Wall clock time and date at job start Tue Mar 9 2021 12:59:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46506 * 1 3 3 C 1.34650 * 124.85187 * 2 1 4 4 C 1.36773 * 108.39979 * 179.83152 * 3 2 1 5 5 C 1.47256 * 126.94673 * 180.16253 * 4 3 2 6 6 O 1.21632 * 120.00115 * 180.31237 * 5 4 3 7 7 N 1.34778 * 119.99856 * 0.30658 * 5 4 3 8 8 C 1.46500 * 119.99572 * 180.02562 * 7 5 4 9 9 H 1.08996 * 112.85123 * 336.19057 * 8 7 5 10 10 C 1.53783 * 113.61414 * 107.50570 * 8 7 5 11 11 C 1.53781 * 87.08185 * 89.11142 * 10 8 7 12 12 H 1.08991 * 113.69200 * 270.87020 * 11 10 8 13 13 C 1.50701 * 113.61158 * 139.97600 * 11 10 8 14 14 C 1.38186 * 119.98197 * 142.50003 * 13 11 10 15 15 C 1.38486 * 119.97146 * 179.97438 * 14 13 11 16 16 F 1.35101 * 120.02154 * 180.02562 * 15 14 13 17 17 C 1.38435 * 119.94774 * 0.02562 * 15 14 13 18 18 C 1.38213 * 119.97740 * 359.97438 * 17 15 14 19 19 C 1.38227 * 120.02813 * 359.75063 * 18 17 15 20 20 C 1.53783 * 87.08103 * 25.43354 * 11 10 8 21 21 C 1.46697 * 106.11011 * 0.42148 * 4 3 2 22 22 C 1.34487 * 106.33082 * 359.74034 * 21 4 3 23 23 C 1.50703 * 125.56958 * 179.97438 * 22 21 4 24 24 O 1.42901 * 109.47055 * 210.02547 * 23 22 21 25 25 Si 1.86300 * 109.46890 * 330.02279 * 23 22 21 26 26 H 1.09001 * 109.47060 * 269.69802 * 1 2 3 27 27 H 1.09004 * 109.47073 * 29.69290 * 1 2 3 28 28 H 1.09000 * 109.47212 * 149.69373 * 1 2 3 29 29 H 1.08009 * 125.80190 * 0.02562 * 3 2 1 30 30 H 0.96996 * 119.99869 * 359.97438 * 7 5 4 31 31 H 1.09007 * 113.60840 * 203.65987 * 10 8 7 32 32 H 1.08994 * 113.61365 * 334.55803 * 10 8 7 33 33 H 1.07994 * 120.01266 * 0.02562 * 14 13 11 34 34 H 1.07998 * 120.01165 * 180.02562 * 17 15 14 35 35 H 1.08007 * 119.99027 * 179.97438 * 18 17 15 36 36 H 1.07994 * 119.97860 * 180.25266 * 19 18 17 37 37 H 1.09002 * 113.61413 * 220.02027 * 20 11 10 38 38 H 1.09001 * 113.61867 * 89.11678 * 20 11 10 39 39 H 1.07997 * 126.82928 * 179.74369 * 21 4 3 40 40 H 1.08996 * 109.47058 * 90.02456 * 23 22 21 41 41 H 0.96702 * 113.99860 * 59.99336 * 24 23 22 42 42 H 1.48497 * 109.99871 * 180.02562 * 25 23 22 43 43 H 1.48501 * 110.00195 * 301.32183 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.2345 1.1050 0.0000 4 6 3.5463 0.7176 0.0038 5 6 4.7284 1.5956 0.0085 6 8 5.8447 1.1126 0.0059 7 7 4.5734 2.9344 0.0157 8 6 5.7496 3.8079 0.0198 9 1 6.6374 3.3204 0.4223 10 6 5.9909 4.5225 -1.3203 11 6 5.0864 5.6488 -0.7928 12 1 4.0298 5.5035 -1.0175 13 6 5.5750 7.0303 -1.1447 14 6 4.6687 8.0210 -1.4711 15 6 5.1180 9.2906 -1.7939 16 9 4.2328 10.2601 -2.1127 17 6 6.4748 9.5653 -1.7897 18 6 7.3794 8.5728 -1.4629 19 6 6.9296 7.3075 -1.1353 20 6 5.4829 5.1972 0.6228 21 6 3.5375 -0.7493 -0.0041 22 6 2.2447 -1.1198 -0.0061 23 6 1.7397 -2.5396 -0.0143 24 8 0.4809 -2.5936 -0.6886 25 14 2.9650 -3.6294 -0.8985 26 1 -0.3633 -0.0054 1.0277 27 1 -0.3633 0.8928 -0.5091 28 1 -0.3634 -0.8872 -0.5186 29 1 1.8767 2.1241 0.0004 30 1 3.6832 3.3196 0.0173 31 1 7.0261 4.8286 -1.4717 32 1 5.5749 3.9940 -2.1781 33 1 3.6105 7.8056 -1.4736 34 1 6.8263 10.5552 -2.0409 35 1 8.4381 8.7868 -1.4600 36 1 7.6369 6.5336 -0.8761 37 1 4.6568 5.2134 1.3337 38 1 6.3792 5.6877 1.0026 39 1 4.3981 -1.4018 -0.0076 40 1 1.6177 -2.8878 1.0114 41 1 0.5145 -2.2972 -1.6084 42 1 2.4783 -5.0323 -0.9140 43 1 3.1642 -3.1460 -2.2884 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705262_13287730.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:10 Heat of formation + Delta-G solvation = -0.693234 kcal Electronic energy + Delta-G solvation = -26999.417110 eV Core-core repulsion = 22927.636311 eV Total energy + Delta-G solvation = -4071.780800 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.137 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -49.92197 -42.46356 -41.39968 -39.97683 -38.52951 -37.93431 -34.54913 -33.68533 -32.19156 -31.47073 -30.95440 -27.68274 -26.65393 -26.61074 -25.89536 -23.96675 -23.64809 -22.58318 -21.06417 -20.69006 -20.16792 -19.04122 -18.36202 -17.43314 -17.36107 -17.07604 -17.03739 -16.80695 -16.64597 -16.62570 -15.96166 -15.76551 -15.46604 -15.40652 -15.25844 -14.82692 -14.59356 -14.43733 -14.12246 -14.10544 -13.81977 -13.50611 -13.40565 -13.22066 -13.07968 -12.89874 -12.77401 -12.68737 -12.35207 -11.97227 -11.75699 -11.65422 -11.22403 -10.99703 -10.89474 -10.07084 -9.89235 -9.60539 -9.53830 -9.20045 -4.88983 0.16770 0.24952 0.75028 1.03768 1.45729 1.63659 1.81461 2.06294 2.27796 2.55685 2.59383 3.16150 3.23949 3.48679 3.57015 3.68354 3.75518 3.88586 3.90098 3.96471 4.01314 4.12382 4.17036 4.27409 4.31414 4.43745 4.44203 4.46249 4.52111 4.69703 4.79479 4.81534 4.88870 4.93085 4.94655 4.97983 5.01609 5.06059 5.12691 5.17935 5.22626 5.39424 5.53687 5.65219 5.72187 5.94588 5.97573 6.23721 6.32306 6.66713 7.37321 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.046 3.954 2 N -0.427 5.427 3 C 0.070 3.930 4 C -0.260 4.260 5 C 0.591 3.409 6 O -0.590 6.590 7 N -0.700 5.700 8 C 0.116 3.884 9 H 0.086 0.914 10 C -0.142 4.142 11 C -0.067 4.067 12 H 0.112 0.888 13 C -0.044 4.044 14 C -0.158 4.158 15 C 0.072 3.928 16 F -0.155 7.155 17 C -0.170 4.170 18 C -0.090 4.090 19 C -0.129 4.129 20 C -0.123 4.123 21 C -0.155 4.155 22 C -0.024 4.024 23 C -0.044 4.044 24 O -0.539 6.539 25 Si 0.774 3.226 26 H 0.079 0.921 27 H 0.104 0.896 28 H 0.110 0.890 29 H 0.206 0.794 30 H 0.412 0.588 31 H 0.101 0.899 32 H 0.066 0.934 33 H 0.143 0.857 34 H 0.141 0.859 35 H 0.154 0.846 36 H 0.148 0.852 37 H 0.088 0.912 38 H 0.104 0.896 39 H 0.155 0.845 40 H 0.132 0.868 41 H 0.388 0.612 42 H -0.289 1.289 43 H -0.294 1.294 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.252 1.165 1.525 3.776 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.094 4.094 2 N -0.101 5.101 3 C -0.068 4.068 4 C -0.271 4.271 5 C 0.381 3.619 6 O -0.472 6.472 7 N -0.351 5.351 8 C 0.011 3.989 9 H 0.104 0.896 10 C -0.180 4.180 11 C -0.085 4.085 12 H 0.130 0.870 13 C -0.044 4.044 14 C -0.177 4.177 15 C 0.053 3.947 16 F -0.134 7.134 17 C -0.188 4.188 18 C -0.107 4.107 19 C -0.147 4.147 20 C -0.161 4.161 21 C -0.179 4.179 22 C -0.134 4.134 23 C -0.153 4.153 24 O -0.347 6.347 25 Si 0.678 3.322 26 H 0.097 0.903 27 H 0.123 0.877 28 H 0.128 0.872 29 H 0.223 0.777 30 H 0.249 0.751 31 H 0.119 0.881 32 H 0.085 0.915 33 H 0.161 0.839 34 H 0.159 0.841 35 H 0.172 0.828 36 H 0.166 0.834 37 H 0.107 0.893 38 H 0.122 0.878 39 H 0.173 0.827 40 H 0.150 0.850 41 H 0.238 0.762 42 H -0.216 1.216 43 H -0.221 1.221 Dipole moment (debyes) X Y Z Total from point charges -2.954 0.074 1.426 3.281 hybrid contribution -1.330 1.071 -0.909 1.934 sum -4.284 1.145 0.518 4.464 Atomic orbital electron populations 1.22732 0.74720 1.06992 1.04937 1.43724 1.07998 1.04662 1.53671 1.22414 0.89135 0.93188 1.02040 1.20317 0.92146 0.93961 1.20634 1.17653 0.87786 0.82089 0.74354 1.90754 1.27638 1.76095 1.52696 1.45353 1.09864 1.04661 1.75216 1.21820 0.89349 0.90316 0.97449 0.89558 1.23573 1.01136 0.95906 0.97401 1.21625 1.00642 0.89151 0.97063 0.86998 1.19715 0.93050 0.94953 0.96695 1.21225 1.01755 0.91447 1.03283 1.18063 0.87556 0.86446 1.02620 1.91474 1.68615 1.62590 1.90685 1.21410 0.91300 1.02158 1.03956 1.21332 1.00744 0.92214 0.96460 1.21405 0.95534 0.97530 1.00236 1.23385 1.03690 0.93298 0.95701 1.21826 0.95559 0.93589 1.06877 1.20807 0.90480 0.89774 1.12301 1.24738 0.92428 0.94103 1.04063 1.86538 1.29646 1.88429 1.30103 0.93308 0.84494 0.74570 0.79835 0.90281 0.87747 0.87172 0.77707 0.75086 0.88082 0.91532 0.83893 0.84122 0.82821 0.83393 0.89347 0.87751 0.82737 0.85016 0.76235 1.21593 1.22075 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.39 10.71 127.77 1.37 0.98 16 2 N -0.43 1.31 3.09 -533.21 -1.65 -0.33 16 3 C 0.07 -0.25 10.83 83.92 0.91 0.66 16 4 C -0.26 -0.86 6.29 -19.04 -0.12 -0.98 16 5 C 0.59 3.81 7.81 86.61 0.68 4.49 16 6 O -0.59 -9.25 16.57 -4.13 -0.07 -9.32 16 7 N -0.70 1.08 5.25 -443.45 -2.33 -1.25 16 8 C 0.12 -0.19 4.32 45.52 0.20 0.00 16 9 H 0.09 0.27 7.46 -2.39 -0.02 0.26 16 10 C -0.14 0.44 7.25 31.12 0.23 0.67 16 11 C -0.07 0.38 3.86 -11.01 -0.04 0.33 16 12 H 0.11 -0.91 8.09 -2.39 -0.02 -0.93 16 13 C -0.04 0.10 5.29 -19.87 -0.11 -0.01 16 14 C -0.16 -0.09 9.69 22.32 0.22 0.13 16 15 C 0.07 0.29 7.30 22.38 0.16 0.45 16 16 F -0.15 -1.15 17.27 44.97 0.78 -0.37 16 17 C -0.17 -0.21 10.03 22.31 0.22 0.01 16 18 C -0.09 0.19 10.04 22.26 0.22 0.41 16 19 C -0.13 0.37 8.60 22.27 0.19 0.57 16 20 C -0.12 0.76 7.29 31.12 0.23 0.98 16 21 C -0.15 -0.58 9.49 23.62 0.22 -0.35 16 22 C -0.02 0.00 6.14 40.98 0.25 0.25 16 23 C -0.04 0.11 2.98 71.24 0.21 0.32 16 24 O -0.54 1.48 9.95 -148.98 -1.48 -0.01 16 25 Si 0.77 -0.94 31.12 68.60 2.13 1.20 16 26 H 0.08 -0.67 8.14 -2.39 -0.02 -0.69 16 27 H 0.10 -1.33 8.13 -2.38 -0.02 -1.35 16 28 H 0.11 -0.89 4.93 -2.39 -0.01 -0.90 16 29 H 0.21 -2.50 7.45 -2.91 -0.02 -2.52 16 30 H 0.41 -3.39 7.64 -92.71 -0.71 -4.10 16 31 H 0.10 -0.41 6.32 -2.38 -0.02 -0.43 16 32 H 0.07 -0.05 8.14 -2.39 -0.02 -0.07 16 33 H 0.14 -0.34 8.05 -2.91 -0.02 -0.37 16 34 H 0.14 -0.14 8.06 -2.91 -0.02 -0.17 16 35 H 0.15 -1.02 8.06 -2.91 -0.02 -1.05 16 36 H 0.15 -0.98 6.67 -2.91 -0.02 -1.00 16 37 H 0.09 -0.68 8.14 -2.39 -0.02 -0.70 16 38 H 0.10 -0.69 7.71 -2.39 -0.02 -0.71 16 39 H 0.16 0.45 6.89 -2.91 -0.02 0.43 16 40 H 0.13 -0.55 7.96 -2.39 -0.02 -0.57 16 41 H 0.39 -2.89 8.38 -74.06 -0.62 -3.51 16 42 H -0.29 -1.35 7.11 99.48 0.71 -0.65 16 43 H -0.29 -1.47 7.11 99.48 0.71 -0.77 16 Total: 0.00 -23.15 361.63 2.20 -20.95 By element: Atomic # 1 Polarization: -19.57 SS G_CDS: -0.23 Total: -19.80 kcal Atomic # 6 Polarization: 3.88 SS G_CDS: 5.04 Total: 8.92 kcal Atomic # 7 Polarization: 2.40 SS G_CDS: -3.97 Total: -1.58 kcal Atomic # 8 Polarization: -7.77 SS G_CDS: -1.55 Total: -9.33 kcal Atomic # 9 Polarization: -1.15 SS G_CDS: 0.78 Total: -0.37 kcal Atomic # 14 Polarization: -0.94 SS G_CDS: 2.13 Total: 1.20 kcal Total: -23.15 2.20 -20.95 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705262_13287730.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 20.259 kcal (2) G-P(sol) polarization free energy of solvation -23.154 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -2.895 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.202 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.952 kcal (6) G-S(sol) free energy of system = (1) + (5) -0.693 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds