Wall clock time and date at job start Tue Mar 9 2021 12:59:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46895 * 1 3 3 C 1.46902 * 111.00252 * 2 1 4 4 C 1.39055 * 111.00035 * 123.95385 * 2 1 3 5 5 C 1.39193 * 119.93056 * 119.72040 * 4 2 1 6 6 C 1.50696 * 119.96635 * 0.02562 * 5 4 2 7 7 O 1.42894 * 109.47600 * 74.99689 * 6 5 4 8 8 Si 1.86303 * 109.46891 * 194.99817 * 6 5 4 9 9 C 1.37634 * 120.06434 * 179.72274 * 5 4 2 10 10 C 1.39767 * 119.93255 * 0.55656 * 9 5 4 11 11 C 1.47526 * 120.06992 * 179.74323 * 10 9 5 12 12 O 1.21588 * 119.99786 * 359.97438 * 11 10 9 13 13 N 1.34776 * 120.00027 * 179.97438 * 11 10 9 14 14 C 1.46496 * 120.00264 * 179.97438 * 13 11 10 15 15 H 1.09004 * 112.84540 * 25.33560 * 14 13 11 16 16 C 1.53782 * 113.61417 * 156.52785 * 14 13 11 17 17 C 1.53785 * 87.07890 * 89.12164 * 16 14 13 18 18 H 1.09000 * 113.60747 * 270.88264 * 17 16 14 19 19 C 1.50694 * 113.61399 * 140.06556 * 17 16 14 20 20 C 1.38176 * 119.98742 * 299.72499 * 19 17 16 21 21 C 1.38490 * 119.97496 * 179.73241 * 20 19 17 22 22 F 1.35098 * 120.02631 * 180.25411 * 21 20 19 23 23 C 1.38435 * 119.94494 * 0.53817 * 21 20 19 24 24 C 1.38222 * 119.97697 * 359.73469 * 23 21 20 25 25 C 1.38223 * 120.02684 * 359.97438 * 24 23 21 26 26 C 1.53774 * 113.61684 * 254.13628 * 14 13 11 27 27 C 1.39822 * 119.86217 * 359.72097 * 10 9 5 28 28 C 1.37581 * 119.92812 * 359.97438 * 27 10 9 29 29 H 1.09002 * 109.47411 * 296.05070 * 1 2 3 30 30 H 1.09007 * 109.47071 * 56.04643 * 1 2 3 31 31 H 1.08996 * 109.47424 * 176.04443 * 1 2 3 32 32 H 1.09000 * 109.46807 * 183.95307 * 3 2 1 33 33 H 1.08997 * 109.46913 * 303.94937 * 3 2 1 34 34 H 1.09005 * 109.47092 * 63.95447 * 3 2 1 35 35 H 1.08998 * 109.47275 * 314.98852 * 6 5 4 36 36 H 0.96707 * 114.00239 * 59.99986 * 7 6 5 37 37 H 1.48502 * 110.00396 * 58.67916 * 8 6 5 38 38 H 1.48507 * 110.00005 * 179.97438 * 8 6 5 39 39 H 1.08004 * 120.03161 * 180.25804 * 9 5 4 40 40 H 0.97012 * 119.99800 * 359.97438 * 13 11 10 41 41 H 1.09000 * 113.61097 * 203.66878 * 16 14 13 42 42 H 1.08994 * 113.61977 * 334.48768 * 16 14 13 43 43 H 1.07995 * 120.01172 * 359.97438 * 20 19 17 44 44 H 1.08004 * 120.01244 * 179.75120 * 23 21 20 45 45 H 1.08000 * 119.98623 * 180.02562 * 24 23 21 46 46 H 1.07991 * 119.97746 * 180.02562 * 25 24 23 47 47 H 1.09006 * 113.61262 * 25.43482 * 26 14 13 48 48 H 1.09001 * 113.61545 * 156.32731 * 26 14 13 49 49 H 1.07995 * 120.03383 * 180.02562 * 27 10 9 50 50 H 1.08004 * 119.96174 * 179.97438 * 28 27 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9955 1.3714 0.0000 4 6 1.9673 -0.7251 1.0768 5 6 2.7745 -1.8365 0.8518 6 6 3.1075 -2.2518 -0.5580 7 8 4.0788 -1.3559 -1.1018 8 14 3.7957 -3.9830 -0.5492 9 6 3.2739 -2.5528 1.9156 10 6 2.9602 -2.1700 3.2228 11 6 3.4893 -2.9390 4.3653 12 8 4.1986 -3.9071 4.1702 13 7 3.1863 -2.5684 5.6252 14 6 3.7112 -3.3323 6.7597 15 1 4.6339 -3.8620 6.5226 16 6 3.7829 -2.5241 8.0660 17 6 2.3460 -2.9960 8.3447 18 1 1.5823 -2.3356 7.9338 19 6 2.0969 -3.3526 9.7874 20 6 2.8295 -4.3594 10.3864 21 6 2.6041 -4.6832 11.7140 22 9 3.3234 -5.6639 12.3021 23 6 1.6371 -4.0050 12.4361 24 6 0.9016 -3.0021 11.8332 25 6 1.1315 -2.6757 10.5099 26 6 2.6561 -4.2118 7.4510 27 6 2.1444 -1.0566 3.4454 28 6 1.6534 -0.3409 2.3779 29 1 -0.3634 0.4513 0.9233 30 1 -0.3633 0.5740 -0.8525 31 1 -0.3634 -1.0252 -0.0709 32 1 3.0828 1.3431 -0.0708 33 1 1.5899 1.9163 -0.8525 34 1 1.7044 1.8724 0.9233 35 1 2.2048 -2.2230 -1.1682 36 1 4.9100 -1.3300 -0.6082 37 1 2.8073 -4.9196 0.0433 38 1 4.1277 -4.4048 -1.9339 39 1 3.9036 -3.4126 1.7405 40 1 2.6207 -1.7957 5.7807 41 1 4.5142 -2.9081 8.7773 42 1 3.8683 -1.4488 7.9102 43 1 3.5803 -4.8910 9.8207 44 1 1.4577 -4.2594 13.4703 45 1 0.1474 -2.4726 12.3965 46 1 0.5567 -1.8917 10.0397 47 1 1.8309 -4.4980 6.7988 48 1 3.0798 -5.0564 7.9944 49 1 1.9006 -0.7581 4.4543 50 1 1.0228 0.5190 2.5492 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705262_13422196.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:40 Heat of formation + Delta-G solvation = -12.105115 kcal Electronic energy + Delta-G solvation = -32731.632409 eV Core-core repulsion = 28220.055375 eV Total energy + Delta-G solvation = -4511.577034 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 371.168 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -49.82153 -41.92730 -41.29224 -40.15786 -38.77195 -37.79670 -37.18305 -34.76926 -32.84826 -31.98108 -31.55924 -31.12466 -28.65422 -26.93851 -26.91191 -26.88364 -25.77218 -23.92050 -23.37923 -22.92693 -22.66457 -21.36103 -20.40293 -19.16109 -18.56315 -17.86303 -17.68383 -17.35003 -17.23172 -17.10084 -16.59345 -16.53381 -16.38196 -16.10648 -16.03650 -15.67088 -15.53039 -15.47141 -15.05260 -14.90922 -14.80866 -14.69069 -14.25113 -14.17490 -13.96116 -13.91324 -13.69884 -13.58219 -13.20737 -13.11048 -13.04932 -12.94920 -12.74192 -12.59265 -12.54584 -12.12006 -12.07812 -11.91538 -11.84084 -11.34047 -11.01334 -10.32353 -10.22513 -10.15828 -9.96374 -9.81901 -9.66572 -9.59706 -4.92113 -0.40666 0.09588 0.11100 0.16114 1.36734 1.66086 1.74564 1.93985 2.06046 2.49216 2.61172 2.71438 3.15941 3.32726 3.44405 3.48534 3.50861 3.58922 3.61657 3.69736 3.75266 3.79942 3.93592 3.98202 4.04917 4.05866 4.13227 4.17465 4.23719 4.31880 4.36610 4.45784 4.48771 4.49805 4.57915 4.60167 4.64764 4.73169 4.75995 4.80229 4.82299 4.86929 4.90916 4.96294 4.98438 5.01853 5.06902 5.10832 5.20784 5.27181 5.39803 5.48366 5.52560 5.74237 5.86126 6.21825 6.35131 6.69073 7.10771 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 N -0.509 5.509 3 C 0.032 3.968 4 C 0.144 3.856 5 C -0.107 4.107 6 C -0.044 4.044 7 O -0.529 6.529 8 Si 0.666 3.334 9 C -0.047 4.047 10 C -0.137 4.137 11 C 0.563 3.437 12 O -0.528 6.528 13 N -0.710 5.710 14 C 0.120 3.880 15 H 0.109 0.891 16 C -0.135 4.135 17 C -0.075 4.075 18 H 0.101 0.899 19 C -0.043 4.043 20 C -0.152 4.152 21 C 0.102 3.898 22 F -0.139 7.139 23 C -0.158 4.158 24 C -0.087 4.087 25 C -0.127 4.127 26 C -0.145 4.145 27 C -0.069 4.069 28 C -0.158 4.158 29 H 0.033 0.967 30 H 0.078 0.922 31 H 0.070 0.930 32 H 0.076 0.924 33 H 0.075 0.925 34 H 0.030 0.970 35 H 0.119 0.881 36 H 0.373 0.627 37 H -0.256 1.256 38 H -0.251 1.251 39 H 0.145 0.855 40 H 0.400 0.600 41 H 0.100 0.900 42 H 0.079 0.921 43 H 0.137 0.863 44 H 0.135 0.865 45 H 0.133 0.867 46 H 0.128 0.872 47 H 0.077 0.923 48 H 0.097 0.903 49 H 0.128 0.872 50 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.173 5.430 2.443 6.338 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 N -0.229 5.229 3 C -0.114 4.114 4 C 0.049 3.951 5 C -0.109 4.109 6 C -0.155 4.155 7 O -0.333 6.333 8 Si 0.568 3.432 9 C -0.066 4.066 10 C -0.140 4.140 11 C 0.351 3.649 12 O -0.404 6.404 13 N -0.362 5.362 14 C 0.015 3.985 15 H 0.127 0.873 16 C -0.173 4.173 17 C -0.094 4.094 18 H 0.119 0.881 19 C -0.043 4.043 20 C -0.171 4.171 21 C 0.083 3.917 22 F -0.117 7.117 23 C -0.177 4.177 24 C -0.105 4.105 25 C -0.145 4.145 26 C -0.183 4.183 27 C -0.089 4.089 28 C -0.178 4.178 29 H 0.051 0.949 30 H 0.096 0.904 31 H 0.089 0.911 32 H 0.095 0.905 33 H 0.094 0.906 34 H 0.048 0.952 35 H 0.137 0.863 36 H 0.220 0.780 37 H -0.181 1.181 38 H -0.175 1.175 39 H 0.163 0.837 40 H 0.236 0.764 41 H 0.119 0.881 42 H 0.098 0.902 43 H 0.154 0.846 44 H 0.153 0.847 45 H 0.151 0.849 46 H 0.146 0.854 47 H 0.096 0.904 48 H 0.115 0.885 49 H 0.145 0.855 50 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -2.055 3.744 1.145 4.421 hybrid contribution -1.178 1.043 1.161 1.955 sum -3.233 4.786 2.306 6.219 Atomic orbital electron populations 1.22520 0.85511 1.02901 1.01326 1.59396 1.08368 1.14804 1.40343 1.22439 1.01598 0.86475 1.00871 1.18832 0.94203 0.93255 0.88764 1.20311 0.98747 0.95515 0.96283 1.24826 0.95686 1.03527 0.91491 1.86565 1.26690 1.65341 1.54728 0.95064 0.89431 0.75278 0.83439 1.21052 0.96797 0.98116 0.90632 1.19827 1.02491 0.98113 0.93561 1.18147 0.80104 0.83943 0.82691 1.90819 1.37140 1.27273 1.85188 1.45574 1.52956 1.32596 1.05043 1.21861 0.98218 0.93502 0.84928 0.87317 1.23428 0.96323 1.01059 0.96458 1.21689 0.97916 0.98824 0.90931 0.88087 1.19511 0.94925 0.94561 0.95295 1.21002 1.02611 1.00014 0.93469 1.17715 0.93298 0.88853 0.91827 1.91527 1.76339 1.59728 1.84127 1.21219 0.97116 0.98196 1.01196 1.21050 0.98519 0.96065 0.94888 1.21140 0.98415 1.00528 0.94460 1.23632 0.99786 0.96880 0.98010 1.21142 0.95113 0.93503 0.99094 1.21649 1.02071 1.01193 0.92933 0.94881 0.90366 0.91106 0.90525 0.90574 0.95185 0.86334 0.78046 1.18088 1.17544 0.83748 0.76407 0.88115 0.90226 0.84561 0.84688 0.84863 0.85363 0.90430 0.88474 0.85461 0.85280 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.03 9.34 60.06 0.56 0.53 16 2 N -0.51 -0.11 4.20 -186.86 -0.78 -0.89 16 3 C 0.03 -0.03 9.38 60.07 0.56 0.53 16 4 C 0.14 0.04 4.70 -83.86 -0.39 -0.36 16 5 C -0.11 -0.06 5.27 -104.49 -0.55 -0.61 16 6 C -0.04 -0.03 2.33 36.00 0.08 0.05 16 7 O -0.53 -0.40 12.88 -35.23 -0.45 -0.86 16 8 Si 0.67 0.36 29.92 -169.99 -5.09 -4.73 16 9 C -0.05 -0.03 8.19 -39.23 -0.32 -0.35 16 10 C -0.14 -0.02 5.88 -104.95 -0.62 -0.63 16 11 C 0.56 0.68 7.76 -12.47 -0.10 0.58 16 12 O -0.53 -2.50 15.95 5.29 0.08 -2.41 16 13 N -0.71 1.21 5.21 -54.06 -0.28 0.93 16 14 C 0.12 -0.19 4.30 -67.12 -0.29 -0.48 16 15 H 0.11 0.00 7.50 -51.93 -0.39 -0.39 16 16 C -0.13 0.41 7.29 -25.92 -0.19 0.22 16 17 C -0.08 0.21 3.87 -90.82 -0.35 -0.14 16 18 H 0.10 -0.40 8.09 -51.93 -0.42 -0.82 16 19 C -0.04 0.05 5.29 -104.63 -0.55 -0.51 16 20 C -0.15 0.00 8.61 -39.51 -0.34 -0.34 16 21 C 0.10 0.14 7.30 -39.42 -0.29 -0.14 16 22 F -0.14 -0.41 17.27 2.25 0.04 -0.37 16 23 C -0.16 -0.03 10.03 -39.51 -0.40 -0.43 16 24 C -0.09 0.09 10.04 -39.59 -0.40 -0.31 16 25 C -0.13 0.18 9.71 -39.57 -0.38 -0.21 16 26 C -0.14 0.25 7.27 -25.78 -0.19 0.07 16 27 C -0.07 0.13 9.53 -39.23 -0.37 -0.25 16 28 C -0.16 0.19 8.53 -39.45 -0.34 -0.15 16 29 H 0.03 -0.06 7.10 -51.93 -0.37 -0.43 16 30 H 0.08 -0.13 8.12 -51.92 -0.42 -0.56 16 31 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 32 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 33 H 0.08 -0.10 8.12 -51.93 -0.42 -0.52 16 34 H 0.03 -0.05 7.32 -51.93 -0.38 -0.43 16 35 H 0.12 0.21 7.77 -51.93 -0.40 -0.19 16 36 H 0.37 -1.10 8.70 45.56 0.40 -0.70 16 37 H -0.26 -0.84 7.11 56.52 0.40 -0.44 16 38 H -0.25 -0.86 7.11 56.52 0.40 -0.46 16 39 H 0.15 0.04 4.70 -52.48 -0.25 -0.21 16 40 H 0.40 -1.71 6.72 -40.81 -0.27 -1.98 16 41 H 0.10 -0.29 7.73 -51.93 -0.40 -0.69 16 42 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 43 H 0.14 -0.15 6.65 -52.49 -0.35 -0.50 16 44 H 0.14 -0.14 8.06 -52.48 -0.42 -0.56 16 45 H 0.13 -0.41 8.06 -52.49 -0.42 -0.83 16 46 H 0.13 -0.43 8.05 -52.49 -0.42 -0.85 16 47 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 48 H 0.10 -0.17 6.31 -51.93 -0.33 -0.50 16 49 H 0.13 -0.60 6.39 -52.49 -0.34 -0.94 16 50 H 0.13 -0.32 6.99 -52.48 -0.37 -0.69 16 LS Contribution 409.20 15.07 6.17 6.17 Total: 0.00 -7.85 409.20 -12.04 -19.89 By element: Atomic # 1 Polarization: -7.95 SS G_CDS: -6.87 Total: -14.82 kcal Atomic # 6 Polarization: 1.96 SS G_CDS: -4.86 Total: -2.90 kcal Atomic # 7 Polarization: 1.10 SS G_CDS: -1.07 Total: 0.03 kcal Atomic # 8 Polarization: -2.90 SS G_CDS: -0.37 Total: -3.27 kcal Atomic # 9 Polarization: -0.41 SS G_CDS: 0.04 Total: -0.37 kcal Atomic # 14 Polarization: 0.36 SS G_CDS: -5.09 Total: -4.73 kcal Total LS contribution 6.17 Total: 6.17 kcal Total: -7.85 -12.04 -19.89 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705262_13422196.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 7.782 kcal (2) G-P(sol) polarization free energy of solvation -7.846 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -0.064 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.041 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.887 kcal (6) G-S(sol) free energy of system = (1) + (5) -12.105 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds