Wall clock time and date at job start Tue Mar 9 2021 13:00:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86300 * 109.47190 * 2 1 4 4 C 1.50697 * 109.47590 * 239.99812 * 2 1 3 5 5 C 1.38271 * 119.94391 * 119.72423 * 4 2 1 6 6 C 1.38148 * 120.05274 * 179.72564 * 5 4 2 7 7 C 1.38729 * 119.94505 * 0.52938 * 6 5 4 8 8 O 1.35902 * 120.05599 * 179.72347 * 7 6 5 9 9 C 1.42900 * 117.00000 * 0.02562 * 8 7 6 10 10 C 1.50697 * 109.47073 * 180.02562 * 9 8 7 11 11 O 1.21283 * 120.00090 * 359.97438 * 10 9 8 12 12 N 1.34776 * 119.99927 * 180.02562 * 10 9 8 13 13 C 1.46500 * 120.00065 * 179.97438 * 12 10 9 14 14 H 1.08999 * 112.84696 * 25.34015 * 13 12 10 15 15 C 1.53780 * 113.61213 * 156.52865 * 13 12 10 16 16 C 1.53781 * 87.08127 * 89.12352 * 15 13 12 17 17 H 1.09005 * 113.61134 * 270.80481 * 16 15 13 18 18 C 1.50696 * 113.61770 * 139.97930 * 16 15 13 19 19 C 1.38224 * 119.98720 * 120.00205 * 18 16 15 20 20 C 1.38264 * 120.05371 * 179.97438 * 19 18 16 21 21 C 1.38180 * 120.02145 * 0.02562 * 20 19 18 22 22 C 1.38478 * 119.97738 * 359.97438 * 21 20 19 23 23 F 1.35096 * 120.02442 * 180.02562 * 22 21 20 24 24 C 1.38217 * 119.98815 * 299.72403 * 18 16 15 25 25 C 1.53778 * 113.61962 * 254.14149 * 13 12 10 26 26 C 1.38736 * 119.88859 * 359.74735 * 7 6 5 27 27 C 1.38143 * 119.94242 * 359.97438 * 26 7 6 28 28 H 0.96695 * 114.00385 * 300.00492 * 1 2 3 29 29 H 1.09001 * 109.47255 * 120.00067 * 2 1 3 30 30 H 1.48506 * 110.00048 * 300.00131 * 3 2 1 31 31 H 1.48502 * 109.99996 * 61.31456 * 3 2 1 32 32 H 1.07996 * 119.97091 * 359.97438 * 5 4 2 33 33 H 1.07997 * 120.02526 * 180.29633 * 6 5 4 34 34 H 1.09004 * 109.46976 * 300.00023 * 9 8 7 35 35 H 1.08995 * 109.46729 * 59.99771 * 9 8 7 36 36 H 0.97005 * 119.99791 * 0.02562 * 12 10 9 37 37 H 1.09003 * 113.61400 * 203.66946 * 15 13 12 38 38 H 1.09001 * 113.61768 * 334.49016 * 15 13 12 39 39 H 1.08006 * 119.97497 * 359.97438 * 19 18 16 40 40 H 1.07995 * 119.99042 * 179.97438 * 20 19 18 41 41 H 1.08000 * 120.00701 * 179.97438 * 21 20 19 42 42 H 1.08005 * 120.01138 * 0.02562 * 24 18 16 43 43 H 1.08996 * 113.61417 * 25.42878 * 25 13 12 44 44 H 1.08997 * 113.61644 * 156.34222 * 25 13 12 45 45 H 1.08003 * 120.02575 * 180.02562 * 26 7 6 46 46 H 1.07999 * 119.97076 * 180.02562 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.7216 -0.0357 -2.1426 6 6 3.1881 -0.6863 -3.2684 7 6 2.8541 -2.0147 -3.4889 8 8 3.3071 -2.6553 -4.5985 9 6 4.1237 -1.9001 -5.4957 10 6 4.5281 -2.7688 -6.6588 11 8 4.1543 -3.9212 -6.7138 12 7 5.3060 -2.2652 -7.6375 13 6 5.6997 -3.1098 -8.7679 14 1 4.9983 -3.9234 -8.9528 15 6 6.0680 -2.3149 -10.0318 16 6 7.5074 -2.2750 -9.4919 17 1 7.7092 -1.4176 -8.8497 18 6 8.5568 -2.4693 -10.5557 19 6 9.4977 -1.4832 -10.7863 20 6 10.4615 -1.6603 -11.7617 21 6 10.4848 -2.8233 -12.5075 22 6 9.5428 -3.8118 -12.2774 23 9 9.5651 -4.9495 -13.0057 24 6 8.5818 -3.6358 -11.2966 25 6 7.1684 -3.5625 -8.7167 26 6 2.0563 -2.6878 -2.5749 27 6 1.5971 -2.0343 -1.4478 28 1 -0.3934 0.4417 0.7649 29 1 1.7923 -0.5138 0.8900 30 1 1.5614 2.4679 -1.2085 31 1 1.5878 2.4586 1.2242 32 1 2.9776 0.9997 -1.9728 33 1 3.8092 -0.1603 -3.9782 34 1 3.5620 -1.0409 -5.8624 35 1 5.0152 -1.5548 -4.9723 36 1 5.6059 -1.3438 -7.5929 37 1 5.9632 -2.8872 -10.9535 38 1 5.5930 -1.3353 -10.0854 39 1 9.4799 -0.5737 -10.2041 40 1 11.1958 -0.8890 -11.9413 41 1 11.2376 -2.9611 -13.2696 42 1 7.8491 -4.4079 -11.1135 43 1 7.5824 -3.5887 -7.7088 44 1 7.3640 -4.4751 -9.2797 45 1 1.7953 -3.7220 -2.7442 46 1 0.9765 -2.5580 -0.7358 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705262_2989410.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:00:14 Heat of formation + Delta-G solvation = -60.613168 kcal Electronic energy + Delta-G solvation = -29521.247336 eV Core-core repulsion = 25065.385791 eV Total energy + Delta-G solvation = -4455.861544 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.141 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -49.82395 -41.81966 -41.27378 -40.25946 -39.13618 -38.51248 -37.28817 -34.73557 -32.50392 -31.99887 -31.78982 -31.55573 -29.63849 -26.91327 -26.50462 -26.05620 -24.16381 -23.75675 -22.85326 -22.34351 -21.77736 -20.41708 -19.50224 -18.74846 -18.54713 -18.16978 -17.48597 -17.35537 -17.30682 -17.10034 -16.78976 -16.75322 -16.53477 -15.90555 -15.77602 -15.54884 -15.37995 -15.27891 -14.90742 -14.76162 -14.43952 -14.26257 -14.11013 -13.98683 -13.93231 -13.71254 -13.52403 -13.41151 -13.06726 -13.01446 -12.56720 -12.48174 -12.20349 -12.13121 -11.91559 -11.86157 -11.72709 -11.36873 -10.95083 -10.51025 -10.25567 -10.01014 -9.96459 -9.67035 -9.18628 -5.00755 0.10635 0.15761 0.30819 0.33165 1.25810 1.37294 1.42215 1.55928 1.92379 2.48818 2.49379 2.63878 3.14836 3.31496 3.32139 3.39760 3.47036 3.53009 3.67629 3.70554 3.76787 3.80430 3.83906 3.87842 3.92659 3.97226 4.04785 4.12455 4.26874 4.31423 4.37093 4.46371 4.47814 4.56089 4.64244 4.67221 4.70533 4.79846 4.84103 4.94412 4.97268 5.01449 5.10434 5.17558 5.25978 5.26747 5.36750 5.47933 5.53990 5.69156 5.85769 6.19145 6.34000 6.42977 7.03444 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.071 4.071 3 Si 0.679 3.321 4 C -0.110 4.110 5 C -0.073 4.073 6 C -0.206 4.206 7 C 0.133 3.867 8 O -0.288 6.288 9 C 0.040 3.960 10 C 0.519 3.481 11 O -0.508 6.508 12 N -0.711 5.711 13 C 0.121 3.879 14 H 0.108 0.892 15 C -0.134 4.134 16 C -0.075 4.075 17 H 0.103 0.897 18 C -0.043 4.043 19 C -0.127 4.127 20 C -0.087 4.087 21 C -0.158 4.158 22 C 0.102 3.898 23 F -0.139 7.139 24 C -0.153 4.153 25 C -0.144 4.144 26 C -0.145 4.145 27 C -0.050 4.050 28 H 0.379 0.621 29 H 0.076 0.924 30 H -0.256 1.256 31 H -0.261 1.261 32 H 0.130 0.870 33 H 0.133 0.867 34 H 0.096 0.904 35 H 0.097 0.903 36 H 0.403 0.597 37 H 0.100 0.900 38 H 0.080 0.920 39 H 0.129 0.871 40 H 0.134 0.866 41 H 0.135 0.865 42 H 0.136 0.864 43 H 0.078 0.922 44 H 0.097 0.903 45 H 0.136 0.864 46 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.245 6.267 1.389 7.696 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.181 4.181 3 Si 0.581 3.419 4 C -0.111 4.111 5 C -0.091 4.091 6 C -0.224 4.224 7 C 0.088 3.912 8 O -0.200 6.200 9 C -0.039 4.039 10 C 0.303 3.697 11 O -0.382 6.382 12 N -0.365 5.365 13 C 0.016 3.984 14 H 0.126 0.874 15 C -0.172 4.172 16 C -0.093 4.093 17 H 0.121 0.879 18 C -0.043 4.043 19 C -0.145 4.145 20 C -0.105 4.105 21 C -0.177 4.177 22 C 0.083 3.917 23 F -0.117 7.117 24 C -0.171 4.171 25 C -0.183 4.183 26 C -0.164 4.164 27 C -0.068 4.068 28 H 0.227 0.773 29 H 0.094 0.906 30 H -0.180 1.180 31 H -0.187 1.187 32 H 0.148 0.852 33 H 0.150 0.850 34 H 0.113 0.887 35 H 0.115 0.885 36 H 0.238 0.762 37 H 0.119 0.881 38 H 0.099 0.901 39 H 0.147 0.853 40 H 0.152 0.848 41 H 0.153 0.847 42 H 0.154 0.846 43 H 0.096 0.904 44 H 0.115 0.885 45 H 0.154 0.846 46 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges 3.795 5.683 0.712 6.871 hybrid contribution -0.732 0.386 0.303 0.881 sum 3.063 6.069 1.015 6.874 Atomic orbital electron populations 1.86592 1.17926 1.80103 1.49761 1.24733 0.84354 1.10746 0.98272 0.95203 0.91674 0.74771 0.80284 1.19171 1.00778 0.94624 0.96498 1.20716 0.96469 0.99010 0.92886 1.21130 1.06391 0.94148 1.00747 1.19055 0.94400 0.91082 0.86686 1.86171 1.64295 1.38564 1.30998 1.22459 0.96504 0.94496 0.90412 1.20050 0.78454 0.88107 0.83058 1.90796 1.53051 1.17571 1.76743 1.45474 1.52564 1.15708 1.22732 1.21861 0.96625 0.94412 0.85508 0.87437 1.23429 0.94519 1.01658 0.97622 1.21698 0.92692 0.99570 0.95342 0.87928 1.19505 0.95832 0.93072 0.95941 1.21141 0.95184 0.99316 0.98862 1.21054 0.98198 0.96633 0.94634 1.21223 0.99821 0.94180 1.02475 1.17715 0.97526 0.83518 0.92941 1.91527 1.96069 1.48267 1.75859 1.21004 0.99878 0.99394 0.96857 1.23636 0.95699 0.97530 1.01425 1.20514 1.00409 1.01306 0.94128 1.20831 0.96445 0.93544 0.95960 0.77277 0.90602 1.18041 1.18669 0.85239 0.84969 0.88664 0.88549 0.76237 0.88114 0.90142 0.85315 0.84843 0.84685 0.84589 0.90363 0.88454 0.84591 0.84885 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.63 12.74 -35.23 -0.45 -1.08 16 2 C -0.07 0.01 2.81 36.00 0.10 0.11 16 3 Si 0.68 -0.81 29.78 -169.99 -5.06 -5.87 16 4 C -0.11 -0.13 5.42 -104.60 -0.57 -0.70 16 5 C -0.07 -0.01 8.66 -39.60 -0.34 -0.35 16 6 C -0.21 0.03 9.04 -39.43 -0.36 -0.32 16 7 C 0.13 0.25 6.69 -39.22 -0.26 -0.01 16 8 O -0.29 -0.76 9.67 -39.34 -0.38 -1.14 16 9 C 0.04 -0.06 5.22 36.00 0.19 0.13 16 10 C 0.52 0.38 7.91 -10.99 -0.09 0.29 16 11 O -0.51 -3.02 16.12 -14.36 -0.23 -3.25 16 12 N -0.71 1.83 5.26 -53.02 -0.28 1.55 16 13 C 0.12 -0.22 4.29 -67.12 -0.29 -0.51 16 14 H 0.11 0.03 7.50 -51.93 -0.39 -0.36 16 15 C -0.13 0.44 7.29 -25.92 -0.19 0.25 16 16 C -0.07 0.24 3.87 -90.81 -0.35 -0.11 16 17 H 0.10 -0.47 8.09 -51.93 -0.42 -0.89 16 18 C -0.04 0.06 5.29 -104.64 -0.55 -0.49 16 19 C -0.13 0.21 9.71 -39.58 -0.38 -0.18 16 20 C -0.09 0.11 10.04 -39.59 -0.40 -0.29 16 21 C -0.16 -0.02 10.03 -39.51 -0.40 -0.41 16 22 C 0.10 0.14 7.30 -39.42 -0.29 -0.15 16 23 F -0.14 -0.41 17.27 2.25 0.04 -0.37 16 24 C -0.15 0.01 8.60 -39.52 -0.34 -0.33 16 25 C -0.14 0.30 7.27 -25.77 -0.19 0.11 16 26 C -0.15 -0.30 9.99 -39.43 -0.39 -0.70 16 27 C -0.05 -0.08 9.60 -39.61 -0.38 -0.46 16 28 H 0.38 -1.06 8.74 45.56 0.40 -0.66 16 29 H 0.08 -0.14 7.96 -51.93 -0.41 -0.55 16 30 H -0.26 -0.49 7.11 56.52 0.40 -0.08 16 31 H -0.26 -0.24 7.11 56.52 0.40 0.16 16 32 H 0.13 -0.26 4.87 -52.49 -0.26 -0.52 16 33 H 0.13 -0.43 6.30 -52.49 -0.33 -0.76 16 34 H 0.10 -0.37 7.66 -51.93 -0.40 -0.77 16 35 H 0.10 -0.41 7.66 -51.93 -0.40 -0.81 16 36 H 0.40 -2.36 8.70 -40.82 -0.36 -2.71 16 37 H 0.10 -0.29 7.73 -51.93 -0.40 -0.70 16 38 H 0.08 -0.33 8.14 -51.93 -0.42 -0.75 16 39 H 0.13 -0.47 8.05 -52.48 -0.42 -0.89 16 40 H 0.13 -0.43 8.06 -52.49 -0.42 -0.86 16 41 H 0.14 -0.15 8.06 -52.49 -0.42 -0.57 16 42 H 0.14 -0.15 6.64 -52.48 -0.35 -0.50 16 43 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 44 H 0.10 -0.18 6.30 -51.93 -0.33 -0.51 16 45 H 0.14 0.21 8.06 -52.48 -0.42 -0.22 16 46 H 0.13 0.08 8.06 -52.49 -0.42 -0.35 16 LS Contribution 388.84 15.07 5.86 5.86 Total: 0.00 -10.46 388.84 -11.78 -22.24 By element: Atomic # 1 Polarization: -8.03 SS G_CDS: -5.80 Total: -13.83 kcal Atomic # 6 Polarization: 1.36 SS G_CDS: -5.48 Total: -4.11 kcal Atomic # 7 Polarization: 1.83 SS G_CDS: -0.28 Total: 1.55 kcal Atomic # 8 Polarization: -4.41 SS G_CDS: -1.06 Total: -5.47 kcal Atomic # 9 Polarization: -0.41 SS G_CDS: 0.04 Total: -0.37 kcal Atomic # 14 Polarization: -0.81 SS G_CDS: -5.06 Total: -5.87 kcal Total LS contribution 5.86 Total: 5.86 kcal Total: -10.46 -11.78 -22.24 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705262_2989410.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -38.375 kcal (2) G-P(sol) polarization free energy of solvation -10.461 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -48.836 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.777 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.238 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.613 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds