Wall clock time and date at job start Tue Mar 9 2021 13:00:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86300 * 109.47190 * 2 1 4 4 C 1.50697 * 109.47590 * 239.99812 * 2 1 3 5 5 C 1.38714 * 120.02909 * 284.72404 * 4 2 1 6 6 O 1.35894 * 120.05237 * 359.97438 * 5 4 2 7 7 C 1.42906 * 116.99812 * 179.97438 * 6 5 4 8 8 C 1.50698 * 109.47014 * 180.02562 * 7 6 5 9 9 O 1.21283 * 120.00281 * 359.97438 * 8 7 6 10 10 N 1.34782 * 119.99848 * 180.02562 * 8 7 6 11 11 C 1.46503 * 119.99806 * 179.97438 * 10 8 7 12 12 H 1.08994 * 112.84879 * 336.18670 * 11 10 8 13 13 C 1.53780 * 113.61533 * 107.49980 * 11 10 8 14 14 C 1.53776 * 87.08325 * 89.11226 * 13 11 10 15 15 H 1.09004 * 113.61655 * 270.88722 * 14 13 11 16 16 C 1.50696 * 113.69269 * 139.99107 * 14 13 11 17 17 C 1.38184 * 119.98558 * 322.19249 * 16 14 13 18 18 C 1.38477 * 119.97169 * 179.74554 * 17 16 14 19 19 F 1.35101 * 120.02762 * 180.27274 * 18 17 16 20 20 C 1.38443 * 119.94905 * 0.50633 * 18 17 16 21 21 C 1.38217 * 119.97434 * 359.74442 * 20 18 17 22 22 C 1.38218 * 120.02355 * 0.02695 * 21 20 18 23 23 C 1.53779 * 113.61021 * 204.99581 * 11 10 8 24 24 C 1.38757 * 119.88828 * 179.74287 * 5 4 2 25 25 C 1.38126 * 119.94230 * 0.53132 * 24 5 4 26 26 C 1.38288 * 120.05611 * 359.72206 * 25 24 5 27 27 C 1.38165 * 120.02832 * 104.99735 * 4 2 1 28 28 H 0.96695 * 114.00385 * 300.00492 * 1 2 3 29 29 H 1.09001 * 109.47255 * 120.00067 * 2 1 3 30 30 H 1.48506 * 110.00048 * 300.00131 * 3 2 1 31 31 H 1.48502 * 109.99996 * 61.31456 * 3 2 1 32 32 H 1.09001 * 109.47031 * 299.99942 * 7 6 5 33 33 H 1.08997 * 109.47073 * 60.00046 * 7 6 5 34 34 H 0.97000 * 120.00020 * 359.97438 * 10 8 7 35 35 H 1.09004 * 113.61216 * 203.66324 * 13 11 10 36 36 H 1.09002 * 113.61580 * 334.56098 * 13 11 10 37 37 H 1.07994 * 120.01326 * 359.97438 * 17 16 14 38 38 H 1.07998 * 120.00948 * 179.77019 * 20 18 17 39 39 H 1.08004 * 119.98506 * 179.97438 * 21 20 18 40 40 H 1.08008 * 119.97244 * 179.97438 * 22 21 20 41 41 H 1.08996 * 113.61572 * 25.43394 * 23 11 10 42 42 H 1.09004 * 113.61293 * 156.33305 * 23 11 10 43 43 H 1.07993 * 120.02731 * 180.27390 * 24 5 4 44 44 H 1.07997 * 119.96896 * 179.74483 * 25 24 5 45 45 H 1.08001 * 119.94563 * 180.02562 * 26 25 24 46 46 H 1.08005 * 119.97560 * 359.97438 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 1.8751 -2.0944 -1.3045 6 8 1.3673 -2.8114 -0.2677 7 6 1.3399 -4.2327 -0.4137 8 6 0.7478 -4.8535 0.8253 9 8 0.3854 -4.1484 1.7431 10 7 0.6219 -6.1925 0.9138 11 6 0.0468 -6.7961 2.1185 12 1 0.1414 -6.1588 2.9976 13 6 -1.3703 -7.3560 1.9106 14 6 -0.7025 -8.6795 1.5017 15 1 -0.4794 -8.7453 0.4367 16 6 -1.4087 -9.9021 2.0283 17 6 -1.9615 -9.8886 3.2946 18 6 -2.6150 -11.0105 3.7762 19 9 -3.1606 -10.9967 5.0120 20 6 -2.7045 -12.1480 2.9921 21 6 -2.1464 -12.1609 1.7277 22 6 -1.4984 -11.0389 1.2463 23 6 0.4998 -8.2462 2.3572 24 6 2.3336 -2.7452 -2.4410 25 6 2.8549 -2.0145 -3.4908 26 6 2.9148 -0.6352 -3.4123 27 6 2.4537 0.0159 -2.2833 28 1 -0.3934 0.4417 0.7649 29 1 1.7923 -0.5138 0.8900 30 1 1.5614 2.4679 -1.2085 31 1 1.5878 2.4586 1.2242 32 1 0.7317 -4.4975 -1.2785 33 1 2.3551 -4.6029 -0.5564 34 1 0.9121 -6.7565 0.1799 35 1 -1.9513 -7.4260 2.8302 36 1 -1.9159 -6.8734 1.0997 37 1 -1.8871 -9.0023 3.9071 38 1 -3.2108 -13.0248 3.3682 39 1 -2.2158 -13.0483 1.1161 40 1 -1.0622 -11.0500 0.2583 41 1 1.4639 -8.4822 1.9069 42 1 0.4300 -8.5595 3.3989 43 1 2.2867 -3.8224 -2.5029 44 1 3.2157 -2.5209 -4.3739 45 1 3.3224 -0.0656 -4.2344 46 1 2.5015 1.0933 -2.2245 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705262_2989392.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:00:11 Heat of formation + Delta-G solvation = -58.238298 kcal Electronic energy + Delta-G solvation = -30231.463810 eV Core-core repulsion = 25775.705248 eV Total energy + Delta-G solvation = -4455.758562 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.141 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -49.82519 -41.82628 -41.32042 -40.23889 -38.93223 -38.19470 -37.45633 -34.72259 -32.86303 -32.08433 -31.56303 -31.19814 -29.41221 -26.90694 -26.57671 -26.34673 -24.02750 -23.55284 -22.77234 -22.45655 -21.81588 -20.41044 -19.32925 -18.73353 -18.37730 -18.14931 -17.42298 -17.35032 -17.28705 -17.10270 -16.87135 -16.73600 -16.53640 -15.91209 -15.59711 -15.53563 -15.37342 -15.15219 -14.95880 -14.85614 -14.61468 -14.26070 -13.98046 -13.80175 -13.77423 -13.70531 -13.53412 -13.07135 -13.03135 -12.97132 -12.67343 -12.55762 -12.16922 -12.13047 -11.85650 -11.74741 -11.66405 -11.36973 -10.92462 -10.27098 -10.24516 -9.96458 -9.95592 -9.67160 -9.18336 -4.89983 0.10504 0.15628 0.24520 0.44080 1.37320 1.39752 1.44203 1.65630 2.00806 2.48773 2.51728 2.67621 3.14901 3.32030 3.40652 3.46972 3.49779 3.54072 3.68167 3.73504 3.77579 3.84913 3.89199 3.91855 3.97079 4.04756 4.12235 4.12334 4.27248 4.31362 4.34756 4.47032 4.51848 4.56062 4.64741 4.67178 4.70817 4.79788 4.84469 4.94688 4.98286 5.01315 5.10240 5.25909 5.27494 5.36572 5.38019 5.48058 5.51709 5.71311 5.85614 6.20620 6.35898 6.63830 7.05253 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.066 4.066 3 Si 0.685 3.315 4 C -0.100 4.100 5 C 0.150 3.850 6 O -0.279 6.279 7 C 0.039 3.961 8 C 0.519 3.481 9 O -0.507 6.507 10 N -0.711 5.711 11 C 0.121 3.879 12 H 0.108 0.892 13 C -0.145 4.145 14 C -0.075 4.075 15 H 0.102 0.898 16 C -0.043 4.043 17 C -0.153 4.153 18 C 0.102 3.898 19 F -0.139 7.139 20 C -0.158 4.158 21 C -0.087 4.087 22 C -0.127 4.127 23 C -0.134 4.134 24 C -0.212 4.212 25 C -0.073 4.073 26 C -0.151 4.151 27 C -0.078 4.078 28 H 0.378 0.622 29 H 0.077 0.923 30 H -0.255 1.255 31 H -0.261 1.261 32 H 0.094 0.906 33 H 0.095 0.905 34 H 0.403 0.597 35 H 0.097 0.903 36 H 0.077 0.923 37 H 0.136 0.864 38 H 0.135 0.865 39 H 0.134 0.866 40 H 0.129 0.871 41 H 0.080 0.920 42 H 0.100 0.900 43 H 0.130 0.870 44 H 0.129 0.871 45 H 0.130 0.870 46 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.760 -3.862 -4.259 7.464 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.176 4.176 3 Si 0.586 3.414 4 C -0.101 4.101 5 C 0.105 3.895 6 O -0.191 6.191 7 C -0.040 4.040 8 C 0.304 3.696 9 O -0.380 6.380 10 N -0.365 5.365 11 C 0.016 3.984 12 H 0.126 0.874 13 C -0.183 4.183 14 C -0.093 4.093 15 H 0.120 0.880 16 C -0.043 4.043 17 C -0.171 4.171 18 C 0.083 3.917 19 F -0.117 7.117 20 C -0.177 4.177 21 C -0.105 4.105 22 C -0.145 4.145 23 C -0.172 4.172 24 C -0.231 4.231 25 C -0.091 4.091 26 C -0.169 4.169 27 C -0.096 4.096 28 H 0.225 0.775 29 H 0.095 0.905 30 H -0.180 1.180 31 H -0.186 1.186 32 H 0.112 0.888 33 H 0.113 0.887 34 H 0.237 0.763 35 H 0.115 0.885 36 H 0.096 0.904 37 H 0.154 0.846 38 H 0.153 0.847 39 H 0.152 0.848 40 H 0.147 0.853 41 H 0.099 0.901 42 H 0.119 0.881 43 H 0.147 0.853 44 H 0.147 0.853 45 H 0.148 0.852 46 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 4.278 -2.717 -3.883 6.384 hybrid contribution -1.137 -0.873 0.145 1.441 sum 3.141 -3.590 -3.738 6.060 Atomic orbital electron populations 1.86595 1.17669 1.80110 1.49372 1.24639 0.84619 1.10248 0.98078 0.95223 0.91424 0.74698 0.80009 1.18591 1.04402 0.90189 0.96899 1.18775 0.93257 0.90784 0.86724 1.86204 1.77784 1.16706 1.38434 1.22454 1.02566 0.81525 0.97407 1.20036 0.78886 0.82357 0.88314 1.90789 1.47146 1.60978 1.39119 1.45472 1.64747 1.06195 1.20102 1.21856 0.93641 0.94246 0.88629 0.87376 1.23590 0.96768 0.94821 1.03151 1.21646 0.96143 0.91547 0.99975 0.87967 1.19508 0.96729 0.95104 0.93000 1.20999 1.00825 0.98160 0.97144 1.17715 0.97478 0.95480 0.81023 1.91528 1.83567 1.97012 1.39618 1.21222 1.03166 0.97897 0.95416 1.21052 0.96079 0.98653 0.94729 1.21140 1.00297 0.92757 1.00310 1.23440 0.98078 0.94102 1.01615 1.21258 1.06633 1.00387 0.94795 1.21016 0.96337 0.94081 0.97669 1.21054 1.02808 0.94578 0.98448 1.20993 0.96501 0.99885 0.92187 0.77474 0.90543 1.18015 1.18643 0.88816 0.88712 0.76280 0.88471 0.90407 0.84602 0.84677 0.84837 0.85322 0.90146 0.88122 0.85259 0.85316 0.85222 0.84784 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -2.20 12.86 -35.23 -0.45 -2.66 16 2 C -0.07 -0.17 2.37 36.00 0.09 -0.08 16 3 Si 0.68 0.34 30.20 -169.99 -5.13 -4.80 16 4 C -0.10 -0.29 5.30 -104.47 -0.55 -0.84 16 5 C 0.15 0.40 6.66 -39.21 -0.26 0.14 16 6 O -0.28 -0.96 9.00 -39.32 -0.35 -1.31 16 7 C 0.04 -0.03 5.22 36.00 0.19 0.16 16 8 C 0.52 0.60 7.91 -10.98 -0.09 0.52 16 9 O -0.51 -3.14 16.10 -14.35 -0.23 -3.38 16 10 N -0.71 1.59 5.26 -53.02 -0.28 1.31 16 11 C 0.12 -0.19 4.32 -67.12 -0.29 -0.48 16 12 H 0.11 0.05 7.46 -51.93 -0.39 -0.34 16 13 C -0.14 0.25 7.26 -25.92 -0.19 0.06 16 14 C -0.07 0.22 3.85 -90.96 -0.35 -0.13 16 15 H 0.10 -0.44 8.09 -51.93 -0.42 -0.86 16 16 C -0.04 0.05 5.29 -104.63 -0.55 -0.50 16 17 C -0.15 -0.01 8.58 -39.51 -0.34 -0.35 16 18 C 0.10 0.15 7.30 -39.42 -0.29 -0.14 16 19 F -0.14 -0.42 17.27 2.25 0.04 -0.38 16 20 C -0.16 -0.04 10.03 -39.51 -0.40 -0.43 16 21 C -0.09 0.09 10.04 -39.60 -0.40 -0.31 16 22 C -0.13 0.18 9.71 -39.58 -0.38 -0.20 16 23 C -0.13 0.42 7.29 -25.92 -0.19 0.23 16 24 C -0.21 -0.05 9.04 -39.43 -0.36 -0.41 16 25 C -0.07 0.02 10.04 -39.60 -0.40 -0.37 16 26 C -0.15 -0.02 10.04 -39.56 -0.40 -0.42 16 27 C -0.08 -0.10 8.66 -39.61 -0.34 -0.45 16 28 H 0.38 0.15 8.74 45.56 0.40 0.55 16 29 H 0.08 0.19 7.82 -51.93 -0.41 -0.21 16 30 H -0.26 -0.70 6.75 56.52 0.38 -0.32 16 31 H -0.26 -0.68 7.11 56.52 0.40 -0.28 16 32 H 0.09 -0.28 7.65 -51.93 -0.40 -0.68 16 33 H 0.10 -0.34 7.67 -51.93 -0.40 -0.74 16 34 H 0.40 -2.19 8.70 -40.82 -0.36 -2.55 16 35 H 0.10 -0.15 6.33 -51.93 -0.33 -0.48 16 36 H 0.08 -0.07 8.14 -51.93 -0.42 -0.50 16 37 H 0.14 -0.13 6.68 -52.49 -0.35 -0.48 16 38 H 0.14 -0.13 8.06 -52.49 -0.42 -0.56 16 39 H 0.13 -0.41 8.06 -52.48 -0.42 -0.84 16 40 H 0.13 -0.44 8.05 -52.48 -0.42 -0.86 16 41 H 0.08 -0.31 8.14 -51.93 -0.42 -0.74 16 42 H 0.10 -0.28 7.71 -51.93 -0.40 -0.68 16 43 H 0.13 -0.33 6.30 -52.49 -0.33 -0.66 16 44 H 0.13 -0.34 8.06 -52.49 -0.42 -0.76 16 45 H 0.13 -0.25 8.06 -52.49 -0.42 -0.68 16 46 H 0.13 0.00 4.90 -52.48 -0.26 -0.26 16 LS Contribution 388.09 15.07 5.85 5.85 Total: 0.00 -10.43 388.09 -11.87 -22.30 By element: Atomic # 1 Polarization: -7.11 SS G_CDS: -5.81 Total: -12.92 kcal Atomic # 6 Polarization: 1.48 SS G_CDS: -5.50 Total: -4.02 kcal Atomic # 7 Polarization: 1.59 SS G_CDS: -0.28 Total: 1.31 kcal Atomic # 8 Polarization: -6.30 SS G_CDS: -1.04 Total: -7.34 kcal Atomic # 9 Polarization: -0.42 SS G_CDS: 0.04 Total: -0.38 kcal Atomic # 14 Polarization: 0.34 SS G_CDS: -5.13 Total: -4.80 kcal Total LS contribution 5.85 Total: 5.85 kcal Total: -10.43 -11.87 -22.30 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705262_2989392.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -35.934 kcal (2) G-P(sol) polarization free energy of solvation -10.431 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -46.365 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.874 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.304 kcal (6) G-S(sol) free energy of system = (1) + (5) -58.238 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds