Wall clock time and date at job start Tue Mar 9 2021 13:00:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86305 * 109.46843 * 2 1 4 4 C 1.50697 * 109.47435 * 239.99587 * 2 1 3 5 5 C 1.38237 * 119.94498 * 300.00437 * 4 2 1 6 6 C 1.38168 * 120.05874 * 179.97438 * 5 4 2 7 7 N 1.48002 * 120.03062 * 179.97438 * 6 5 4 8 8 O 1.21799 * 119.99905 * 0.02562 * 7 6 5 9 9 O 1.21796 * 119.99692 * 180.02562 * 7 6 5 10 10 C 1.38720 * 119.93757 * 0.02562 * 6 5 4 11 11 O 1.35902 * 120.04843 * 179.97438 * 10 6 5 12 12 C 1.42902 * 116.99410 * 180.02562 * 11 10 6 13 13 C 1.50698 * 109.46776 * 180.02562 * 12 11 10 14 14 O 1.21278 * 120.00591 * 359.97438 * 13 12 11 15 15 N 1.34786 * 120.00122 * 180.02562 * 13 12 11 16 16 C 1.46492 * 120.00073 * 179.97438 * 15 13 12 17 17 H 1.09000 * 112.85164 * 23.80673 * 16 15 13 18 18 C 1.53782 * 113.61228 * 154.99616 * 16 15 13 19 19 C 1.53782 * 87.08124 * 89.11720 * 18 16 15 20 20 H 1.09001 * 113.61454 * 270.88484 * 19 18 16 21 21 C 1.50703 * 113.61790 * 140.06155 * 19 18 16 22 22 C 1.38224 * 119.98593 * 119.99707 * 21 19 18 23 23 C 1.38259 * 120.05257 * 179.97438 * 22 21 19 24 24 C 1.38176 * 120.02531 * 0.02562 * 23 22 21 25 25 C 1.38478 * 119.97563 * 0.02562 * 24 23 22 26 26 F 1.35098 * 120.02823 * 179.97438 * 25 24 23 27 27 C 1.38214 * 119.98731 * 299.72992 * 21 19 18 28 28 C 1.53776 * 113.61464 * 252.49524 * 16 15 13 29 29 C 1.38750 * 119.89138 * 359.97438 * 10 6 5 30 30 C 1.38125 * 119.94353 * 0.28283 * 29 10 6 31 31 H 0.96702 * 114.00329 * 300.00016 * 1 2 3 32 32 H 1.08999 * 109.47085 * 119.99250 * 2 1 3 33 33 H 1.48504 * 109.99804 * 299.99551 * 3 2 1 34 34 H 1.48493 * 110.00096 * 61.31652 * 3 2 1 35 35 H 1.08006 * 119.97221 * 0.02562 * 5 4 2 36 36 H 1.08998 * 109.47006 * 299.99811 * 12 11 10 37 37 H 1.08995 * 109.47328 * 59.99911 * 12 11 10 38 38 H 0.97003 * 119.99577 * 359.97438 * 15 13 12 39 39 H 1.09006 * 113.61635 * 203.66177 * 18 16 15 40 40 H 1.09000 * 113.61699 * 334.48766 * 18 16 15 41 41 H 1.08009 * 119.97220 * 0.02562 * 22 21 19 42 42 H 1.08001 * 119.98747 * 180.02562 * 23 22 21 43 43 H 1.08005 * 120.01457 * 180.02562 * 24 23 22 44 44 H 1.08001 * 120.01555 * 0.02562 * 27 21 19 45 45 H 1.09002 * 113.61674 * 25.43454 * 28 16 15 46 46 H 1.09002 * 113.61489 * 156.34122 * 28 16 15 47 47 H 1.08002 * 120.02434 * 179.97438 * 29 10 6 48 48 H 1.08004 * 119.96925 * 179.69882 * 30 29 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 1.5967 -2.0339 -1.4480 6 6 2.0556 -2.6875 -2.5755 7 7 1.6974 -4.1046 -2.8076 8 8 0.9973 -4.6951 -2.0046 9 8 2.1026 -4.6802 -3.8015 10 6 2.8533 -2.0144 -3.4893 11 8 3.3063 -2.6552 -4.5988 12 6 4.1234 -1.9001 -5.4957 13 6 4.5278 -2.7688 -6.6589 14 8 4.1536 -3.9211 -6.7141 15 7 5.3062 -2.2655 -7.6374 16 6 5.6997 -3.1101 -8.7677 17 1 5.0123 -3.9390 -8.9363 18 6 6.0327 -2.3171 -10.0426 19 6 7.4789 -2.2440 -9.5249 20 1 7.6725 -1.3788 -8.8908 21 6 8.5161 -2.4228 -10.6036 22 6 9.4324 -1.4187 -10.8541 23 6 10.3848 -1.5815 -11.8430 24 6 10.4213 -2.7482 -12.5825 25 6 9.5031 -3.7543 -12.3332 26 9 9.5375 -4.8952 -13.0559 27 6 8.5541 -3.5929 -11.3383 28 6 7.1787 -3.5302 -8.7372 29 6 3.1878 -0.6860 -3.2686 30 6 2.7308 -0.0388 -2.1371 31 1 -0.3934 0.4417 0.7650 32 1 1.7923 -0.5137 0.8900 33 1 1.5614 2.4679 -1.2086 34 1 1.5878 2.4586 1.2241 35 1 0.9753 -2.5574 -0.7364 36 1 3.5621 -1.0408 -5.8624 37 1 5.0149 -1.5552 -4.9721 38 1 5.6057 -1.3439 -7.5930 39 1 5.9257 -2.8981 -10.9587 40 1 5.5371 -1.3478 -10.0958 41 1 9.4049 -0.5066 -10.2763 42 1 11.1006 -0.7965 -12.0376 43 1 11.1656 -2.8753 -13.3547 44 1 7.8404 -4.3789 -11.1397 45 1 7.6094 -3.5397 -7.7359 46 1 7.3850 -4.4428 -9.2964 47 1 3.8090 -0.1601 -3.9784 48 1 2.9950 0.9937 -1.9625 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705262_4549638.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:00:50 Heat of formation + Delta-G solvation = -53.138066 kcal Electronic energy + Delta-G solvation = -36251.802320 eV Core-core repulsion = 30965.248485 eV Total energy + Delta-G solvation = -5286.553835 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 403.136 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -49.82626 -42.99634 -41.90438 -41.47603 -40.41551 -39.51176 -38.64072 -37.67842 -37.10337 -34.77644 -33.51888 -32.49169 -32.06045 -31.56754 -29.97235 -27.57371 -26.92256 -26.81309 -26.28881 -24.26055 -23.76830 -22.88247 -22.66427 -22.02238 -20.51034 -20.32388 -19.45516 -19.07343 -18.85450 -18.75882 -18.30687 -18.27193 -17.66181 -17.47504 -17.35165 -17.11038 -16.97916 -16.63880 -16.53889 -16.15356 -15.95286 -15.74684 -15.54072 -15.45628 -14.98023 -14.87712 -14.50980 -14.39556 -14.23153 -14.01689 -13.93907 -13.85924 -13.65582 -13.21962 -13.08838 -13.05610 -12.87401 -12.56920 -12.49426 -12.17785 -12.14642 -12.08564 -11.87422 -11.79135 -11.71332 -11.38240 -11.01285 -10.90392 -10.81598 -10.28142 -9.97384 -9.86740 -9.67933 -5.25201 -1.09924 -0.34723 0.09718 0.14934 0.40852 0.55654 0.97797 1.05978 1.33578 1.36664 1.69941 1.94157 2.15192 2.47929 2.87448 3.04594 3.09537 3.14087 3.30814 3.36480 3.41812 3.44880 3.49934 3.54888 3.56225 3.62585 3.68239 3.74459 3.77714 3.96357 4.03281 4.05192 4.11148 4.17339 4.29763 4.30587 4.45099 4.45788 4.55446 4.64157 4.68841 4.73199 4.78817 4.82699 4.92724 4.94600 5.00472 5.09754 5.24376 5.33820 5.44306 5.47964 5.72592 5.84927 6.18051 6.20178 6.96475 6.99352 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.074 4.074 3 Si 0.684 3.316 4 C -0.110 4.110 5 C 0.010 3.990 6 C -0.075 4.075 7 N 0.029 4.971 8 O -0.178 6.178 9 O -0.118 6.118 10 C 0.199 3.801 11 O -0.254 6.254 12 C 0.031 3.969 13 C 0.516 3.484 14 O -0.492 6.492 15 N -0.711 5.711 16 C 0.121 3.879 17 H 0.110 0.890 18 C -0.134 4.134 19 C -0.075 4.075 20 H 0.102 0.898 21 C -0.044 4.044 22 C -0.127 4.127 23 C -0.087 4.087 24 C -0.158 4.158 25 C 0.103 3.897 26 F -0.138 7.138 27 C -0.152 4.152 28 C -0.144 4.144 29 C -0.208 4.208 30 C -0.022 4.022 31 H 0.386 0.614 32 H 0.085 0.915 33 H -0.251 1.251 34 H -0.255 1.255 35 H 0.163 0.837 36 H 0.102 0.898 37 H 0.103 0.897 38 H 0.402 0.598 39 H 0.101 0.899 40 H 0.079 0.921 41 H 0.129 0.871 42 H 0.134 0.866 43 H 0.135 0.865 44 H 0.137 0.863 45 H 0.078 0.922 46 H 0.098 0.902 47 H 0.158 0.842 48 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.940 11.749 1.702 13.275 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.183 4.183 3 Si 0.584 3.416 4 C -0.111 4.111 5 C -0.009 4.009 6 C -0.160 4.160 7 N 0.549 4.451 8 O -0.387 6.387 9 O -0.342 6.342 10 C 0.150 3.850 11 O -0.163 6.163 12 C -0.048 4.048 13 C 0.300 3.700 14 O -0.364 6.364 15 N -0.365 5.365 16 C 0.016 3.984 17 H 0.128 0.872 18 C -0.172 4.172 19 C -0.093 4.093 20 H 0.120 0.880 21 C -0.044 4.044 22 C -0.145 4.145 23 C -0.105 4.105 24 C -0.177 4.177 25 C 0.083 3.917 26 F -0.117 7.117 27 C -0.171 4.171 28 C -0.183 4.183 29 C -0.228 4.228 30 C -0.040 4.040 31 H 0.234 0.766 32 H 0.103 0.897 33 H -0.176 1.176 34 H -0.179 1.179 35 H 0.181 0.819 36 H 0.120 0.880 37 H 0.121 0.879 38 H 0.237 0.763 39 H 0.119 0.881 40 H 0.098 0.902 41 H 0.147 0.853 42 H 0.151 0.849 43 H 0.153 0.847 44 H 0.154 0.846 45 H 0.096 0.904 46 H 0.116 0.884 47 H 0.175 0.825 48 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges 5.623 11.819 1.186 13.142 hybrid contribution -0.851 0.024 0.304 0.904 sum 4.772 11.843 1.490 12.855 Atomic orbital electron populations 1.86584 1.17276 1.80292 1.50147 1.24769 0.85008 1.11164 0.97387 0.95270 0.91221 0.73959 0.81167 1.19141 1.01101 0.93061 0.97788 1.20799 0.93182 0.93658 0.93227 1.20553 1.10615 0.84045 1.00758 1.43322 0.99160 1.02267 1.00333 1.94552 1.35318 1.66698 1.42090 1.94694 1.54678 1.67575 1.17219 1.18672 0.90004 0.90793 0.85568 1.86502 1.62836 1.37461 1.29472 1.22717 0.96424 0.94880 0.90743 1.19826 0.79009 0.88174 0.83016 1.90874 1.52215 1.17075 1.76190 1.45439 1.52629 1.15678 1.22763 1.21874 0.96626 0.94550 0.85313 0.87203 1.23441 0.94552 1.01622 0.97630 1.21650 0.92846 0.99595 0.95215 0.87993 1.19501 0.95909 0.93003 0.95957 1.21132 0.95448 0.99200 0.98750 1.21050 0.98124 0.96710 0.94650 1.21224 1.00034 0.93956 1.02480 1.17720 0.97681 0.83343 0.92924 1.91529 1.95953 1.48029 1.76184 1.21010 0.99972 0.99414 0.96719 1.23592 0.95728 0.97625 1.01331 1.21232 1.07317 0.92645 1.01559 1.21189 0.92083 0.99730 0.90985 0.76554 0.89722 1.17561 1.17923 0.81943 0.88000 0.87886 0.76338 0.88089 0.90185 0.85347 0.84858 0.84683 0.84554 0.90367 0.88395 0.82495 0.83322 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.44 12.74 -35.23 -0.45 -0.01 16 2 C -0.07 0.19 2.81 36.00 0.10 0.29 16 3 Si 0.68 -2.61 29.78 -169.99 -5.06 -7.68 16 4 C -0.11 0.13 5.42 -104.60 -0.57 -0.43 16 5 C 0.01 0.01 9.11 -39.61 -0.36 -0.35 16 6 C -0.08 -0.24 6.87 -79.80 -0.55 -0.78 16 7 N 0.03 0.20 4.45 34.03 0.15 0.35 16 8 O -0.18 -1.33 18.45 -29.46 -0.54 -1.87 16 9 O -0.12 -1.02 17.24 -36.49 -0.63 -1.65 16 10 C 0.20 0.17 6.67 -39.21 -0.26 -0.09 16 11 O -0.25 -0.52 7.68 -49.79 -0.38 -0.91 16 12 C 0.03 -0.09 5.22 36.00 0.19 0.10 16 13 C 0.52 0.01 7.91 -10.98 -0.09 -0.08 16 14 O -0.49 -2.84 16.10 -14.35 -0.23 -3.07 16 15 N -0.71 2.36 5.26 -53.02 -0.28 2.08 16 16 C 0.12 -0.27 4.32 -67.12 -0.29 -0.56 16 17 H 0.11 0.00 7.46 -51.93 -0.39 -0.38 16 18 C -0.13 0.49 7.29 -25.92 -0.19 0.30 16 19 C -0.07 0.27 3.85 -90.95 -0.35 -0.08 16 20 H 0.10 -0.52 8.09 -51.93 -0.42 -0.95 16 21 C -0.04 0.07 5.29 -104.63 -0.55 -0.48 16 22 C -0.13 0.24 9.71 -39.58 -0.38 -0.14 16 23 C -0.09 0.12 10.04 -39.60 -0.40 -0.27 16 24 C -0.16 0.01 10.03 -39.52 -0.40 -0.39 16 25 C 0.10 0.12 7.30 -39.42 -0.29 -0.16 16 26 F -0.14 -0.40 17.27 2.25 0.04 -0.36 16 27 C -0.15 0.04 8.61 -39.51 -0.34 -0.30 16 28 C -0.14 0.35 7.25 -25.92 -0.19 0.16 16 29 C -0.21 0.65 9.04 -39.43 -0.36 0.29 16 30 C -0.02 0.07 8.66 -39.60 -0.34 -0.27 16 31 H 0.39 -1.81 8.74 45.56 0.40 -1.41 16 32 H 0.08 -0.36 7.96 -51.93 -0.41 -0.77 16 33 H -0.25 0.26 7.11 56.52 0.40 0.66 16 34 H -0.25 0.33 7.11 56.52 0.40 0.74 16 35 H 0.16 0.16 7.61 -52.48 -0.40 -0.24 16 36 H 0.10 -0.62 7.66 -51.93 -0.40 -1.02 16 37 H 0.10 -0.66 7.66 -51.93 -0.40 -1.06 16 38 H 0.40 -2.75 8.70 -40.82 -0.36 -3.10 16 39 H 0.10 -0.32 7.73 -51.93 -0.40 -0.72 16 40 H 0.08 -0.36 8.14 -51.93 -0.42 -0.78 16 41 H 0.13 -0.51 8.05 -52.48 -0.42 -0.93 16 42 H 0.13 -0.46 8.06 -52.49 -0.42 -0.88 16 43 H 0.14 -0.17 8.06 -52.48 -0.42 -0.59 16 44 H 0.14 -0.17 6.65 -52.49 -0.35 -0.52 16 45 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 46 H 0.10 -0.20 6.31 -51.93 -0.33 -0.53 16 47 H 0.16 -1.11 6.30 -52.49 -0.33 -1.44 16 48 H 0.15 -0.90 4.88 -52.48 -0.26 -1.16 16 LS Contribution 414.81 15.07 6.25 6.25 Total: 0.00 -13.68 414.81 -12.10 -25.77 By element: Atomic # 1 Polarization: -10.29 SS G_CDS: -5.35 Total: -15.64 kcal Atomic # 6 Polarization: 2.35 SS G_CDS: -5.61 Total: -3.26 kcal Atomic # 7 Polarization: 2.56 SS G_CDS: -0.13 Total: 2.43 kcal Atomic # 8 Polarization: -5.28 SS G_CDS: -2.24 Total: -7.52 kcal Atomic # 9 Polarization: -0.40 SS G_CDS: 0.04 Total: -0.36 kcal Atomic # 14 Polarization: -2.61 SS G_CDS: -5.06 Total: -7.68 kcal Total LS contribution 6.25 Total: 6.25 kcal Total: -13.68 -12.10 -25.77 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705262_4549638.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -27.366 kcal (2) G-P(sol) polarization free energy of solvation -13.676 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -41.042 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.096 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.772 kcal (6) G-S(sol) free energy of system = (1) + (5) -53.138 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.21 seconds