Wall clock time and date at job start Tue Mar 9 2021 12:59:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46506 * 1 3 3 C 1.34650 * 124.85187 * 2 1 4 4 C 1.36773 * 108.39979 * 179.83152 * 3 2 1 5 5 C 1.47256 * 126.94673 * 180.16253 * 4 3 2 6 6 O 1.21632 * 120.00115 * 180.31237 * 5 4 3 7 7 N 1.34778 * 119.99856 * 0.30658 * 5 4 3 8 8 C 1.46500 * 119.99572 * 180.02562 * 7 5 4 9 9 H 1.08996 * 112.85123 * 336.19057 * 8 7 5 10 10 C 1.53783 * 113.61414 * 107.50570 * 8 7 5 11 11 C 1.53781 * 87.08185 * 89.11142 * 10 8 7 12 12 H 1.08991 * 113.69200 * 270.87020 * 11 10 8 13 13 C 1.50701 * 113.61158 * 139.97600 * 11 10 8 14 14 C 1.38186 * 119.98197 * 142.50003 * 13 11 10 15 15 C 1.38486 * 119.97146 * 179.97438 * 14 13 11 16 16 F 1.35101 * 120.02154 * 180.02562 * 15 14 13 17 17 C 1.38435 * 119.94774 * 0.02562 * 15 14 13 18 18 C 1.38213 * 119.97740 * 359.97438 * 17 15 14 19 19 C 1.38227 * 120.02813 * 359.75063 * 18 17 15 20 20 C 1.53783 * 87.08103 * 25.43354 * 11 10 8 21 21 C 1.46697 * 106.11011 * 0.42148 * 4 3 2 22 22 C 1.34487 * 106.33082 * 359.74034 * 21 4 3 23 23 C 1.50703 * 125.56958 * 179.97438 * 22 21 4 24 24 O 1.42901 * 109.47055 * 210.02547 * 23 22 21 25 25 Si 1.86300 * 109.46890 * 330.02279 * 23 22 21 26 26 H 1.09001 * 109.47060 * 269.69802 * 1 2 3 27 27 H 1.09004 * 109.47073 * 29.69290 * 1 2 3 28 28 H 1.09000 * 109.47212 * 149.69373 * 1 2 3 29 29 H 1.08009 * 125.80190 * 0.02562 * 3 2 1 30 30 H 0.96996 * 119.99869 * 359.97438 * 7 5 4 31 31 H 1.09007 * 113.60840 * 203.65987 * 10 8 7 32 32 H 1.08994 * 113.61365 * 334.55803 * 10 8 7 33 33 H 1.07994 * 120.01266 * 0.02562 * 14 13 11 34 34 H 1.07998 * 120.01165 * 180.02562 * 17 15 14 35 35 H 1.08007 * 119.99027 * 179.97438 * 18 17 15 36 36 H 1.07994 * 119.97860 * 180.25266 * 19 18 17 37 37 H 1.09002 * 113.61413 * 220.02027 * 20 11 10 38 38 H 1.09001 * 113.61867 * 89.11678 * 20 11 10 39 39 H 1.07997 * 126.82928 * 179.74369 * 21 4 3 40 40 H 1.08996 * 109.47058 * 90.02456 * 23 22 21 41 41 H 0.96702 * 113.99860 * 59.99336 * 24 23 22 42 42 H 1.48497 * 109.99871 * 180.02562 * 25 23 22 43 43 H 1.48501 * 110.00195 * 301.32183 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.2345 1.1050 0.0000 4 6 3.5463 0.7176 0.0038 5 6 4.7284 1.5956 0.0085 6 8 5.8447 1.1126 0.0059 7 7 4.5734 2.9344 0.0157 8 6 5.7496 3.8079 0.0198 9 1 6.6374 3.3204 0.4223 10 6 5.9909 4.5225 -1.3203 11 6 5.0864 5.6488 -0.7928 12 1 4.0298 5.5035 -1.0175 13 6 5.5750 7.0303 -1.1447 14 6 4.6687 8.0210 -1.4711 15 6 5.1180 9.2906 -1.7939 16 9 4.2328 10.2601 -2.1127 17 6 6.4748 9.5653 -1.7897 18 6 7.3794 8.5728 -1.4629 19 6 6.9296 7.3075 -1.1353 20 6 5.4829 5.1972 0.6228 21 6 3.5375 -0.7493 -0.0041 22 6 2.2447 -1.1198 -0.0061 23 6 1.7397 -2.5396 -0.0143 24 8 0.4809 -2.5936 -0.6886 25 14 2.9650 -3.6294 -0.8985 26 1 -0.3633 -0.0054 1.0277 27 1 -0.3633 0.8928 -0.5091 28 1 -0.3634 -0.8872 -0.5186 29 1 1.8767 2.1241 0.0004 30 1 3.6832 3.3196 0.0173 31 1 7.0261 4.8286 -1.4717 32 1 5.5749 3.9940 -2.1781 33 1 3.6105 7.8056 -1.4736 34 1 6.8263 10.5552 -2.0409 35 1 8.4381 8.7868 -1.4600 36 1 7.6369 6.5336 -0.8761 37 1 4.6568 5.2134 1.3337 38 1 6.3792 5.6877 1.0026 39 1 4.3981 -1.4018 -0.0076 40 1 1.6177 -2.8878 1.0114 41 1 0.5145 -2.2972 -1.6084 42 1 2.4783 -5.0323 -0.9140 43 1 3.1642 -3.1460 -2.2884 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705262_13287730.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:11 Heat of formation + Delta-G solvation = -3.910035 kcal Electronic energy + Delta-G solvation = -26999.556601 eV Core-core repulsion = 22927.636311 eV Total energy + Delta-G solvation = -4071.920290 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.137 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -49.80079 -42.52024 -41.46109 -39.91950 -38.52337 -38.00560 -34.47359 -33.79659 -32.23768 -31.51530 -31.00406 -27.82350 -26.79092 -26.68442 -25.97685 -23.99398 -23.68572 -22.60707 -21.05565 -20.75803 -20.20542 -19.11300 -18.38278 -17.52156 -17.36287 -17.10260 -17.00048 -16.88743 -16.72954 -16.51022 -15.96386 -15.85192 -15.50161 -15.45417 -15.25359 -14.90320 -14.67012 -14.39751 -14.14609 -14.12149 -13.84085 -13.63483 -13.52419 -13.35161 -13.20042 -12.92628 -12.85027 -12.76414 -12.33994 -11.95233 -11.85337 -11.74295 -11.30999 -10.98245 -10.78834 -10.01379 -9.93608 -9.62206 -9.57433 -9.24815 -4.94745 0.14708 0.20492 0.73323 1.01135 1.41969 1.63233 1.76968 2.01105 2.24119 2.53308 2.66008 3.00535 3.22288 3.37089 3.49717 3.59529 3.64991 3.72984 3.74583 3.79652 3.90300 4.02119 4.06209 4.12891 4.16656 4.18414 4.36581 4.37314 4.42731 4.52882 4.59357 4.65591 4.76729 4.82060 4.85038 4.91584 4.96204 4.96735 5.06545 5.10743 5.14945 5.32776 5.48098 5.60685 5.69123 5.89942 5.92210 6.10660 6.14742 6.63491 7.44905 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.050 3.950 2 N -0.425 5.425 3 C 0.050 3.950 4 C -0.227 4.227 5 C 0.594 3.406 6 O -0.538 6.538 7 N -0.716 5.716 8 C 0.123 3.877 9 H 0.108 0.892 10 C -0.144 4.144 11 C -0.076 4.076 12 H 0.098 0.902 13 C -0.042 4.042 14 C -0.152 4.152 15 C 0.100 3.900 16 F -0.140 7.140 17 C -0.159 4.159 18 C -0.086 4.086 19 C -0.128 4.128 20 C -0.135 4.135 21 C -0.129 4.129 22 C -0.022 4.022 23 C -0.049 4.049 24 O -0.533 6.533 25 Si 0.712 3.288 26 H 0.075 0.925 27 H 0.081 0.919 28 H 0.111 0.889 29 H 0.169 0.831 30 H 0.397 0.603 31 H 0.096 0.904 32 H 0.076 0.924 33 H 0.133 0.867 34 H 0.135 0.865 35 H 0.134 0.866 36 H 0.132 0.868 37 H 0.077 0.923 38 H 0.100 0.900 39 H 0.158 0.842 40 H 0.122 0.878 41 H 0.378 0.622 42 H -0.253 1.253 43 H -0.256 1.256 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.087 0.434 0.993 2.351 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.091 4.091 2 N -0.100 5.100 3 C -0.087 4.087 4 C -0.238 4.238 5 C 0.384 3.616 6 O -0.415 6.415 7 N -0.367 5.367 8 C 0.018 3.982 9 H 0.126 0.874 10 C -0.182 4.182 11 C -0.094 4.094 12 H 0.117 0.883 13 C -0.042 4.042 14 C -0.171 4.171 15 C 0.081 3.919 16 F -0.118 7.118 17 C -0.178 4.178 18 C -0.104 4.104 19 C -0.146 4.146 20 C -0.173 4.173 21 C -0.153 4.153 22 C -0.131 4.131 23 C -0.158 4.158 24 O -0.339 6.339 25 Si 0.611 3.389 26 H 0.094 0.906 27 H 0.100 0.900 28 H 0.129 0.871 29 H 0.187 0.813 30 H 0.231 0.769 31 H 0.115 0.885 32 H 0.095 0.905 33 H 0.151 0.849 34 H 0.153 0.847 35 H 0.152 0.848 36 H 0.149 0.851 37 H 0.096 0.904 38 H 0.118 0.882 39 H 0.176 0.824 40 H 0.140 0.860 41 H 0.226 0.774 42 H -0.178 1.178 43 H -0.180 1.180 Dipole moment (debyes) X Y Z Total from point charges -1.752 -0.694 0.887 2.082 hybrid contribution -1.685 1.318 -0.696 2.250 sum -3.437 0.624 0.190 3.498 Atomic orbital electron populations 1.22556 0.76369 1.05823 1.04379 1.43486 1.06996 1.04973 1.54538 1.21932 0.90170 0.91790 1.04761 1.20279 0.91390 0.93971 1.18123 1.17377 0.88103 0.81114 0.75053 1.90791 1.25770 1.75073 1.49886 1.45500 1.08922 1.05633 1.76610 1.21792 0.89969 0.89848 0.96630 0.87426 1.23585 1.00617 0.95797 0.98224 1.21640 1.00159 0.90445 0.97185 0.88340 1.19549 0.92979 0.94616 0.97038 1.21047 1.00907 0.91721 1.03424 1.17739 0.87146 0.86027 1.00963 1.91520 1.68093 1.61938 1.90300 1.21208 0.91435 1.01347 1.03793 1.21049 0.99868 0.92415 0.97091 1.21115 0.95199 0.97183 1.01096 1.23440 1.03100 0.95085 0.95694 1.21633 0.94822 0.93036 1.05797 1.20760 0.90708 0.89008 1.12641 1.24791 0.92673 0.94790 1.03595 1.86554 1.29812 1.88368 1.29198 0.94184 0.85178 0.77452 0.82082 0.90621 0.90016 0.87120 0.81344 0.76895 0.88517 0.90541 0.84882 0.84723 0.84802 0.85051 0.90399 0.88205 0.82422 0.85983 0.77402 1.17799 1.18048 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.16 10.71 59.85 0.64 0.48 16 2 N -0.43 0.37 3.09 -119.89 -0.37 0.00 16 3 C 0.05 -0.05 10.83 -16.85 -0.18 -0.23 16 4 C -0.23 -0.34 6.29 -103.35 -0.65 -0.99 16 5 C 0.59 1.63 7.81 -12.59 -0.10 1.53 16 6 O -0.54 -3.59 16.57 5.25 0.09 -3.50 16 7 N -0.72 0.46 5.25 -54.14 -0.28 0.18 16 8 C 0.12 -0.10 4.32 -67.12 -0.29 -0.39 16 9 H 0.11 0.10 7.46 -51.93 -0.39 -0.29 16 10 C -0.14 0.20 7.25 -25.92 -0.19 0.01 16 11 C -0.08 0.17 3.86 -90.96 -0.35 -0.18 16 12 H 0.10 -0.30 8.09 -51.93 -0.42 -0.72 16 13 C -0.04 0.03 5.29 -104.63 -0.55 -0.53 16 14 C -0.15 -0.06 9.69 -39.51 -0.38 -0.45 16 15 C 0.10 0.17 7.30 -39.42 -0.29 -0.11 16 16 F -0.14 -0.44 17.27 2.25 0.04 -0.40 16 17 C -0.16 -0.08 10.03 -39.52 -0.40 -0.48 16 18 C -0.09 0.06 10.04 -39.59 -0.40 -0.34 16 19 C -0.13 0.12 8.60 -39.58 -0.34 -0.22 16 20 C -0.14 0.33 7.29 -25.92 -0.19 0.14 16 21 C -0.13 -0.18 9.49 -37.49 -0.36 -0.53 16 22 C -0.02 0.00 6.14 -81.86 -0.50 -0.50 16 23 C -0.05 0.06 2.98 36.01 0.11 0.17 16 24 O -0.53 0.57 9.95 -35.23 -0.35 0.22 16 25 Si 0.71 -0.86 31.12 -169.99 -5.29 -6.15 16 26 H 0.08 -0.24 8.14 -51.93 -0.42 -0.67 16 27 H 0.08 -0.40 8.13 -51.93 -0.42 -0.82 16 28 H 0.11 -0.36 4.93 -51.93 -0.26 -0.61 16 29 H 0.17 -0.76 7.45 -52.48 -0.39 -1.15 16 30 H 0.40 -1.32 7.64 -40.82 -0.31 -1.63 16 31 H 0.10 -0.18 6.32 -51.93 -0.33 -0.51 16 32 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 33 H 0.13 -0.12 8.05 -52.49 -0.42 -0.54 16 34 H 0.13 -0.10 8.06 -52.49 -0.42 -0.52 16 35 H 0.13 -0.36 8.06 -52.48 -0.42 -0.79 16 36 H 0.13 -0.34 6.67 -52.49 -0.35 -0.69 16 37 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 38 H 0.10 -0.27 7.71 -51.93 -0.40 -0.67 16 39 H 0.16 0.06 6.89 -52.49 -0.36 -0.30 16 40 H 0.12 -0.22 7.96 -51.93 -0.41 -0.63 16 41 H 0.38 -1.32 8.38 45.56 0.38 -0.94 16 42 H -0.25 -0.39 7.11 56.52 0.40 0.01 16 43 H -0.26 -0.38 7.11 56.52 0.40 0.02 16 LS Contribution 361.63 15.07 5.45 5.45 Total: 0.00 -8.85 361.63 -10.53 -19.38 By element: Atomic # 1 Polarization: -7.16 SS G_CDS: -5.40 Total: -12.56 kcal Atomic # 6 Polarization: 1.79 SS G_CDS: -4.42 Total: -2.63 kcal Atomic # 7 Polarization: 0.84 SS G_CDS: -0.65 Total: 0.18 kcal Atomic # 8 Polarization: -3.01 SS G_CDS: -0.26 Total: -3.28 kcal Atomic # 9 Polarization: -0.44 SS G_CDS: 0.04 Total: -0.40 kcal Atomic # 14 Polarization: -0.86 SS G_CDS: -5.29 Total: -6.15 kcal Total LS contribution 5.45 Total: 5.45 kcal Total: -8.85 -10.53 -19.38 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705262_13287730.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 15.474 kcal (2) G-P(sol) polarization free energy of solvation -8.853 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 6.621 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.531 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.384 kcal (6) G-S(sol) free energy of system = (1) + (5) -3.910 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds