Wall clock time and date at job start Tue Mar 9 2021 12:59:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.38974 * 119.95353 * 2 1 4 4 O 1.35710 * 119.91559 * 359.97438 * 3 2 1 5 5 C 1.39028 * 120.17121 * 179.76739 * 3 2 1 6 6 C 1.50695 * 119.95160 * 180.23172 * 5 3 2 7 7 O 1.42899 * 109.47515 * 285.27302 * 6 5 3 8 8 Si 1.86303 * 109.46906 * 165.27588 * 6 5 3 9 9 C 1.37674 * 120.08728 * 0.51049 * 5 3 2 10 10 C 1.39750 * 119.91560 * 359.74616 * 9 5 3 11 11 C 1.47609 * 120.09182 * 179.97438 * 10 9 5 12 12 O 1.21584 * 119.99654 * 0.02562 * 11 10 9 13 13 N 1.34770 * 120.00032 * 180.02562 * 11 10 9 14 14 C 1.46498 * 119.99769 * 179.97438 * 13 11 10 15 15 H 1.08994 * 112.85285 * 336.19840 * 14 13 11 16 16 C 1.53784 * 113.61228 * 107.50379 * 14 13 11 17 17 C 1.53784 * 87.08514 * 89.11660 * 16 14 13 18 18 H 1.08999 * 113.61319 * 270.88869 * 17 16 14 19 19 C 1.50689 * 113.61851 * 139.97863 * 17 16 14 20 20 C 1.38178 * 119.99076 * 142.50581 * 19 17 16 21 21 C 1.38481 * 119.97801 * 180.02562 * 20 19 17 22 22 F 1.35101 * 120.02387 * 179.97438 * 21 20 19 23 23 C 1.38437 * 119.95001 * 359.97438 * 21 20 19 24 24 C 1.38221 * 119.97340 * 0.02562 * 23 21 20 25 25 C 1.38234 * 120.02273 * 359.72695 * 24 23 21 26 26 C 1.53782 * 87.07841 * 25.43276 * 17 16 14 27 27 C 1.37727 * 119.95432 * 180.27928 * 2 1 3 28 28 H 1.09002 * 109.47152 * 269.72335 * 1 2 3 29 29 H 1.09001 * 109.46980 * 149.72436 * 1 2 3 30 30 H 1.09004 * 109.47113 * 29.72417 * 1 2 3 31 31 H 0.96699 * 113.99502 * 90.00322 * 4 3 2 32 32 H 1.08997 * 109.47325 * 45.27961 * 6 5 3 33 33 H 0.96698 * 114.00403 * 300.00435 * 7 6 5 34 34 H 1.48500 * 109.99997 * 58.67965 * 8 6 5 35 35 H 1.48504 * 110.00090 * 180.02562 * 8 6 5 36 36 H 1.08012 * 120.04233 * 179.76737 * 9 5 3 37 37 H 0.97001 * 119.99930 * 359.97438 * 13 11 10 38 38 H 1.09002 * 113.61450 * 203.66246 * 16 14 13 39 39 H 1.09000 * 113.61639 * 334.56837 * 16 14 13 40 40 H 1.08005 * 120.00823 * 359.97438 * 20 19 17 41 41 H 1.07993 * 120.01675 * 179.97438 * 23 21 20 42 42 H 1.07999 * 119.99059 * 180.02562 * 24 23 21 43 43 H 1.08004 * 119.97389 * 180.29830 * 25 24 23 44 44 H 1.09011 * 113.61525 * 220.02331 * 26 17 16 45 45 H 1.08997 * 113.69342 * 89.12678 * 26 17 16 46 46 H 1.08000 * 120.04574 * 359.97438 * 27 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2009 1.2041 0.0000 4 8 1.5197 2.3778 -0.0005 5 6 3.5912 1.2094 0.0049 6 6 4.3386 2.5179 0.0101 7 8 4.2712 3.1103 -1.2886 8 14 6.1201 2.2137 0.4622 9 6 4.2859 0.0208 -0.0009 10 6 3.5919 -1.1921 -0.0063 11 6 4.3328 -2.4688 -0.0130 12 8 5.5486 -2.4659 -0.0134 13 7 3.6616 -3.6374 -0.0188 14 6 4.3970 -4.9044 -0.0260 15 1 5.4040 -4.8070 -0.4316 16 6 4.3407 -5.6570 1.3139 17 6 3.0632 -6.3342 0.7900 18 1 2.1514 -5.7824 1.0184 19 6 2.9675 -7.7965 1.1414 20 6 1.7447 -8.3490 1.4712 21 6 1.6572 -9.6926 1.7946 22 9 0.4621 -10.2337 2.1177 23 6 2.7951 -10.4810 1.7864 24 6 4.0172 -9.9263 1.4562 25 6 4.1025 -8.5860 1.1286 26 6 3.6014 -6.0752 -0.6271 27 6 2.1947 -1.1933 -0.0058 28 1 -0.3633 -0.0050 1.0277 29 1 -0.3633 -0.8875 -0.5181 30 1 -0.3633 0.8925 -0.5096 31 1 1.3220 2.7182 0.8827 32 1 3.8883 3.1906 0.7401 33 1 4.6545 2.5656 -1.9897 34 1 6.7366 1.2728 -0.5073 35 1 6.8680 3.4966 0.4715 36 1 5.3660 0.0258 -0.0009 37 1 2.6916 -3.6396 -0.0181 38 1 5.1713 -6.3472 1.4623 39 1 4.1700 -5.0077 2.1726 40 1 0.8577 -7.7328 1.4776 41 1 2.7281 -11.5289 2.0388 42 1 4.9050 -10.5412 1.4494 43 1 5.0571 -8.1544 0.8660 44 1 2.8337 -5.7633 -1.3355 45 1 4.2299 -6.8789 -1.0106 46 1 1.6547 -2.1286 -0.0100 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705262_13287732.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:13 Heat of formation + Delta-G solvation = -72.933995 kcal Electronic energy + Delta-G solvation = -30690.086814 eV Core-core repulsion = 26233.690998 eV Total energy + Delta-G solvation = -4456.395816 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.141 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -49.91602 -41.90316 -41.20883 -40.15730 -38.69123 -37.97942 -37.47501 -34.77676 -33.97048 -32.34126 -31.64213 -31.01845 -27.98659 -27.03453 -26.68162 -26.40979 -24.77235 -23.73302 -22.74058 -22.05965 -21.62303 -20.28661 -19.58141 -18.91263 -18.37029 -18.07823 -17.35301 -17.27085 -17.04466 -16.82876 -16.62184 -16.53013 -16.17038 -16.06080 -15.85349 -15.58862 -15.45185 -14.96833 -14.72903 -14.52507 -14.41150 -14.14645 -14.06455 -13.88752 -13.81109 -13.48216 -13.27741 -13.02294 -12.90680 -12.80282 -12.75708 -12.70142 -12.46155 -11.92550 -11.77024 -11.68834 -11.63334 -11.25572 -11.12613 -10.62383 -10.20749 -9.97435 -9.89130 -9.64921 -9.58907 -5.01601 -0.39091 0.07419 0.16828 0.25156 1.20534 1.52567 1.60429 1.85976 1.98942 2.55621 2.58658 3.12795 3.24158 3.30865 3.44733 3.52130 3.55674 3.66943 3.70591 3.74101 3.88499 3.98484 4.02394 4.10983 4.16349 4.17892 4.26997 4.36931 4.43655 4.47288 4.62328 4.66978 4.73318 4.79729 4.83058 4.85210 4.90256 4.94327 5.04360 5.05183 5.08538 5.12141 5.15483 5.19670 5.21960 5.33576 5.39040 5.47952 5.60749 5.65067 5.94705 6.39866 6.42829 6.77117 7.10592 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.112 4.112 2 C -0.120 4.120 3 C 0.159 3.841 4 O -0.496 6.496 5 C -0.153 4.153 6 C -0.062 4.062 7 O -0.541 6.541 8 Si 0.750 3.250 9 C -0.065 4.065 10 C -0.150 4.150 11 C 0.562 3.438 12 O -0.576 6.576 13 N -0.694 5.694 14 C 0.113 3.887 15 H 0.089 0.911 16 C -0.140 4.140 17 C -0.068 4.068 18 H 0.114 0.886 19 C -0.044 4.044 20 C -0.158 4.158 21 C 0.072 3.928 22 F -0.155 7.155 23 C -0.170 4.170 24 C -0.090 4.090 25 C -0.129 4.129 26 C -0.125 4.125 27 C -0.053 4.053 28 H 0.088 0.912 29 H 0.083 0.917 30 H 0.068 0.932 31 H 0.413 0.587 32 H 0.133 0.867 33 H 0.383 0.617 34 H -0.294 1.294 35 H -0.293 1.293 36 H 0.132 0.868 37 H 0.415 0.585 38 H 0.102 0.898 39 H 0.071 0.929 40 H 0.144 0.856 41 H 0.140 0.860 42 H 0.153 0.847 43 H 0.149 0.851 44 H 0.088 0.912 45 H 0.105 0.895 46 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.553 -2.034 2.676 4.890 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.169 4.169 2 C -0.121 4.121 3 C 0.113 3.887 4 O -0.310 6.310 5 C -0.154 4.154 6 C -0.172 4.172 7 O -0.348 6.348 8 Si 0.657 3.343 9 C -0.084 4.084 10 C -0.154 4.154 11 C 0.351 3.649 12 O -0.457 6.457 13 N -0.345 5.345 14 C 0.008 3.992 15 H 0.107 0.893 16 C -0.178 4.178 17 C -0.086 4.086 18 H 0.132 0.868 19 C -0.044 4.044 20 C -0.176 4.176 21 C 0.053 3.947 22 F -0.134 7.134 23 C -0.189 4.189 24 C -0.108 4.108 25 C -0.147 4.147 26 C -0.162 4.162 27 C -0.072 4.072 28 H 0.106 0.894 29 H 0.102 0.898 30 H 0.087 0.913 31 H 0.274 0.726 32 H 0.150 0.850 33 H 0.231 0.769 34 H -0.222 1.222 35 H -0.220 1.220 36 H 0.149 0.851 37 H 0.254 0.746 38 H 0.121 0.879 39 H 0.090 0.910 40 H 0.162 0.838 41 H 0.158 0.842 42 H 0.171 0.829 43 H 0.166 0.834 44 H 0.107 0.893 45 H 0.123 0.877 46 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges -2.196 -1.581 2.181 3.475 hybrid contribution -0.696 -0.182 -0.631 0.957 sum -2.892 -1.763 1.550 3.725 Atomic orbital electron populations 1.20771 0.88300 1.04013 1.03793 1.20449 0.98294 0.91753 1.01612 1.18448 0.88639 0.85912 0.95667 1.84738 1.75436 1.35627 1.35226 1.20511 0.94173 0.95395 1.05341 1.24902 1.10007 0.93928 0.88328 1.86614 1.82931 1.48143 1.17123 0.94184 0.73181 0.77223 0.89753 1.21115 1.00411 0.91020 0.95844 1.19776 0.94330 0.92531 1.08725 1.18355 0.86759 0.84488 0.75309 1.90794 1.15252 1.88062 1.51558 1.45455 1.10791 1.04248 1.74040 1.21904 0.96904 0.82499 0.97927 0.89259 1.23571 0.97998 0.99012 0.97240 1.21647 0.99530 0.90503 0.96913 0.86793 1.19694 0.91932 0.96030 0.96740 1.21233 0.99997 0.93234 1.03178 1.18068 0.80912 0.93146 1.02560 1.91476 1.44743 1.86576 1.90578 1.21413 0.92227 1.01268 1.03948 1.21330 0.97290 0.95683 0.96503 1.21403 0.99356 0.93690 1.00241 1.23402 1.00013 0.96975 0.95855 1.21364 0.91610 0.99051 0.95162 0.89382 0.89780 0.91349 0.72632 0.84972 0.76869 1.22181 1.22046 0.85075 0.74648 0.87940 0.91016 0.83808 0.84199 0.82899 0.83363 0.89329 0.87676 0.81976 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.82 9.79 71.24 0.70 1.52 16 2 C -0.12 0.43 5.89 -19.81 -0.12 0.32 16 3 C 0.16 -0.11 6.66 22.64 0.15 0.04 16 4 O -0.50 0.83 11.85 -90.31 -1.07 -0.24 16 5 C -0.15 -0.12 5.27 -19.81 -0.10 -0.22 16 6 C -0.06 -0.04 2.37 71.23 0.17 0.13 16 7 O -0.54 -2.66 12.88 -148.98 -1.92 -4.58 16 8 Si 0.75 1.13 30.24 68.60 2.07 3.21 16 9 C -0.07 -0.18 8.20 22.50 0.18 0.01 16 10 C -0.15 -0.10 5.88 -20.08 -0.12 -0.22 16 11 C 0.56 1.84 7.76 86.72 0.67 2.51 16 12 O -0.58 -6.92 15.94 -3.98 -0.06 -6.98 16 13 N -0.69 2.79 5.21 -443.13 -2.31 0.48 16 14 C 0.11 -0.45 4.32 45.52 0.20 -0.25 16 15 H 0.09 0.05 7.46 -2.39 -0.02 0.04 16 16 C -0.14 0.77 7.25 31.12 0.23 0.99 16 17 C -0.07 0.50 3.86 -11.02 -0.04 0.46 16 18 H 0.11 -1.14 8.10 -2.39 -0.02 -1.16 16 19 C -0.04 0.16 5.29 -19.88 -0.11 0.05 16 20 C -0.16 0.09 9.69 22.31 0.22 0.30 16 21 C 0.07 0.23 7.30 22.38 0.16 0.39 16 22 F -0.15 -1.04 17.27 44.97 0.78 -0.27 16 23 C -0.17 -0.09 10.03 22.31 0.22 0.14 16 24 C -0.09 0.26 10.04 22.26 0.22 0.49 16 25 C -0.13 0.53 8.60 22.28 0.19 0.72 16 26 C -0.12 0.97 7.29 31.12 0.23 1.20 16 27 C -0.05 0.26 9.18 22.51 0.21 0.47 16 28 H 0.09 -0.87 8.14 -2.39 -0.02 -0.88 16 29 H 0.08 -0.81 8.08 -2.39 -0.02 -0.83 16 30 H 0.07 -0.32 7.51 -2.38 -0.02 -0.34 16 31 H 0.41 -4.51 9.06 -74.06 -0.67 -5.18 16 32 H 0.13 -0.37 7.83 -2.39 -0.02 -0.38 16 33 H 0.38 0.13 8.70 -74.06 -0.64 -0.52 16 34 H -0.29 -2.30 6.68 99.48 0.66 -1.64 16 35 H -0.29 -2.32 7.11 99.48 0.71 -1.61 16 36 H 0.13 0.67 4.43 -2.90 -0.01 0.66 16 37 H 0.41 -4.28 6.72 -92.71 -0.62 -4.90 16 38 H 0.10 -0.64 6.32 -2.39 -0.02 -0.66 16 39 H 0.07 -0.27 8.14 -2.39 -0.02 -0.29 16 40 H 0.14 -0.51 8.06 -2.91 -0.02 -0.53 16 41 H 0.14 -0.22 8.06 -2.91 -0.02 -0.24 16 42 H 0.15 -1.13 8.06 -2.91 -0.02 -1.15 16 43 H 0.15 -1.18 6.67 -2.91 -0.02 -1.20 16 44 H 0.09 -0.81 8.14 -2.38 -0.02 -0.83 16 45 H 0.10 -0.85 7.72 -2.39 -0.02 -0.87 16 46 H 0.16 -1.94 6.39 -2.91 -0.02 -1.96 16 Total: 0.00 -23.72 385.44 -0.12 -23.84 By element: Atomic # 1 Polarization: -23.62 SS G_CDS: -0.87 Total: -24.49 kcal Atomic # 6 Polarization: 5.77 SS G_CDS: 3.26 Total: 9.03 kcal Atomic # 7 Polarization: 2.79 SS G_CDS: -2.31 Total: 0.48 kcal Atomic # 8 Polarization: -8.75 SS G_CDS: -3.05 Total: -11.80 kcal Atomic # 9 Polarization: -1.04 SS G_CDS: 0.78 Total: -0.27 kcal Atomic # 14 Polarization: 1.13 SS G_CDS: 2.07 Total: 3.21 kcal Total: -23.72 -0.12 -23.84 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705262_13287732.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -49.089 kcal (2) G-P(sol) polarization free energy of solvation -23.724 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -72.814 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.120 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.845 kcal (6) G-S(sol) free energy of system = (1) + (5) -72.934 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds