Wall clock time and date at job start Tue Mar 9 2021 13:00:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86305 * 109.46843 * 2 1 4 4 C 1.50697 * 109.47435 * 239.99587 * 2 1 3 5 5 C 1.38237 * 119.94498 * 300.00437 * 4 2 1 6 6 C 1.38168 * 120.05874 * 179.97438 * 5 4 2 7 7 N 1.48002 * 120.03062 * 179.97438 * 6 5 4 8 8 O 1.21799 * 119.99905 * 0.02562 * 7 6 5 9 9 O 1.21796 * 119.99692 * 180.02562 * 7 6 5 10 10 C 1.38720 * 119.93757 * 0.02562 * 6 5 4 11 11 O 1.35902 * 120.04843 * 179.97438 * 10 6 5 12 12 C 1.42902 * 116.99410 * 180.02562 * 11 10 6 13 13 C 1.50698 * 109.46776 * 180.02562 * 12 11 10 14 14 O 1.21278 * 120.00591 * 359.97438 * 13 12 11 15 15 N 1.34786 * 120.00122 * 180.02562 * 13 12 11 16 16 C 1.46492 * 120.00073 * 179.97438 * 15 13 12 17 17 H 1.09000 * 112.85164 * 23.80673 * 16 15 13 18 18 C 1.53782 * 113.61228 * 154.99616 * 16 15 13 19 19 C 1.53782 * 87.08124 * 89.11720 * 18 16 15 20 20 H 1.09001 * 113.61454 * 270.88484 * 19 18 16 21 21 C 1.50703 * 113.61790 * 140.06155 * 19 18 16 22 22 C 1.38224 * 119.98593 * 119.99707 * 21 19 18 23 23 C 1.38259 * 120.05257 * 179.97438 * 22 21 19 24 24 C 1.38176 * 120.02531 * 0.02562 * 23 22 21 25 25 C 1.38478 * 119.97563 * 0.02562 * 24 23 22 26 26 F 1.35098 * 120.02823 * 179.97438 * 25 24 23 27 27 C 1.38214 * 119.98731 * 299.72992 * 21 19 18 28 28 C 1.53776 * 113.61464 * 252.49524 * 16 15 13 29 29 C 1.38750 * 119.89138 * 359.97438 * 10 6 5 30 30 C 1.38125 * 119.94353 * 0.28283 * 29 10 6 31 31 H 0.96702 * 114.00329 * 300.00016 * 1 2 3 32 32 H 1.08999 * 109.47085 * 119.99250 * 2 1 3 33 33 H 1.48504 * 109.99804 * 299.99551 * 3 2 1 34 34 H 1.48493 * 110.00096 * 61.31652 * 3 2 1 35 35 H 1.08006 * 119.97221 * 0.02562 * 5 4 2 36 36 H 1.08998 * 109.47006 * 299.99811 * 12 11 10 37 37 H 1.08995 * 109.47328 * 59.99911 * 12 11 10 38 38 H 0.97003 * 119.99577 * 359.97438 * 15 13 12 39 39 H 1.09006 * 113.61635 * 203.66177 * 18 16 15 40 40 H 1.09000 * 113.61699 * 334.48766 * 18 16 15 41 41 H 1.08009 * 119.97220 * 0.02562 * 22 21 19 42 42 H 1.08001 * 119.98747 * 180.02562 * 23 22 21 43 43 H 1.08005 * 120.01457 * 180.02562 * 24 23 22 44 44 H 1.08001 * 120.01555 * 0.02562 * 27 21 19 45 45 H 1.09002 * 113.61674 * 25.43454 * 28 16 15 46 46 H 1.09002 * 113.61489 * 156.34122 * 28 16 15 47 47 H 1.08002 * 120.02434 * 179.97438 * 29 10 6 48 48 H 1.08004 * 119.96925 * 179.69882 * 30 29 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 1.5967 -2.0339 -1.4480 6 6 2.0556 -2.6875 -2.5755 7 7 1.6974 -4.1046 -2.8076 8 8 0.9973 -4.6951 -2.0046 9 8 2.1026 -4.6802 -3.8015 10 6 2.8533 -2.0144 -3.4893 11 8 3.3063 -2.6552 -4.5988 12 6 4.1234 -1.9001 -5.4957 13 6 4.5278 -2.7688 -6.6589 14 8 4.1536 -3.9211 -6.7141 15 7 5.3062 -2.2655 -7.6374 16 6 5.6997 -3.1101 -8.7677 17 1 5.0123 -3.9390 -8.9363 18 6 6.0327 -2.3171 -10.0426 19 6 7.4789 -2.2440 -9.5249 20 1 7.6725 -1.3788 -8.8908 21 6 8.5161 -2.4228 -10.6036 22 6 9.4324 -1.4187 -10.8541 23 6 10.3848 -1.5815 -11.8430 24 6 10.4213 -2.7482 -12.5825 25 6 9.5031 -3.7543 -12.3332 26 9 9.5375 -4.8952 -13.0559 27 6 8.5541 -3.5929 -11.3383 28 6 7.1787 -3.5302 -8.7372 29 6 3.1878 -0.6860 -3.2686 30 6 2.7308 -0.0388 -2.1371 31 1 -0.3934 0.4417 0.7650 32 1 1.7923 -0.5137 0.8900 33 1 1.5614 2.4679 -1.2086 34 1 1.5878 2.4586 1.2241 35 1 0.9753 -2.5574 -0.7364 36 1 3.5621 -1.0408 -5.8624 37 1 5.0149 -1.5552 -4.9721 38 1 5.6057 -1.3439 -7.5930 39 1 5.9257 -2.8981 -10.9587 40 1 5.5371 -1.3478 -10.0958 41 1 9.4049 -0.5066 -10.2763 42 1 11.1006 -0.7965 -12.0376 43 1 11.1656 -2.8753 -13.3547 44 1 7.8404 -4.3789 -11.1397 45 1 7.6094 -3.5397 -7.7359 46 1 7.3850 -4.4428 -9.2964 47 1 3.8090 -0.1601 -3.9784 48 1 2.9950 0.9937 -1.9625 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705262_4549638.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:00:49 Heat of formation + Delta-G solvation = -54.961745 kcal Electronic energy + Delta-G solvation = -36251.881400 eV Core-core repulsion = 30965.248485 eV Total energy + Delta-G solvation = -5286.632916 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 403.136 amu Computer time = 1.39 seconds Orbital eigenvalues (eV) -49.92846 -43.29007 -41.85802 -41.39616 -40.34362 -39.41159 -38.56420 -37.62587 -37.48470 -34.70623 -33.50473 -32.36038 -31.94299 -31.46642 -29.77708 -27.81656 -26.70709 -26.66522 -26.10618 -24.20847 -23.69382 -22.86349 -22.61815 -21.91130 -20.48077 -20.23850 -19.77755 -19.07419 -18.78133 -18.69179 -18.55521 -18.21001 -17.55565 -17.39592 -17.25765 -17.02888 -16.83213 -16.63552 -16.47168 -15.97003 -15.84760 -15.66854 -15.43523 -15.37336 -14.82417 -14.72989 -14.34545 -14.25418 -14.10732 -13.90560 -13.81508 -13.73682 -13.47324 -13.13814 -12.96384 -12.91435 -12.71080 -12.68743 -12.45639 -12.33795 -12.27213 -12.12150 -11.94696 -11.89582 -11.68427 -11.20688 -11.02954 -10.81726 -10.60887 -10.15895 -9.87445 -9.75576 -9.59887 -4.92260 -1.30304 -0.22574 0.16644 0.18607 0.24431 0.35904 1.20898 1.27027 1.45617 1.64343 1.99086 2.04059 2.31596 2.59150 3.07313 3.22890 3.24330 3.31893 3.49549 3.54539 3.59952 3.65111 3.71144 3.71740 3.83452 3.88304 3.95867 3.97227 4.06124 4.08070 4.25043 4.25740 4.30787 4.33815 4.44102 4.52760 4.63528 4.64695 4.76797 4.83036 4.87149 4.90482 4.95366 5.02557 5.08566 5.13154 5.13921 5.19776 5.20544 5.38845 5.49450 5.64022 5.77611 5.95959 6.42858 6.46885 6.53569 7.18043 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.562 6.562 2 C -0.096 4.096 3 Si 0.788 3.212 4 C -0.112 4.112 5 C -0.005 4.005 6 C -0.105 4.105 7 N 0.035 4.965 8 O -0.204 6.204 9 O -0.172 6.172 10 C 0.194 3.806 11 O -0.292 6.292 12 C 0.024 3.976 13 C 0.510 3.490 14 O -0.566 6.566 15 N -0.688 5.688 16 C 0.116 3.884 17 H 0.076 0.924 18 C -0.124 4.124 19 C -0.060 4.060 20 H 0.133 0.867 21 C -0.046 4.046 22 C -0.122 4.122 23 C -0.091 4.091 24 C -0.170 4.170 25 C 0.069 3.931 26 F -0.157 7.157 27 C -0.162 4.162 28 C -0.147 4.147 29 C -0.187 4.187 30 C -0.006 4.006 31 H 0.399 0.601 32 H 0.099 0.901 33 H -0.279 1.279 34 H -0.292 1.292 35 H 0.150 0.850 36 H 0.144 0.856 37 H 0.150 0.850 38 H 0.425 0.575 39 H 0.091 0.909 40 H 0.099 0.901 41 H 0.160 0.840 42 H 0.156 0.844 43 H 0.139 0.861 44 H 0.134 0.866 45 H 0.075 0.925 46 H 0.085 0.915 47 H 0.211 0.789 48 H 0.188 0.812 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.824 17.318 2.405 19.155 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.373 6.373 2 C -0.202 4.202 3 Si 0.690 3.310 4 C -0.114 4.114 5 C -0.025 4.025 6 C -0.191 4.191 7 N 0.545 4.455 8 O -0.411 6.411 9 O -0.386 6.386 10 C 0.144 3.856 11 O -0.202 6.202 12 C -0.053 4.053 13 C 0.296 3.704 14 O -0.443 6.443 15 N -0.343 5.343 16 C 0.010 3.990 17 H 0.095 0.905 18 C -0.162 4.162 19 C -0.078 4.078 20 H 0.151 0.849 21 C -0.046 4.046 22 C -0.140 4.140 23 C -0.108 4.108 24 C -0.189 4.189 25 C 0.050 3.950 26 F -0.136 7.136 27 C -0.181 4.181 28 C -0.186 4.186 29 C -0.205 4.205 30 C -0.024 4.024 31 H 0.250 0.750 32 H 0.116 0.884 33 H -0.206 1.206 34 H -0.219 1.219 35 H 0.167 0.833 36 H 0.162 0.838 37 H 0.167 0.833 38 H 0.264 0.736 39 H 0.109 0.891 40 H 0.118 0.882 41 H 0.177 0.823 42 H 0.174 0.826 43 H 0.157 0.843 44 H 0.152 0.848 45 H 0.094 0.906 46 H 0.103 0.897 47 H 0.227 0.773 48 H 0.205 0.795 Dipole moment (debyes) X Y Z Total from point charges 7.547 17.370 1.837 19.028 hybrid contribution -1.439 -1.558 0.154 2.126 sum 6.108 15.812 1.991 17.067 Atomic orbital electron populations 1.86544 1.18486 1.81014 1.51281 1.25256 0.84363 1.13175 0.97435 0.94239 0.89209 0.70079 0.77431 1.19468 1.01150 0.91965 0.98784 1.20825 0.93969 0.94884 0.92777 1.20853 1.13530 0.81555 1.03148 1.43878 0.98210 1.03965 0.99456 1.94496 1.36121 1.68342 1.42182 1.94674 1.56298 1.69337 1.18325 1.18942 0.89664 0.92051 0.84933 1.86471 1.63678 1.39752 1.30302 1.23149 0.98350 0.94394 0.89385 1.20548 0.78257 0.87642 0.83981 1.90858 1.55192 1.20377 1.77900 1.45240 1.51231 1.16439 1.21361 1.21797 0.95971 0.94558 0.86690 0.90524 1.23363 0.94632 1.01994 0.96216 1.21688 0.91994 0.99602 0.94535 0.84890 1.19736 0.96472 0.92454 0.95982 1.21520 0.94326 0.99874 0.98267 1.21385 0.98664 0.96496 0.94293 1.21427 0.99973 0.94369 1.03117 1.18095 0.99330 0.83503 0.94084 1.91471 1.96208 1.49144 1.76813 1.21149 0.99795 1.00347 0.96819 1.23566 0.95513 0.98208 1.01290 1.21808 1.06184 0.90431 1.02064 1.21678 0.89889 1.01058 0.89752 0.74973 0.88353 1.20609 1.21948 0.83251 0.83806 0.83274 0.73623 0.89096 0.88206 0.82286 0.82587 0.84293 0.84781 0.90641 0.89674 0.77264 0.79528 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 1.07 12.74 -148.98 -1.90 -0.83 16 2 C -0.10 0.63 2.81 71.24 0.20 0.83 16 3 Si 0.79 -8.27 29.78 68.60 2.04 -6.23 16 4 C -0.11 0.43 5.42 -19.85 -0.11 0.32 16 5 C -0.01 -0.02 9.11 22.25 0.20 0.18 16 6 C -0.11 -0.84 6.87 36.48 0.25 -0.59 16 7 N 0.03 0.61 4.45 -46.24 -0.21 0.41 16 8 O -0.20 -3.96 18.45 18.89 0.35 -3.61 16 9 O -0.17 -3.82 17.24 25.61 0.44 -3.38 16 10 C 0.19 0.18 6.67 22.51 0.15 0.33 16 11 O -0.29 -1.24 7.68 -63.42 -0.49 -1.73 16 12 C 0.02 -0.20 5.22 71.24 0.37 0.17 16 13 C 0.51 -0.05 7.91 87.65 0.69 0.65 16 14 O -0.57 -8.21 16.10 16.01 0.26 -7.95 16 15 N -0.69 5.56 5.26 -440.05 -2.32 3.24 16 16 C 0.12 -0.45 4.32 45.52 0.20 -0.26 16 17 H 0.08 0.25 7.46 -2.39 -0.02 0.23 16 18 C -0.12 1.02 7.29 31.12 0.23 1.25 16 19 C -0.06 0.54 3.85 -11.01 -0.04 0.50 16 20 H 0.13 -1.97 8.09 -2.39 -0.02 -1.99 16 21 C -0.05 0.20 5.29 -19.87 -0.11 0.09 16 22 C -0.12 0.76 9.71 22.27 0.22 0.98 16 23 C -0.09 0.39 10.04 22.26 0.22 0.61 16 24 C -0.17 -0.07 10.03 22.31 0.22 0.15 16 25 C 0.07 0.28 7.30 22.38 0.16 0.45 16 26 F -0.16 -1.33 17.27 44.97 0.78 -0.55 16 27 C -0.16 -0.11 8.61 22.31 0.19 0.09 16 28 C -0.15 0.65 7.25 31.12 0.23 0.88 16 29 C -0.19 1.94 9.04 22.37 0.20 2.15 16 30 C -0.01 0.07 8.66 22.26 0.19 0.26 16 31 H 0.40 -3.82 8.74 -74.06 -0.65 -4.47 16 32 H 0.10 -0.94 7.96 -2.39 -0.02 -0.96 16 33 H -0.28 1.54 7.11 99.48 0.71 2.25 16 34 H -0.29 1.22 7.11 99.48 0.71 1.93 16 35 H 0.15 0.73 7.61 -2.91 -0.02 0.71 16 36 H 0.14 -2.45 7.66 -2.39 -0.02 -2.47 16 37 H 0.15 -2.68 7.66 -2.39 -0.02 -2.70 16 38 H 0.42 -7.43 8.70 -92.71 -0.81 -8.23 16 39 H 0.09 -0.52 7.73 -2.38 -0.02 -0.54 16 40 H 0.10 -1.17 8.14 -2.39 -0.02 -1.19 16 41 H 0.16 -1.98 8.05 -2.91 -0.02 -2.00 16 42 H 0.16 -1.45 8.06 -2.91 -0.02 -1.47 16 43 H 0.14 -0.21 8.06 -2.91 -0.02 -0.23 16 44 H 0.13 0.00 6.65 -2.91 -0.02 -0.02 16 45 H 0.07 -0.29 8.14 -2.39 -0.02 -0.31 16 46 H 0.08 -0.16 6.31 -2.39 -0.02 -0.18 16 47 H 0.21 -4.49 6.30 -2.91 -0.02 -4.51 16 48 H 0.19 -3.36 4.88 -2.91 -0.01 -3.37 16 Total: 0.00 -43.43 414.81 2.29 -41.14 By element: Atomic # 1 Polarization: -29.19 SS G_CDS: -0.35 Total: -29.54 kcal Atomic # 6 Polarization: 5.36 SS G_CDS: 3.68 Total: 9.04 kcal Atomic # 7 Polarization: 6.17 SS G_CDS: -2.52 Total: 3.64 kcal Atomic # 8 Polarization: -16.17 SS G_CDS: -1.34 Total: -17.51 kcal Atomic # 9 Polarization: -1.33 SS G_CDS: 0.78 Total: -0.55 kcal Atomic # 14 Polarization: -8.27 SS G_CDS: 2.04 Total: -6.23 kcal Total: -43.43 2.29 -41.14 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705262_4549638.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -13.820 kcal (2) G-P(sol) polarization free energy of solvation -43.429 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -57.249 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.288 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.142 kcal (6) G-S(sol) free energy of system = (1) + (5) -54.962 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.39 seconds