Wall clock time and date at job start Tue Mar 9 2021 13:00:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86300 * 109.47108 * 2 1 4 4 C 1.50706 * 109.46801 * 119.99597 * 2 1 3 5 5 C 1.38268 * 119.94286 * 65.00555 * 4 2 1 6 6 C 1.38139 * 120.05510 * 180.02562 * 5 4 2 7 7 C 1.38733 * 119.94507 * 359.97438 * 6 5 4 8 8 O 1.35905 * 120.05258 * 179.97438 * 7 6 5 9 9 C 1.42901 * 116.99604 * 180.02562 * 8 7 6 10 10 C 1.50694 * 109.46937 * 180.02562 * 9 8 7 11 11 C 1.36419 * 125.80201 * 90.00313 * 10 9 8 12 12 C 1.47385 * 127.19124 * 359.95146 * 11 10 9 13 13 O 1.21614 * 119.99751 * 0.02562 * 12 11 10 14 14 N 1.34769 * 119.99833 * 180.02562 * 12 11 10 15 15 C 1.46506 * 120.00238 * 180.02562 * 14 12 11 16 16 H 1.09000 * 112.84313 * 336.20105 * 15 14 12 17 17 C 1.53781 * 113.61459 * 107.49988 * 15 14 12 18 18 C 1.53780 * 87.07784 * 89.12301 * 17 15 14 19 19 H 1.09003 * 113.69143 * 270.87474 * 18 17 15 20 20 C 1.50697 * 113.61548 * 139.98229 * 18 17 15 21 21 C 1.38218 * 119.98673 * 322.22867 * 20 18 17 22 22 C 1.38269 * 120.05298 * 179.72570 * 21 20 18 23 23 C 1.38177 * 120.02161 * 0.54929 * 22 21 20 24 24 C 1.38477 * 119.97865 * 359.72366 * 23 22 21 25 25 F 1.35101 * 120.03134 * 179.97438 * 24 23 22 26 26 C 1.38220 * 119.98797 * 142.50145 * 20 18 17 27 27 C 1.53774 * 113.61980 * 205.00427 * 15 14 12 28 28 C 1.47025 * 105.61813 * 179.97438 * 11 10 9 29 29 C 1.34181 * 105.94890 * 359.97438 * 28 11 10 30 30 O 1.33657 * 125.80359 * 269.69021 * 10 9 8 31 31 C 1.38723 * 119.88799 * 0.25807 * 7 6 5 32 32 C 1.38145 * 119.94323 * 359.49123 * 31 7 6 33 33 H 0.96705 * 113.99345 * 60.00177 * 1 2 3 34 34 H 1.08992 * 109.47551 * 239.99632 * 2 1 3 35 35 H 1.48497 * 110.00016 * 298.67604 * 3 2 1 36 36 H 1.48495 * 110.00210 * 59.99904 * 3 2 1 37 37 H 1.08008 * 119.97007 * 359.97438 * 5 4 2 38 38 H 1.08001 * 120.02451 * 179.97438 * 6 5 4 39 39 H 1.08999 * 109.47144 * 300.00205 * 9 8 7 40 40 H 1.08998 * 109.47043 * 59.99803 * 9 8 7 41 41 H 0.97005 * 120.00273 * 0.02562 * 14 12 11 42 42 H 1.08996 * 113.61925 * 203.66676 * 17 15 14 43 43 H 1.09004 * 113.61572 * 334.57842 * 17 15 14 44 44 H 1.07999 * 119.97417 * 0.02562 * 21 20 18 45 45 H 1.07999 * 119.98887 * 180.27356 * 22 21 20 46 46 H 1.08006 * 120.00812 * 179.75035 * 23 22 21 47 47 H 1.08005 * 120.01493 * 0.02562 * 26 20 18 48 48 H 1.09001 * 113.61415 * 25.42846 * 27 15 14 49 49 H 1.09001 * 113.61443 * 156.33553 * 27 15 14 50 50 H 1.07997 * 127.02325 * 180.02562 * 28 11 10 51 51 H 1.07999 * 125.43161 * 180.02562 * 29 28 11 52 52 H 1.08001 * 120.02769 * 179.72249 * 31 7 6 53 53 H 1.08006 * 119.97076 * 180.25587 * 32 31 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2306 5 6 1.6840 -2.0605 1.3973 6 6 2.1428 -2.7138 2.5247 7 6 2.8528 -2.0143 3.4897 8 8 3.3048 -2.6547 4.5999 9 6 4.0278 -1.8713 5.5515 10 6 4.4466 -2.7443 6.7062 11 6 5.6141 -3.4444 6.7950 12 6 6.6985 -3.4983 5.7984 13 8 6.6027 -2.8709 4.7610 14 7 7.7963 -4.2428 6.0367 15 6 8.8746 -4.2960 5.0464 16 1 8.5343 -4.0630 4.0374 17 6 10.1360 -3.5234 5.4669 18 6 10.6138 -4.8233 6.1353 19 1 10.2879 -4.9291 7.1701 20 6 12.0863 -5.0886 5.9556 21 6 12.7027 -4.7796 4.7577 22 6 14.0549 -5.0172 4.5932 23 6 14.7891 -5.5744 5.6226 24 6 14.1715 -5.8897 6.8212 25 9 14.8883 -6.4351 7.8282 26 6 12.8188 -5.6460 6.9867 27 6 9.7252 -5.5744 5.1297 28 6 5.5642 -4.1344 8.0924 29 6 4.3933 -3.7887 8.6490 30 8 3.7399 -2.9597 7.8201 31 6 3.0954 -0.6587 3.3223 32 6 2.6389 -0.0111 2.1907 33 1 -0.3932 0.4417 -0.7651 34 1 1.7924 -0.5138 -0.8899 35 1 1.5880 2.4585 -1.2243 36 1 1.5615 2.4679 1.2084 37 1 1.1309 -2.6046 0.6459 38 1 1.9490 -3.7683 2.6546 39 1 4.9130 -1.4485 5.0765 40 1 3.3916 -1.0653 5.9170 41 1 7.8726 -4.7436 6.8640 42 1 10.7566 -3.2105 4.6273 43 1 9.9387 -2.7164 6.1727 44 1 12.1288 -4.3477 3.9511 45 1 14.5364 -4.7713 3.6583 46 1 15.8445 -5.7637 5.4924 47 1 12.3359 -5.8919 7.9210 48 1 9.1964 -6.4232 5.5633 49 1 10.2336 -5.8221 4.1979 50 1 6.3167 -4.7856 8.5119 51 1 4.0355 -4.1214 9.6122 52 1 3.6439 -0.1109 4.0743 53 1 2.8311 1.0434 2.0580 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705262_4549634.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:00:39 Heat of formation + Delta-G solvation = -38.244446 kcal Electronic energy + Delta-G solvation = -38809.805765 eV Core-core repulsion = 33496.015969 eV Total energy + Delta-G solvation = -5313.789796 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 424.156 amu Computer time = 1.79 seconds Orbital eigenvalues (eV) -49.91945 -43.71780 -41.52828 -41.27953 -40.17523 -39.17668 -38.61245 -37.37868 -34.81594 -33.87667 -32.88330 -32.04882 -31.99924 -31.48230 -31.18947 -28.02702 -26.68473 -26.52779 -26.08300 -24.68155 -23.82519 -23.72382 -22.85853 -22.29803 -22.08641 -21.05439 -20.13849 -19.49924 -19.19706 -18.54068 -18.38868 -17.64248 -17.36689 -17.23757 -17.09172 -17.02990 -16.90221 -16.78648 -16.62486 -16.60756 -15.98372 -15.91571 -15.69240 -15.57646 -15.40287 -15.09106 -14.73863 -14.53367 -14.49347 -14.30209 -14.13899 -14.02342 -13.91437 -13.83301 -13.76706 -13.52202 -13.47049 -13.08634 -12.97045 -12.78441 -12.69830 -12.50138 -12.22979 -11.89777 -11.77007 -11.73717 -11.68790 -11.26697 -11.14436 -10.96019 -10.46962 -10.14169 -10.05629 -9.89305 -9.82530 -9.59533 -9.24440 -4.92200 -0.03518 0.16896 0.25076 0.25526 0.29260 1.03696 1.30937 1.51823 1.59222 1.93739 2.03593 2.12596 2.46899 2.58299 2.59918 3.23951 3.33754 3.43527 3.44931 3.59814 3.66822 3.67873 3.71449 3.75787 3.81387 3.88685 3.92733 3.96149 3.98283 4.10830 4.11954 4.16553 4.26855 4.27691 4.39895 4.43555 4.44873 4.46186 4.55863 4.66841 4.69775 4.79418 4.80716 4.86264 4.91096 4.94303 4.94434 5.03565 5.11944 5.13975 5.15318 5.19537 5.23917 5.27230 5.39238 5.47822 5.49203 5.64541 5.67075 5.89248 5.94691 6.24929 6.45282 6.61171 7.12126 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.559 6.559 2 C -0.080 4.080 3 Si 0.759 3.241 4 C -0.123 4.123 5 C -0.058 4.058 6 C -0.162 4.162 7 C 0.124 3.876 8 O -0.321 6.321 9 C 0.134 3.866 10 C 0.040 3.960 11 C -0.222 4.222 12 C 0.587 3.413 13 O -0.567 6.567 14 N -0.691 5.691 15 C 0.115 3.885 16 H 0.091 0.909 17 C -0.139 4.139 18 C -0.068 4.068 19 H 0.111 0.889 20 C -0.044 4.044 21 C -0.129 4.129 22 C -0.089 4.089 23 C -0.169 4.169 24 C 0.072 3.928 25 F -0.155 7.155 26 C -0.159 4.159 27 C -0.124 4.124 28 C -0.196 4.196 29 C -0.014 4.014 30 O -0.179 6.179 31 C -0.205 4.205 32 C -0.080 4.080 33 H 0.394 0.606 34 H 0.095 0.905 35 H -0.284 1.284 36 H -0.298 1.298 37 H 0.142 0.858 38 H 0.136 0.864 39 H 0.111 0.889 40 H 0.097 0.903 41 H 0.415 0.585 42 H 0.104 0.896 43 H 0.069 0.931 44 H 0.150 0.850 45 H 0.155 0.845 46 H 0.141 0.859 47 H 0.142 0.858 48 H 0.086 0.914 49 H 0.106 0.894 50 H 0.193 0.807 51 H 0.251 0.749 52 H 0.149 0.851 53 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.867 -0.746 0.661 3.035 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.369 6.369 2 C -0.189 4.189 3 Si 0.664 3.336 4 C -0.123 4.123 5 C -0.076 4.076 6 C -0.180 4.180 7 C 0.080 3.920 8 O -0.235 6.235 9 C 0.060 3.940 10 C -0.013 4.013 11 C -0.227 4.227 12 C 0.375 3.625 13 O -0.448 6.448 14 N -0.342 5.342 15 C 0.010 3.990 16 H 0.109 0.891 17 C -0.177 4.177 18 C -0.086 4.086 19 H 0.129 0.871 20 C -0.044 4.044 21 C -0.146 4.146 22 C -0.107 4.107 23 C -0.188 4.188 24 C 0.053 3.947 25 F -0.134 7.134 26 C -0.178 4.178 27 C -0.162 4.162 28 C -0.214 4.214 29 C -0.079 4.079 30 O -0.075 6.075 31 C -0.223 4.223 32 C -0.097 4.097 33 H 0.244 0.756 34 H 0.113 0.887 35 H -0.211 1.211 36 H -0.225 1.225 37 H 0.160 0.840 38 H 0.154 0.846 39 H 0.129 0.871 40 H 0.115 0.885 41 H 0.252 0.748 42 H 0.123 0.877 43 H 0.087 0.913 44 H 0.167 0.833 45 H 0.172 0.828 46 H 0.159 0.841 47 H 0.160 0.840 48 H 0.105 0.895 49 H 0.125 0.875 50 H 0.210 0.790 51 H 0.267 0.733 52 H 0.166 0.834 53 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges 2.434 0.097 0.636 2.517 hybrid contribution -0.638 -0.522 0.446 0.937 sum 1.796 -0.424 1.082 2.139 Atomic orbital electron populations 1.86554 1.18647 1.80662 1.51020 1.24930 0.83932 1.11686 0.98326 0.94157 0.90510 0.72396 0.76495 1.19420 1.01530 0.94425 0.96953 1.20974 0.96411 0.93905 0.96350 1.20629 1.02138 1.01197 0.94059 1.19154 0.94544 0.91640 0.86709 1.86048 1.69084 1.38849 1.29557 1.21155 0.98252 0.90707 0.83914 1.22050 0.90877 1.00378 0.87998 1.21379 0.97137 1.05447 0.98714 1.17378 0.81518 0.78734 0.84833 1.90779 1.80484 1.45679 1.27835 1.45328 1.17369 1.48778 1.22701 1.21889 0.86121 0.98043 0.92930 0.89110 1.23564 0.96256 0.96433 1.01448 1.21636 0.89270 0.97042 1.00688 0.87107 1.19686 0.95676 0.96185 0.92847 1.21404 0.94956 1.00426 0.97846 1.21337 0.94152 0.96269 0.98949 1.21417 1.01992 1.02668 0.92714 1.18070 0.90721 0.99797 0.86130 1.91475 1.78428 1.83759 1.59727 1.21225 0.92066 1.02899 1.01562 1.23400 0.96039 0.96264 1.00518 1.23255 1.00618 1.04498 0.93075 1.24903 0.92805 0.92925 0.97286 1.83795 1.44906 1.53653 1.25124 1.21381 1.06387 0.93426 1.01144 1.20995 0.96281 1.00004 0.92419 0.75551 0.88700 1.21068 1.22547 0.84015 0.84605 0.87127 0.88506 0.74802 0.87746 0.91267 0.83263 0.82774 0.84135 0.83999 0.89537 0.87523 0.79025 0.73344 0.83368 0.83762 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -2.08 12.81 -148.98 -1.91 -3.99 16 2 C -0.08 -0.10 2.79 71.24 0.20 0.10 16 3 Si 0.76 -0.41 29.85 68.60 2.05 1.64 16 4 C -0.12 -0.63 5.39 -19.85 -0.11 -0.73 16 5 C -0.06 -0.34 9.68 22.25 0.22 -0.13 16 6 C -0.16 -1.23 9.99 22.36 0.22 -1.01 16 7 C 0.12 1.07 6.69 22.50 0.15 1.22 16 8 O -0.32 -3.14 10.12 -92.48 -0.94 -4.08 16 9 C 0.13 0.70 4.74 71.23 0.34 1.04 16 10 C 0.04 0.21 7.00 25.26 0.18 0.38 16 11 C -0.22 -0.68 6.31 -18.99 -0.12 -0.80 16 12 C 0.59 2.82 7.81 86.65 0.68 3.50 16 13 O -0.57 -6.62 14.44 -4.08 -0.06 -6.68 16 14 N -0.69 1.61 5.26 -443.35 -2.33 -0.72 16 15 C 0.12 -0.35 4.32 45.51 0.20 -0.15 16 16 H 0.09 0.11 7.46 -2.39 -0.02 0.09 16 17 C -0.14 0.66 7.25 31.12 0.23 0.88 16 18 C -0.07 0.43 3.86 -11.01 -0.04 0.39 16 19 H 0.11 -0.94 8.09 -2.39 -0.02 -0.96 16 20 C -0.04 0.13 5.29 -19.87 -0.11 0.02 16 21 C -0.13 0.49 8.59 22.27 0.19 0.68 16 22 C -0.09 0.25 10.04 22.26 0.22 0.47 16 23 C -0.17 -0.12 10.03 22.31 0.22 0.10 16 24 C 0.07 0.26 7.30 22.38 0.16 0.42 16 25 F -0.16 -1.12 17.27 44.97 0.78 -0.34 16 26 C -0.16 -0.03 9.69 22.31 0.22 0.19 16 27 C -0.12 0.85 7.29 31.12 0.23 1.07 16 28 C -0.20 0.81 10.60 23.65 0.25 1.06 16 29 C -0.01 0.06 12.03 66.89 0.80 0.86 16 30 O -0.18 -0.51 10.52 4.48 0.05 -0.47 16 31 C -0.20 -1.09 9.04 22.36 0.20 -0.89 16 32 C -0.08 -0.34 8.66 22.25 0.19 -0.15 16 33 H 0.39 -1.80 8.74 -74.05 -0.65 -2.44 16 34 H 0.10 -0.27 7.96 -2.39 -0.02 -0.29 16 35 H -0.28 -0.87 7.11 99.48 0.71 -0.16 16 36 H -0.30 -1.91 7.05 99.48 0.70 -1.21 16 37 H 0.14 0.40 8.06 -2.91 -0.02 0.37 16 38 H 0.14 0.78 8.06 -2.91 -0.02 0.76 16 39 H 0.11 0.64 6.02 -2.39 -0.01 0.62 16 40 H 0.10 0.11 7.65 -2.39 -0.02 0.09 16 41 H 0.41 -3.30 7.87 -92.70 -0.73 -4.03 16 42 H 0.10 -0.62 6.32 -2.39 -0.02 -0.64 16 43 H 0.07 -0.19 8.14 -2.38 -0.02 -0.21 16 44 H 0.15 -1.17 6.67 -2.91 -0.02 -1.19 16 45 H 0.15 -1.15 8.06 -2.91 -0.02 -1.17 16 46 H 0.14 -0.20 8.06 -2.91 -0.02 -0.23 16 47 H 0.14 -0.35 8.05 -2.91 -0.02 -0.38 16 48 H 0.09 -0.67 8.14 -2.39 -0.02 -0.69 16 49 H 0.11 -0.79 7.71 -2.39 -0.02 -0.81 16 50 H 0.19 -2.21 7.74 -2.91 -0.02 -2.24 16 51 H 0.25 -3.30 8.06 -2.91 -0.02 -3.33 16 52 H 0.15 0.14 6.30 -2.91 -0.02 0.12 16 53 H 0.15 0.02 4.86 -2.91 -0.01 0.01 16 Total: 0.00 -26.01 446.85 2.01 -24.00 By element: Atomic # 1 Polarization: -17.55 SS G_CDS: -0.35 Total: -17.90 kcal Atomic # 6 Polarization: 3.82 SS G_CDS: 4.72 Total: 8.54 kcal Atomic # 7 Polarization: 1.61 SS G_CDS: -2.33 Total: -0.72 kcal Atomic # 8 Polarization: -12.36 SS G_CDS: -2.86 Total: -15.21 kcal Atomic # 9 Polarization: -1.12 SS G_CDS: 0.78 Total: -0.34 kcal Atomic # 14 Polarization: -0.41 SS G_CDS: 2.05 Total: 1.64 kcal Total: -26.01 2.01 -24.00 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705262_4549634.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -14.248 kcal (2) G-P(sol) polarization free energy of solvation -26.010 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -40.259 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.014 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.996 kcal (6) G-S(sol) free energy of system = (1) + (5) -38.244 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.79 seconds