Wall clock time and date at job start Tue Mar 9 2021 13:00:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86300 * 109.47190 * 2 1 4 4 C 1.50697 * 109.47590 * 239.99812 * 2 1 3 5 5 C 1.38271 * 119.94391 * 119.72423 * 4 2 1 6 6 C 1.38148 * 120.05274 * 179.72564 * 5 4 2 7 7 C 1.38729 * 119.94505 * 0.52938 * 6 5 4 8 8 O 1.35902 * 120.05599 * 179.72347 * 7 6 5 9 9 C 1.42900 * 117.00000 * 0.02562 * 8 7 6 10 10 C 1.50697 * 109.47073 * 180.02562 * 9 8 7 11 11 O 1.21283 * 120.00090 * 359.97438 * 10 9 8 12 12 N 1.34776 * 119.99927 * 180.02562 * 10 9 8 13 13 C 1.46500 * 120.00065 * 179.97438 * 12 10 9 14 14 H 1.08999 * 112.84696 * 25.34015 * 13 12 10 15 15 C 1.53780 * 113.61213 * 156.52865 * 13 12 10 16 16 C 1.53781 * 87.08127 * 89.12352 * 15 13 12 17 17 H 1.09005 * 113.61134 * 270.80481 * 16 15 13 18 18 C 1.50696 * 113.61770 * 139.97930 * 16 15 13 19 19 C 1.38224 * 119.98720 * 120.00205 * 18 16 15 20 20 C 1.38264 * 120.05371 * 179.97438 * 19 18 16 21 21 C 1.38180 * 120.02145 * 0.02562 * 20 19 18 22 22 C 1.38478 * 119.97738 * 359.97438 * 21 20 19 23 23 F 1.35096 * 120.02442 * 180.02562 * 22 21 20 24 24 C 1.38217 * 119.98815 * 299.72403 * 18 16 15 25 25 C 1.53778 * 113.61962 * 254.14149 * 13 12 10 26 26 C 1.38736 * 119.88859 * 359.74735 * 7 6 5 27 27 C 1.38143 * 119.94242 * 359.97438 * 26 7 6 28 28 H 0.96695 * 114.00385 * 300.00492 * 1 2 3 29 29 H 1.09001 * 109.47255 * 120.00067 * 2 1 3 30 30 H 1.48506 * 110.00048 * 300.00131 * 3 2 1 31 31 H 1.48502 * 109.99996 * 61.31456 * 3 2 1 32 32 H 1.07996 * 119.97091 * 359.97438 * 5 4 2 33 33 H 1.07997 * 120.02526 * 180.29633 * 6 5 4 34 34 H 1.09004 * 109.46976 * 300.00023 * 9 8 7 35 35 H 1.08995 * 109.46729 * 59.99771 * 9 8 7 36 36 H 0.97005 * 119.99791 * 0.02562 * 12 10 9 37 37 H 1.09003 * 113.61400 * 203.66946 * 15 13 12 38 38 H 1.09001 * 113.61768 * 334.49016 * 15 13 12 39 39 H 1.08006 * 119.97497 * 359.97438 * 19 18 16 40 40 H 1.07995 * 119.99042 * 179.97438 * 20 19 18 41 41 H 1.08000 * 120.00701 * 179.97438 * 21 20 19 42 42 H 1.08005 * 120.01138 * 0.02562 * 24 18 16 43 43 H 1.08996 * 113.61417 * 25.42878 * 25 13 12 44 44 H 1.08997 * 113.61644 * 156.34222 * 25 13 12 45 45 H 1.08003 * 120.02575 * 180.02562 * 26 7 6 46 46 H 1.07999 * 119.97076 * 180.02562 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.7216 -0.0357 -2.1426 6 6 3.1881 -0.6863 -3.2684 7 6 2.8541 -2.0147 -3.4889 8 8 3.3071 -2.6553 -4.5985 9 6 4.1237 -1.9001 -5.4957 10 6 4.5281 -2.7688 -6.6588 11 8 4.1543 -3.9212 -6.7138 12 7 5.3060 -2.2652 -7.6375 13 6 5.6997 -3.1098 -8.7679 14 1 4.9983 -3.9234 -8.9528 15 6 6.0680 -2.3149 -10.0318 16 6 7.5074 -2.2750 -9.4919 17 1 7.7092 -1.4176 -8.8497 18 6 8.5568 -2.4693 -10.5557 19 6 9.4977 -1.4832 -10.7863 20 6 10.4615 -1.6603 -11.7617 21 6 10.4848 -2.8233 -12.5075 22 6 9.5428 -3.8118 -12.2774 23 9 9.5651 -4.9495 -13.0057 24 6 8.5818 -3.6358 -11.2966 25 6 7.1684 -3.5625 -8.7167 26 6 2.0563 -2.6878 -2.5749 27 6 1.5971 -2.0343 -1.4478 28 1 -0.3934 0.4417 0.7649 29 1 1.7923 -0.5138 0.8900 30 1 1.5614 2.4679 -1.2085 31 1 1.5878 2.4586 1.2242 32 1 2.9776 0.9997 -1.9728 33 1 3.8092 -0.1603 -3.9782 34 1 3.5620 -1.0409 -5.8624 35 1 5.0152 -1.5548 -4.9723 36 1 5.6059 -1.3438 -7.5929 37 1 5.9632 -2.8872 -10.9535 38 1 5.5930 -1.3353 -10.0854 39 1 9.4799 -0.5737 -10.2041 40 1 11.1958 -0.8890 -11.9413 41 1 11.2376 -2.9611 -13.2696 42 1 7.8491 -4.4079 -11.1135 43 1 7.5824 -3.5887 -7.7088 44 1 7.3640 -4.4751 -9.2797 45 1 1.7953 -3.7220 -2.7442 46 1 0.9765 -2.5580 -0.7358 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705262_2989410.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:00:13 Heat of formation + Delta-G solvation = -59.071263 kcal Electronic energy + Delta-G solvation = -29521.180474 eV Core-core repulsion = 25065.385791 eV Total energy + Delta-G solvation = -4455.794682 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.141 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -49.93214 -41.75792 -41.22393 -40.24797 -39.09338 -38.49915 -37.30075 -34.71364 -32.48871 -31.93644 -31.76724 -31.47145 -29.54847 -26.72445 -26.42178 -25.98108 -24.13744 -23.69442 -22.78289 -22.32521 -21.74715 -20.28529 -19.47137 -18.71237 -18.53932 -18.14164 -17.42386 -17.32332 -17.26535 -17.03159 -16.76108 -16.68882 -16.63771 -15.85047 -15.73250 -15.55119 -15.35952 -15.24733 -14.79405 -14.69709 -14.45531 -14.19527 -14.08756 -13.98235 -13.88844 -13.58427 -13.45561 -13.39802 -12.95698 -12.92618 -12.49040 -12.44949 -12.16484 -11.96745 -11.89187 -11.73599 -11.70574 -11.21925 -11.02774 -10.47023 -10.18288 -10.02583 -9.88190 -9.60697 -9.20499 -4.90767 0.17840 0.23733 0.27917 0.32254 1.33622 1.42542 1.46255 1.63244 1.97773 2.57841 2.58482 2.63308 3.23198 3.41796 3.47533 3.52039 3.63884 3.68601 3.80392 3.82692 3.84103 3.94323 3.99461 4.05842 4.07404 4.12773 4.24685 4.29646 4.30958 4.42901 4.43272 4.46016 4.62201 4.69787 4.75292 4.81892 4.88712 4.94298 4.97917 5.01037 5.11908 5.12772 5.17020 5.19412 5.25618 5.37828 5.48308 5.51620 5.62582 5.70019 5.95095 6.27088 6.47284 6.61060 7.13268 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.561 6.561 2 C -0.086 4.086 3 Si 0.770 3.230 4 C -0.125 4.125 5 C -0.078 4.078 6 C -0.198 4.198 7 C 0.121 3.879 8 O -0.320 6.320 9 C 0.036 3.964 10 C 0.515 3.485 11 O -0.573 6.573 12 N -0.690 5.690 13 C 0.115 3.885 14 H 0.079 0.921 15 C -0.124 4.124 16 C -0.062 4.062 17 H 0.130 0.870 18 C -0.046 4.046 19 C -0.123 4.123 20 C -0.090 4.090 21 C -0.170 4.170 22 C 0.070 3.930 23 F -0.157 7.157 24 C -0.162 4.162 25 C -0.147 4.147 26 C -0.167 4.167 27 C -0.062 4.062 28 H 0.394 0.606 29 H 0.091 0.909 30 H -0.295 1.295 31 H -0.290 1.290 32 H 0.152 0.848 33 H 0.169 0.831 34 H 0.126 0.874 35 H 0.132 0.868 36 H 0.423 0.577 37 H 0.093 0.907 38 H 0.098 0.902 39 H 0.157 0.843 40 H 0.156 0.844 41 H 0.140 0.860 42 H 0.136 0.864 43 H 0.073 0.927 44 H 0.088 0.912 45 H 0.127 0.873 46 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.497 9.567 1.927 11.201 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.371 6.371 2 C -0.194 4.194 3 Si 0.675 3.325 4 C -0.125 4.125 5 C -0.095 4.095 6 C -0.216 4.216 7 C 0.075 3.925 8 O -0.233 6.233 9 C -0.042 4.042 10 C 0.301 3.699 11 O -0.452 6.452 12 N -0.344 5.344 13 C 0.010 3.990 14 H 0.097 0.903 15 C -0.162 4.162 16 C -0.080 4.080 17 H 0.148 0.852 18 C -0.046 4.046 19 C -0.141 4.141 20 C -0.108 4.108 21 C -0.188 4.188 22 C 0.051 3.949 23 F -0.136 7.136 24 C -0.180 4.180 25 C -0.185 4.185 26 C -0.186 4.186 27 C -0.080 4.080 28 H 0.244 0.756 29 H 0.109 0.891 30 H -0.222 1.222 31 H -0.218 1.218 32 H 0.169 0.831 33 H 0.186 0.814 34 H 0.144 0.856 35 H 0.149 0.851 36 H 0.262 0.738 37 H 0.112 0.888 38 H 0.116 0.884 39 H 0.175 0.825 40 H 0.174 0.826 41 H 0.158 0.842 42 H 0.154 0.846 43 H 0.092 0.908 44 H 0.106 0.894 45 H 0.145 0.855 46 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges 5.078 9.011 1.248 10.418 hybrid contribution -1.138 -0.627 0.126 1.306 sum 3.940 8.384 1.374 9.365 Atomic orbital electron populations 1.86548 1.18864 1.80706 1.50979 1.25049 0.83835 1.12118 0.98439 0.94224 0.90118 0.71730 0.76411 1.19462 1.01116 0.94542 0.97387 1.21031 0.95901 0.99958 0.92610 1.21489 1.05858 0.93190 1.01082 1.19182 0.94720 0.92002 0.86552 1.86127 1.65189 1.40322 1.31696 1.22770 0.97912 0.94136 0.89359 1.20588 0.77900 0.87530 0.83853 1.90774 1.55745 1.20398 1.78248 1.45300 1.51163 1.16457 1.21463 1.21821 0.96071 0.94474 0.86657 0.90292 1.23358 0.94430 1.02038 0.96344 1.21730 0.91975 0.99516 0.94762 0.85214 1.19720 0.96388 0.92582 0.95946 1.21514 0.94206 0.99949 0.98445 1.21380 0.98759 0.96439 0.94250 1.21427 0.99762 0.94569 1.03087 1.18076 0.99087 0.83688 0.94058 1.91471 1.96305 1.49318 1.76464 1.21142 0.99707 1.00260 0.96909 1.23613 0.95433 0.98152 1.01311 1.20618 1.01557 1.01348 0.95065 1.20908 0.96927 0.94187 0.96018 0.75603 0.89065 1.22246 1.21784 0.83050 0.81362 0.85602 0.85051 0.73787 0.88806 0.88351 0.82489 0.82623 0.84230 0.84626 0.90781 0.89384 0.85490 0.84909 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.39 12.74 -148.98 -1.90 -3.29 16 2 C -0.09 0.07 2.81 71.23 0.20 0.27 16 3 Si 0.77 -2.68 29.78 68.60 2.04 -0.64 16 4 C -0.12 -0.27 5.42 -19.85 -0.11 -0.38 16 5 C -0.08 0.10 8.66 22.26 0.19 0.29 16 6 C -0.20 0.42 9.04 22.37 0.20 0.62 16 7 C 0.12 0.47 6.69 22.51 0.15 0.62 16 8 O -0.32 -1.83 9.67 -73.41 -0.71 -2.54 16 9 C 0.04 -0.16 5.22 71.24 0.37 0.21 16 10 C 0.51 0.78 7.91 87.66 0.69 1.47 16 11 O -0.57 -8.08 16.12 16.00 0.26 -7.82 16 12 N -0.69 4.31 5.26 -440.04 -2.32 1.99 16 13 C 0.12 -0.39 4.29 45.52 0.20 -0.19 16 14 H 0.08 0.23 7.50 -2.39 -0.02 0.21 16 15 C -0.12 0.94 7.29 31.12 0.23 1.16 16 16 C -0.06 0.50 3.87 -10.92 -0.04 0.45 16 17 H 0.13 -1.70 8.09 -2.38 -0.02 -1.72 16 18 C -0.05 0.17 5.29 -19.87 -0.11 0.07 16 19 C -0.12 0.67 9.71 22.27 0.22 0.89 16 20 C -0.09 0.34 10.04 22.26 0.22 0.56 16 21 C -0.17 -0.11 10.03 22.31 0.22 0.12 16 22 C 0.07 0.29 7.30 22.37 0.16 0.45 16 23 F -0.16 -1.29 17.27 44.97 0.78 -0.51 16 24 C -0.16 -0.12 8.60 22.31 0.19 0.07 16 25 C -0.15 0.57 7.27 31.21 0.23 0.80 16 26 C -0.17 -0.99 9.99 22.37 0.22 -0.77 16 27 C -0.06 -0.28 9.60 22.25 0.21 -0.06 16 28 H 0.39 -2.18 8.74 -74.06 -0.65 -2.83 16 29 H 0.09 -0.39 7.96 -2.39 -0.02 -0.41 16 30 H -0.29 -0.91 7.11 99.48 0.71 -0.20 16 31 H -0.29 -0.35 7.11 99.48 0.71 0.36 16 32 H 0.15 -0.97 4.87 -2.91 -0.01 -0.99 16 33 H 0.17 -1.75 6.30 -2.91 -0.02 -1.77 16 34 H 0.13 -1.35 7.66 -2.38 -0.02 -1.37 16 35 H 0.13 -1.54 7.66 -2.39 -0.02 -1.55 16 36 H 0.42 -6.21 8.70 -92.70 -0.81 -7.01 16 37 H 0.09 -0.53 7.73 -2.39 -0.02 -0.55 16 38 H 0.10 -1.05 8.14 -2.39 -0.02 -1.07 16 39 H 0.16 -1.76 8.05 -2.91 -0.02 -1.79 16 40 H 0.16 -1.35 8.06 -2.91 -0.02 -1.37 16 41 H 0.14 -0.20 8.06 -2.91 -0.02 -0.22 16 42 H 0.14 -0.04 6.64 -2.91 -0.02 -0.06 16 43 H 0.07 -0.21 8.14 -2.39 -0.02 -0.23 16 44 H 0.09 -0.18 6.30 -2.39 -0.02 -0.20 16 45 H 0.13 0.79 8.06 -2.91 -0.02 0.76 16 46 H 0.13 0.40 8.06 -2.91 -0.02 0.38 16 Total: 0.00 -29.22 388.84 1.44 -27.78 By element: Atomic # 1 Polarization: -21.26 SS G_CDS: -0.37 Total: -21.64 kcal Atomic # 6 Polarization: 3.01 SS G_CDS: 3.66 Total: 6.67 kcal Atomic # 7 Polarization: 4.31 SS G_CDS: -2.32 Total: 1.99 kcal Atomic # 8 Polarization: -11.30 SS G_CDS: -2.35 Total: -13.65 kcal Atomic # 9 Polarization: -1.29 SS G_CDS: 0.78 Total: -0.51 kcal Atomic # 14 Polarization: -2.68 SS G_CDS: 2.04 Total: -0.64 kcal Total: -29.22 1.44 -27.78 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705262_2989410.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -31.290 kcal (2) G-P(sol) polarization free energy of solvation -29.220 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -60.510 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.439 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.781 kcal (6) G-S(sol) free energy of system = (1) + (5) -59.071 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds