Wall clock time and date at job start Tue Mar 9 2021 12:59:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86310 * 109.47134 * 2 1 4 4 C 1.50694 * 109.47460 * 120.00276 * 2 1 3 5 5 C 1.38352 * 120.35134 * 65.02143 * 4 2 1 6 6 C 1.40019 * 118.29215 * 179.97438 * 5 4 2 7 7 C 1.47848 * 120.56013 * 180.29603 * 6 5 4 8 8 O 1.21553 * 119.99800 * 359.72243 * 7 6 5 9 9 N 1.34778 * 119.99828 * 179.71808 * 7 6 5 10 10 C 1.46500 * 119.99844 * 180.02562 * 9 7 6 11 11 H 1.09002 * 112.84891 * 23.80294 * 10 9 7 12 12 C 1.53774 * 113.61528 * 154.99977 * 10 9 7 13 13 C 1.53786 * 87.08170 * 89.11871 * 12 10 9 14 14 H 1.09006 * 113.61268 * 270.80358 * 13 12 10 15 15 C 1.50701 * 113.61947 * 139.98074 * 13 12 10 16 16 C 1.38218 * 119.98606 * 119.99914 * 15 13 12 17 17 C 1.38272 * 120.04798 * 179.97438 * 16 15 13 18 18 C 1.38169 * 120.02616 * 359.97438 * 17 16 15 19 19 C 1.38480 * 119.97782 * 0.02737 * 18 17 16 20 20 F 1.35102 * 120.02874 * 179.97438 * 19 18 17 21 21 C 1.38218 * 119.98306 * 299.72843 * 15 13 12 22 22 C 1.53781 * 113.61412 * 252.50279 * 10 9 7 23 23 C 1.39525 * 118.88195 * 0.02562 * 6 5 4 24 24 N 1.31689 * 120.56677 * 359.97438 * 23 6 5 25 25 C 1.31926 * 121.87966 * 0.02562 * 24 23 6 26 26 H 0.96696 * 114.00206 * 59.99480 * 1 2 3 27 27 H 1.09004 * 109.47241 * 240.00786 * 2 1 3 28 28 H 1.48503 * 109.99534 * 60.00501 * 3 2 1 29 29 H 1.48492 * 109.99914 * 181.32072 * 3 2 1 30 30 H 1.08005 * 120.85575 * 0.02562 * 5 4 2 31 31 H 0.97002 * 120.00200 * 0.02562 * 9 7 6 32 32 H 1.09004 * 113.61529 * 203.65942 * 12 10 9 33 33 H 1.08997 * 113.61880 * 334.57004 * 12 10 9 34 34 H 1.08001 * 119.97811 * 0.02562 * 16 15 13 35 35 H 1.07994 * 119.98486 * 180.02562 * 17 16 15 36 36 H 1.08003 * 120.01565 * 180.02562 * 18 17 16 37 37 H 1.08003 * 120.01883 * 359.97438 * 21 15 13 38 38 H 1.09000 * 113.61924 * 25.42686 * 22 10 9 39 39 H 1.09006 * 113.61312 * 156.33623 * 22 10 9 40 40 H 1.07998 * 119.71326 * 179.97438 * 23 6 5 41 41 H 1.08004 * 119.46224 * 180.02562 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.6891 -2.0613 1.4055 6 6 2.1761 -2.6780 2.5644 7 6 1.9517 -4.1204 2.7994 8 8 1.3356 -4.7800 1.9853 9 7 2.4304 -4.7037 3.9161 10 6 2.2086 -6.1330 4.1486 11 1 2.0334 -6.6894 3.2279 12 6 3.2592 -6.7779 5.0678 13 6 2.3509 -6.3908 6.2468 14 1 2.5558 -5.3983 6.6483 15 6 2.2661 -7.4488 7.3165 16 6 2.6675 -7.1599 8.6072 17 6 2.5898 -8.1295 9.5899 18 6 2.1103 -9.3884 9.2826 19 6 1.7080 -9.6791 7.9898 20 9 1.2395 -10.9098 7.6881 21 6 1.7819 -8.7060 7.0078 22 6 1.1783 -6.4248 5.2523 23 6 2.8817 -1.9097 3.4910 24 7 3.0867 -0.6263 3.2791 25 6 2.6398 -0.0187 2.1968 26 1 -0.3933 0.4417 -0.7650 27 1 1.7923 -0.5137 -0.8901 28 1 1.5615 2.4679 1.2086 29 1 3.5345 1.7703 -0.0322 30 1 1.1392 -2.6258 0.6670 31 1 2.9219 -4.1771 4.5658 32 1 3.3590 -7.8544 4.9288 33 1 4.2178 -6.2592 5.0665 34 1 3.0412 -6.1758 8.8486 35 1 2.9032 -7.9025 10.5981 36 1 2.0493 -10.1456 10.0504 37 1 1.4639 -8.9301 6.0003 38 1 0.4570 -5.6211 5.4001 39 1 0.7093 -7.4049 5.1638 40 1 3.2630 -2.3716 4.3897 41 1 2.8307 1.0358 2.0624 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705262_13287814.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:22 Heat of formation + Delta-G solvation = -14.402031 kcal Electronic energy + Delta-G solvation = -26302.854839 eV Core-core repulsion = 22257.791060 eV Total energy + Delta-G solvation = -4045.063779 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 329.121 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -49.81613 -42.09067 -41.36137 -40.07768 -38.71687 -37.94454 -34.92049 -33.90779 -33.18678 -31.76636 -31.52813 -27.37893 -26.93589 -26.89661 -25.50828 -23.89671 -23.70366 -22.79093 -21.80938 -20.43670 -19.15329 -18.64216 -18.59455 -18.11442 -17.87363 -17.32884 -17.09530 -16.87491 -16.53386 -16.29717 -16.18566 -15.71213 -15.44914 -15.37581 -14.96612 -14.81506 -14.77375 -14.35620 -14.24813 -14.20548 -13.97158 -13.84885 -13.65567 -13.05835 -13.03547 -12.67346 -12.54290 -12.19390 -12.12541 -11.85751 -11.40876 -11.35988 -11.08151 -10.76719 -10.54965 -10.32961 -10.20550 -9.95357 -9.65980 -5.13467 -0.64801 -0.06863 0.11771 0.16767 1.08381 1.49911 1.64325 1.78283 1.83846 2.49693 2.54387 2.91684 3.14168 3.16178 3.32504 3.43981 3.47846 3.49589 3.58552 3.62632 3.69078 3.70583 3.79091 3.97398 3.99150 4.06161 4.12075 4.13927 4.32138 4.34580 4.47615 4.56687 4.64630 4.71003 4.76771 4.80817 4.84010 4.87120 4.95667 5.02551 5.11205 5.21486 5.27528 5.37992 5.48940 5.86778 6.24595 6.45652 6.55026 6.99642 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.070 4.070 3 Si 0.686 3.314 4 C -0.132 4.132 5 C 0.015 3.985 6 C -0.187 4.187 7 C 0.570 3.430 8 O -0.524 6.524 9 N -0.708 5.708 10 C 0.119 3.881 11 H 0.110 0.890 12 C -0.135 4.135 13 C -0.076 4.076 14 H 0.102 0.898 15 C -0.043 4.043 16 C -0.127 4.127 17 C -0.087 4.087 18 C -0.158 4.158 19 C 0.102 3.898 20 F -0.139 7.139 21 C -0.153 4.153 22 C -0.144 4.144 23 C 0.139 3.861 24 N -0.477 5.477 25 C 0.124 3.876 26 H 0.387 0.613 27 H 0.081 0.919 28 H -0.246 1.246 29 H -0.250 1.250 30 H 0.154 0.846 31 H 0.401 0.599 32 H 0.101 0.899 33 H 0.080 0.920 34 H 0.129 0.871 35 H 0.134 0.866 36 H 0.135 0.865 37 H 0.136 0.864 38 H 0.078 0.922 39 H 0.098 0.902 40 H 0.163 0.837 41 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.900 3.584 -0.896 4.154 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.181 4.181 3 Si 0.587 3.413 4 C -0.134 4.134 5 C -0.011 4.011 6 C -0.192 4.192 7 C 0.356 3.644 8 O -0.400 6.400 9 N -0.360 5.360 10 C 0.014 3.986 11 H 0.128 0.872 12 C -0.173 4.173 13 C -0.094 4.094 14 H 0.120 0.880 15 C -0.043 4.043 16 C -0.145 4.145 17 C -0.105 4.105 18 C -0.177 4.177 19 C 0.083 3.917 20 F -0.117 7.117 21 C -0.171 4.171 22 C -0.183 4.183 23 C -0.020 4.020 24 N -0.184 5.184 25 C -0.032 4.032 26 H 0.235 0.765 27 H 0.099 0.901 28 H -0.170 1.170 29 H -0.174 1.174 30 H 0.172 0.828 31 H 0.237 0.763 32 H 0.119 0.881 33 H 0.099 0.901 34 H 0.147 0.853 35 H 0.152 0.848 36 H 0.153 0.847 37 H 0.154 0.846 38 H 0.096 0.904 39 H 0.116 0.884 40 H 0.180 0.820 41 H 0.172 0.828 Dipole moment (debyes) X Y Z Total from point charges 2.482 3.816 0.104 4.553 hybrid contribution -0.275 -1.052 -0.012 1.087 sum 2.208 2.764 0.092 3.538 Atomic orbital electron populations 1.86491 1.16702 1.81960 1.49961 1.24607 0.86209 1.10716 0.96566 0.94863 0.81006 0.77701 0.87780 1.20413 1.00950 0.94720 0.97357 1.21623 0.91308 0.93161 0.95018 1.21015 1.04785 0.95033 0.98396 1.17957 0.78757 0.86302 0.81372 1.90823 1.39909 1.64412 1.44848 1.45550 1.57600 1.10058 1.22751 1.21893 0.96507 0.81001 0.99179 0.87232 1.23443 0.97724 1.02347 0.93768 1.21658 0.97840 0.97481 0.92413 0.87962 1.19500 0.96814 0.93578 0.94426 1.21149 1.00936 1.00000 0.92408 1.21053 0.97402 0.92155 0.99891 1.21219 1.02322 0.98807 0.95348 1.17714 0.99217 0.80614 0.94168 1.91527 1.86094 1.40268 1.93844 1.20999 1.03470 0.92952 0.99709 1.23593 0.96596 1.03545 0.94558 1.23025 0.92249 0.89426 0.97314 1.67705 1.19635 1.10620 1.20462 1.22735 0.92402 0.99570 0.88515 0.76504 0.90077 1.17008 1.17430 0.82788 0.76332 0.88051 0.90140 0.85301 0.84835 0.84680 0.84586 0.90367 0.88387 0.82028 0.82830 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.34 12.82 -35.23 -0.45 -0.11 16 2 C -0.07 0.08 2.81 36.00 0.10 0.18 16 3 Si 0.69 -1.60 29.88 -169.99 -5.08 -6.68 16 4 C -0.13 -0.20 5.39 -104.54 -0.56 -0.76 16 5 C 0.02 0.03 9.38 -38.87 -0.36 -0.33 16 6 C -0.19 -0.26 5.89 -104.82 -0.62 -0.88 16 7 C 0.57 1.10 7.78 -12.33 -0.10 1.00 16 8 O -0.52 -2.92 16.02 5.32 0.09 -2.84 16 9 N -0.71 0.88 5.22 -53.96 -0.28 0.60 16 10 C 0.12 -0.15 4.32 -67.12 -0.29 -0.44 16 11 H 0.11 0.04 7.46 -51.93 -0.39 -0.34 16 12 C -0.13 0.37 7.29 -25.92 -0.19 0.18 16 13 C -0.08 0.19 3.86 -90.95 -0.35 -0.16 16 14 H 0.10 -0.38 8.09 -51.93 -0.42 -0.80 16 15 C -0.04 0.04 5.29 -104.64 -0.55 -0.52 16 16 C -0.13 0.14 9.71 -39.58 -0.38 -0.25 16 17 C -0.09 0.07 10.04 -39.59 -0.40 -0.33 16 18 C -0.16 -0.07 10.03 -39.52 -0.40 -0.47 16 19 C 0.10 0.17 7.30 -39.42 -0.29 -0.12 16 20 F -0.14 -0.44 17.27 2.25 0.04 -0.40 16 21 C -0.15 -0.04 8.60 -39.51 -0.34 -0.38 16 22 C -0.14 0.22 7.25 -25.92 -0.19 0.03 16 23 C 0.14 0.05 10.71 -17.13 -0.18 -0.14 16 24 N -0.48 -1.15 10.35 -12.91 -0.13 -1.29 16 25 C 0.12 0.25 9.84 -17.47 -0.17 0.08 16 26 H 0.39 -2.21 8.74 45.56 0.40 -1.81 16 27 H 0.08 -0.23 7.96 -51.93 -0.41 -0.64 16 28 H -0.25 -0.16 7.05 56.52 0.40 0.24 16 29 H -0.25 0.01 7.11 56.52 0.40 0.41 16 30 H 0.15 0.32 7.74 -52.48 -0.41 -0.09 16 31 H 0.40 -1.57 6.77 -40.82 -0.28 -1.85 16 32 H 0.10 -0.26 7.73 -51.93 -0.40 -0.66 16 33 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 34 H 0.13 -0.38 8.05 -52.49 -0.42 -0.81 16 35 H 0.13 -0.37 8.06 -52.49 -0.42 -0.80 16 36 H 0.14 -0.11 8.06 -52.48 -0.42 -0.53 16 37 H 0.14 -0.12 6.64 -52.48 -0.35 -0.47 16 38 H 0.08 -0.05 8.14 -51.93 -0.42 -0.48 16 39 H 0.10 -0.15 6.29 -51.93 -0.33 -0.48 16 40 H 0.16 -0.54 6.42 -52.49 -0.34 -0.88 16 41 H 0.16 0.16 4.87 -52.48 -0.26 -0.10 16 LS Contribution 350.37 15.07 5.28 5.28 Total: 0.00 -9.20 350.37 -10.30 -19.50 By element: Atomic # 1 Polarization: -6.29 SS G_CDS: -4.49 Total: -10.78 kcal Atomic # 6 Polarization: 1.98 SS G_CDS: -5.27 Total: -3.30 kcal Atomic # 7 Polarization: -0.27 SS G_CDS: -0.42 Total: -0.68 kcal Atomic # 8 Polarization: -2.58 SS G_CDS: -0.37 Total: -2.95 kcal Atomic # 9 Polarization: -0.44 SS G_CDS: 0.04 Total: -0.40 kcal Atomic # 14 Polarization: -1.60 SS G_CDS: -5.08 Total: -6.68 kcal Total LS contribution 5.28 Total: 5.28 kcal Total: -9.20 -10.30 -19.50 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705262_13287814.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 5.101 kcal (2) G-P(sol) polarization free energy of solvation -9.200 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -4.100 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.302 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.503 kcal (6) G-S(sol) free energy of system = (1) + (5) -14.402 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds