Wall clock time and date at job start Tue Mar 9 2021 12:58:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86297 * 109.47543 * 2 1 4 4 C 1.50700 * 109.46901 * 239.99871 * 2 1 3 5 5 C 1.38628 * 119.94223 * 75.02427 * 4 2 1 6 6 F 1.35098 * 119.88378 * 0.02562 * 5 4 2 7 7 C 1.38681 * 120.24037 * 180.02562 * 5 4 2 8 8 C 1.37819 * 120.11640 * 359.68039 * 7 5 4 9 9 C 1.39662 * 119.87811 * 0.56959 * 8 7 5 10 10 C 1.47726 * 120.11681 * 179.71833 * 9 8 7 11 11 O 1.21567 * 120.00283 * 179.72603 * 10 9 8 12 12 N 1.34779 * 120.00001 * 359.73246 * 10 9 8 13 13 C 1.46496 * 119.99980 * 179.97438 * 12 10 9 14 14 H 1.09003 * 112.85280 * 23.80850 * 13 12 10 15 15 C 1.53782 * 113.61431 * 154.99958 * 13 12 10 16 16 C 1.53784 * 87.07843 * 89.20175 * 15 13 12 17 17 H 1.09001 * 113.61514 * 270.79370 * 16 15 13 18 18 C 1.50698 * 113.61169 * 139.98513 * 16 15 13 19 19 C 1.38230 * 119.99130 * 120.00064 * 18 16 15 20 20 C 1.38265 * 120.05232 * 179.97438 * 19 18 16 21 21 C 1.38170 * 120.02652 * 359.97438 * 20 19 18 22 22 C 1.38476 * 119.97701 * 0.02562 * 21 20 19 23 23 F 1.35097 * 120.02992 * 180.02562 * 22 21 20 24 24 C 1.38222 * 119.99003 * 299.97440 * 18 16 15 25 25 C 1.53772 * 87.08286 * 25.43489 * 16 15 13 26 26 C 1.37859 * 119.93634 * 254.99897 * 4 2 1 27 27 H 0.96698 * 113.99913 * 59.99639 * 1 2 3 28 28 H 1.09000 * 109.47027 * 119.99957 * 2 1 3 29 29 H 1.48504 * 109.99704 * 298.68022 * 3 2 1 30 30 H 1.48500 * 110.00083 * 59.99965 * 3 2 1 31 31 H 1.08002 * 119.94273 * 180.02562 * 7 5 4 32 32 H 1.07999 * 120.05900 * 180.31854 * 8 7 5 33 33 H 0.97000 * 119.99868 * 359.97438 * 12 10 9 34 34 H 1.09006 * 113.61444 * 334.65370 * 15 13 12 35 35 H 1.08997 * 113.69426 * 203.76179 * 15 13 12 36 36 H 1.07993 * 119.96947 * 0.24789 * 19 18 16 37 37 H 1.07999 * 119.98131 * 179.97438 * 20 19 18 38 38 H 1.08001 * 120.01118 * 179.97438 * 21 20 19 39 39 H 1.08010 * 120.00651 * 0.04205 * 24 18 16 40 40 H 1.08995 * 113.61684 * 89.11363 * 25 16 15 41 41 H 1.09001 * 113.61529 * 220.02253 * 25 16 15 42 42 H 1.07990 * 120.06468 * 359.97438 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.8692 -0.0834 -2.4653 6 9 1.3588 1.1637 -2.5620 7 6 2.3292 -0.7317 -3.6017 8 6 2.8569 -2.0014 -3.5077 9 6 2.9169 -2.6398 -2.2670 10 6 3.4758 -4.0031 -2.1612 11 8 3.5316 -4.5549 -1.0794 12 7 3.9238 -4.6352 -3.2640 13 6 4.4786 -5.9871 -3.1589 14 1 4.1177 -6.5258 -2.2828 15 6 4.3806 -6.7962 -4.4630 16 6 5.7509 -6.2078 -4.8386 17 1 5.6873 -5.2626 -5.3777 18 6 6.6720 -7.1989 -5.5021 19 6 7.1442 -6.9563 -6.7784 20 6 7.9898 -7.8646 -7.3881 21 6 8.3643 -9.0157 -6.7219 22 6 7.8919 -9.2598 -5.4433 23 9 8.2578 -10.3848 -4.7907 24 6 7.0449 -8.3500 -4.8340 25 6 6.0057 -6.0435 -3.3311 26 6 2.4521 -1.9826 -1.1259 27 1 -0.3933 0.4417 -0.7650 28 1 1.7923 -0.5138 0.8900 29 1 1.5880 2.4585 -1.2243 30 1 1.5616 2.4679 1.2085 31 1 2.2789 -0.2385 -4.5612 32 1 3.2195 -2.5033 -4.3925 33 1 3.8790 -4.1951 -4.1272 34 1 3.5718 -6.4722 -5.1182 35 1 4.3956 -7.8754 -4.3111 36 1 6.8558 -6.0545 -7.2979 37 1 8.3577 -7.6741 -8.3854 38 1 9.0245 -9.7251 -7.1985 39 1 6.6756 -8.5395 -3.8368 40 1 6.4652 -6.9167 -2.8682 41 1 6.5089 -5.1118 -3.0723 42 1 2.5007 -2.4699 -0.1634 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705262_12496548.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:25 Heat of formation + Delta-G solvation = -59.623002 kcal Electronic energy + Delta-G solvation = -28616.145019 eV Core-core repulsion = 24165.092247 eV Total energy + Delta-G solvation = -4451.052772 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.117 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -50.46432 -49.91870 -41.77693 -40.79777 -39.67814 -38.61380 -37.80007 -34.82163 -32.91692 -32.19086 -31.50154 -31.34246 -27.07766 -26.69636 -26.51771 -24.92871 -23.67289 -23.50829 -22.67923 -21.64649 -20.29795 -19.28595 -18.92189 -18.49155 -17.90760 -17.87509 -17.25205 -17.14300 -17.03304 -16.93166 -16.62692 -16.23524 -16.11890 -15.70357 -15.57538 -15.49379 -15.03230 -14.81168 -14.72597 -14.65530 -14.18470 -14.03377 -13.88284 -13.85521 -13.51144 -13.35363 -12.99785 -12.91433 -12.89619 -12.44754 -12.35256 -11.94607 -11.68043 -11.35328 -11.21719 -11.19044 -10.86990 -10.22952 -10.11066 -9.88089 -9.80162 -9.59322 -4.97264 -0.51209 0.03097 0.19143 0.25121 1.19483 1.56130 1.58494 1.92432 1.99392 2.55622 2.60058 2.97909 3.23336 3.24790 3.44953 3.49680 3.53740 3.61076 3.65761 3.72221 3.84121 3.97297 3.98359 4.08756 4.11932 4.26109 4.30829 4.32587 4.44519 4.61885 4.66494 4.77757 4.77997 4.84362 4.88312 4.92174 4.95987 5.00857 5.03892 5.09382 5.13952 5.15566 5.20714 5.39168 5.49974 5.60346 5.65126 5.96347 6.30663 6.44537 7.12146 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.084 4.084 3 Si 0.750 3.250 4 C -0.156 4.156 5 C 0.109 3.891 6 F -0.131 7.131 7 C -0.146 4.146 8 C -0.038 4.038 9 C -0.152 4.152 10 C 0.562 3.438 11 O -0.576 6.576 12 N -0.690 5.690 13 C 0.115 3.885 14 H 0.084 0.916 15 C -0.126 4.126 16 C -0.063 4.063 17 H 0.128 0.872 18 C -0.046 4.046 19 C -0.124 4.124 20 C -0.091 4.091 21 C -0.170 4.170 22 C 0.070 3.930 23 F -0.157 7.157 24 C -0.161 4.161 25 C -0.145 4.145 26 C -0.022 4.022 27 H 0.384 0.616 28 H 0.129 0.871 29 H -0.251 1.251 30 H -0.308 1.308 31 H 0.173 0.827 32 H 0.177 0.823 33 H 0.418 0.582 34 H 0.096 0.904 35 H 0.094 0.906 36 H 0.157 0.843 37 H 0.155 0.845 38 H 0.139 0.861 39 H 0.137 0.863 40 H 0.090 0.910 41 H 0.074 0.926 42 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.390 2.679 -8.704 9.415 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.192 4.192 3 Si 0.654 3.346 4 C -0.157 4.157 5 C 0.089 3.911 6 F -0.109 7.109 7 C -0.164 4.164 8 C -0.056 4.056 9 C -0.155 4.155 10 C 0.351 3.649 11 O -0.457 6.457 12 N -0.342 5.342 13 C 0.009 3.991 14 H 0.102 0.898 15 C -0.164 4.164 16 C -0.081 4.081 17 H 0.146 0.854 18 C -0.046 4.046 19 C -0.142 4.142 20 C -0.109 4.109 21 C -0.189 4.189 22 C 0.051 3.949 23 F -0.136 7.136 24 C -0.179 4.179 25 C -0.184 4.184 26 C -0.041 4.041 27 H 0.233 0.767 28 H 0.147 0.853 29 H -0.176 1.176 30 H -0.237 1.237 31 H 0.190 0.810 32 H 0.195 0.805 33 H 0.257 0.743 34 H 0.114 0.886 35 H 0.113 0.887 36 H 0.175 0.825 37 H 0.173 0.827 38 H 0.157 0.843 39 H 0.155 0.845 40 H 0.108 0.892 41 H 0.093 0.907 42 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges 2.307 2.788 -7.401 8.238 hybrid contribution -1.066 -0.374 -0.156 1.140 sum 1.241 2.414 -7.557 8.029 Atomic orbital electron populations 1.86624 1.18177 1.80280 1.50081 1.25168 0.83574 1.12158 0.98331 0.94644 0.90262 0.72706 0.77005 1.20129 1.04654 0.96359 0.94565 1.18134 0.97685 0.80341 0.94926 1.91555 1.84724 1.38198 1.96436 1.21421 1.00488 0.95985 0.98553 1.21526 0.93898 0.93329 0.96869 1.19955 1.05537 0.94671 0.95368 1.18364 0.76924 0.85620 0.83996 1.90808 1.57658 1.68135 1.29052 1.45394 1.62011 1.16444 1.10398 1.21845 0.94336 0.83003 0.99904 0.89799 1.23381 0.97127 1.00500 0.95378 1.21686 0.93534 0.98013 0.94897 0.85363 1.19725 0.96680 0.93918 0.94262 1.21513 0.97373 1.00739 0.94545 1.21370 0.96321 0.92338 1.00838 1.21420 1.03114 1.00670 0.93697 1.18072 0.99826 0.84357 0.92628 1.91472 1.90530 1.50150 1.81403 1.21146 0.99954 0.95036 1.01807 1.23560 0.95881 1.03268 0.95646 1.21019 0.92199 0.91602 0.99291 0.76729 0.85329 1.17617 1.23668 0.80965 0.80543 0.74299 0.88583 0.88704 0.82539 0.82700 0.84287 0.84486 0.89205 0.90677 0.84416 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -2.49 12.88 -148.98 -1.92 -4.41 16 2 C -0.08 -0.08 2.80 71.24 0.20 0.12 16 3 Si 0.75 0.06 30.81 68.60 2.11 2.18 16 4 C -0.16 0.05 4.78 -19.86 -0.09 -0.05 16 5 C 0.11 -0.23 6.63 22.47 0.15 -0.08 16 6 F -0.13 -0.05 12.57 44.97 0.57 0.51 16 7 C -0.15 1.08 10.01 22.28 0.22 1.31 16 8 C -0.04 0.34 9.54 22.51 0.21 0.55 16 9 C -0.15 0.32 5.87 -20.09 -0.12 0.20 16 10 C 0.56 0.75 7.77 86.75 0.67 1.42 16 11 O -0.58 -6.33 15.94 -3.93 -0.06 -6.39 16 12 N -0.69 4.11 5.22 -443.01 -2.31 1.80 16 13 C 0.11 -0.47 4.32 45.52 0.20 -0.28 16 14 H 0.08 0.12 7.46 -2.39 -0.02 0.10 16 15 C -0.13 1.01 7.29 31.12 0.23 1.24 16 16 C -0.06 0.54 3.86 -11.02 -0.04 0.50 16 17 H 0.13 -1.73 8.09 -2.39 -0.02 -1.75 16 18 C -0.05 0.19 5.29 -19.87 -0.11 0.09 16 19 C -0.12 0.72 9.71 22.27 0.22 0.93 16 20 C -0.09 0.36 10.04 22.26 0.22 0.59 16 21 C -0.17 -0.05 10.03 22.31 0.22 0.17 16 22 C 0.07 0.25 7.30 22.37 0.16 0.42 16 23 F -0.16 -1.21 17.27 44.97 0.78 -0.44 16 24 C -0.16 -0.01 8.59 22.31 0.19 0.18 16 25 C -0.15 0.71 7.25 31.12 0.23 0.94 16 26 C -0.02 -0.02 9.21 22.52 0.21 0.19 16 27 H 0.38 -0.24 8.41 -74.06 -0.62 -0.87 16 28 H 0.13 -0.07 7.77 -2.39 -0.02 -0.09 16 29 H -0.25 -0.81 5.27 99.48 0.52 -0.29 16 30 H -0.31 -2.48 7.11 99.48 0.71 -1.77 16 31 H 0.17 -2.14 8.06 -2.91 -0.02 -2.16 16 32 H 0.18 -3.06 6.40 -2.91 -0.02 -3.08 16 33 H 0.42 -5.64 6.73 -92.71 -0.62 -6.27 16 34 H 0.10 -1.04 8.14 -2.38 -0.02 -1.06 16 35 H 0.09 -0.60 7.72 -2.39 -0.02 -0.62 16 36 H 0.16 -1.80 8.05 -2.91 -0.02 -1.83 16 37 H 0.16 -1.37 8.06 -2.91 -0.02 -1.39 16 38 H 0.14 -0.23 8.06 -2.91 -0.02 -0.25 16 39 H 0.14 -0.16 6.66 -2.91 -0.02 -0.18 16 40 H 0.09 -0.30 6.31 -2.39 -0.02 -0.31 16 41 H 0.07 -0.30 8.14 -2.39 -0.02 -0.32 16 42 H 0.14 0.38 7.58 -2.92 -0.02 0.36 16 Total: 0.00 -21.92 359.00 1.84 -20.08 By element: Atomic # 1 Polarization: -21.47 SS G_CDS: -0.30 Total: -21.77 kcal Atomic # 6 Polarization: 5.46 SS G_CDS: 2.98 Total: 8.44 kcal Atomic # 7 Polarization: 4.11 SS G_CDS: -2.31 Total: 1.80 kcal Atomic # 8 Polarization: -8.82 SS G_CDS: -1.98 Total: -10.80 kcal Atomic # 9 Polarization: -1.27 SS G_CDS: 1.34 Total: 0.07 kcal Atomic # 14 Polarization: 0.06 SS G_CDS: 2.11 Total: 2.18 kcal Total: -21.92 1.84 -20.08 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705262_12496548.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -39.545 kcal (2) G-P(sol) polarization free energy of solvation -21.918 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -61.463 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.840 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.078 kcal (6) G-S(sol) free energy of system = (1) + (5) -59.623 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds