90994 0.74923 0.88361 0.88869 0.84469 0.84011 0.82594 0.82888 0.91275 0.88940 0.83095 0.86910 0.75429 1.21246 1.23053 0.82385 0.81994 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.02 9.81 113.37 1.11 1.09 16 2 O -0.31 -2.57 8.57 -68.79 -0.59 -3.16 16 3 C 0.17 0.79 6.70 22.84 0.15 0.95 16 4 C -0.20 -0.85 5.89 -20.01 -0.12 -0.97 16 5 C 0.56 4.61 7.76 86.69 0.67 5.28 16 6 O -0.56 -9.79 14.76 16.93 0.25 -9.54 16 7 N -0.70 -0.51 5.21 -443.21 -2.31 -2.82 16 8 C 0.12 0.11 4.32 45.52 0.20 0.31 16 9 H 0.08 0.51 7.46 -2.39 -0.02 0.50 16 10 C -0.12 0.46 7.29 31.12 0.23 0.69 16 11 C -0.06 0.26 3.85 -11.01 -0.04 0.22 16 12 H 0.12 -0.94 8.09 -2.39 -0.02 -0.96 16 13 C -0.05 0.04 5.29 -19.87 -0.11 -0.06 16 14 C -0.16 -0.41 8.60 22.31 0.19 -0.21 16 15 C 0.07 0.39 7.30 22.38 0.16 0.55 16 16 F -0.16 -1.41 17.27 44.97 0.78 -0.63 16 17 C -0.17 -0.33 10.03 22.31 0.22 -0.11 16 18 C -0.09 0.17 10.04 22.26 0.22 0.39 16 19 C -0.13 0.35 9.71 22.27 0.22 0.56 16 20 C -0.14 0.04 7.25 31.12 0.23 0.27 16 21 C -0.02 0.03 9.16 22.52 0.21 0.24 16 22 C -0.17 0.67 5.35 -19.90 -0.11 0.57 16 23 C -0.06 0.33 2.79 71.24 0.20 0.53 16 24 O -0.55 2.68 12.83 -148.98 -1.91 0.77 16 25 Si 0.77 -4.54 29.79 68.60 2.04 -2.49 16 26 C -0.04 0.21 8.65 22.30 0.19 0.40 16 27 C -0.21 0.48 9.03 22.34 0.20 0.69 16 28 H 0.08 -0.42 7.66 -2.39 -0.02 -0.44 16 29 H 0.11 -0.28 8.14 -2.38 -0.02 -0.30 16 30 H 0.07 -0.35 7.66 -2.39 -0.02 -0.37 16 31 H 0.41 -2.25 6.73 -92.71 -0.62 -2.87 16 32 H 0.10 -0.30 7.73 -2.39 -0.02 -0.32 16 33 H 0.09 -0.56 8.14 -2.39 -0.02 -0.58 16 34 H 0.14 0.17 6.65 -2.91 -0.02 0.16 16 35 H 0.14 -0.07 8.06 -2.91 -0.02 -0.09 16 36 H 0.16 -1.07 8.06 -2.91 -0.02 -1.10 16 37 H 0.15 -1.20 8.05 -2.91 -0.02 -1.22 16 38 H 0.07 0.10 8.14 -2.38 -0.02 0.08 16 39 H 0.09 0.03 6.31 -2.39 -0.02 0.02 16 40 H 0.15 -0.96 6.40 -2.91 -0.02 -0.98 16 41 H 0.11 -0.57 7.96 -2.39 -0.02 -0.58 16 42 H 0.40 -4.84 8.70 -74.06 -0.64 -5.48 16 43 H -0.29 0.28 7.11 99.48 0.71 0.99 16 44 H -0.30 -0.75 7.11 99.48 0.71 -0.04 16 45 H 0.16 -1.68 4.88 -2.91 -0.01 -1.70 16 46 H 0.16 -1.19 6.30 -2.91 -0.02 -1.21 16 Total: 0.00 -25.12 382.61 2.11 -23.00 By element: Atomic # 1 Polarization: -16.32 SS G_CDS: -0.18 Total: -16.50 kcal Atomic # 6 Polarization: 7.35 SS G_CDS: 4.04 Total: 11.38 kcal Atomic # 7 Polarization: -0.51 SS G_CDS: -2.31 Total: -2.82 kcal Atomic # 8 Polarization: -9.69 SS G_CDS: -2.25 Total: -11.94 kcal Atomic # 9 Polarization: -1.41 SS G_CDS: 0.78 Total: -0.63 kcal Atomic # 14 Polarization: -4.54 SS G_CDS: 2.04 Total: -2.49 kcal Total: -25.12 2.11 -23.00 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705262_12496546.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -35.194 kcal (2) G-P(sol) polarization free energy of solvation -25.115 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -60.309 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.114 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.001 kcal (6) G-S(sol) free energy of system = (1) + (5) -58.195 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds