Wall clock time and date at job start Tue Mar 9 2021 13:01:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86298 * 109.47605 * 2 1 4 4 C 1.50702 * 109.47242 * 120.00115 * 2 1 3 5 5 C 1.38243 * 119.97460 * 244.72565 * 4 2 1 6 6 C 1.38288 * 120.11731 * 179.76334 * 5 4 2 7 7 C 1.38126 * 120.04997 * 0.50905 * 6 5 4 8 8 C 1.38748 * 119.94569 * 359.74630 * 7 6 5 9 9 O 1.35898 * 120.05887 * 179.97438 * 8 7 6 10 10 C 1.42904 * 116.99761 * 0.02562 * 9 8 7 11 11 C 1.50700 * 109.47305 * 180.02562 * 10 9 8 12 12 O 1.21283 * 119.99730 * 0.02562 * 11 10 9 13 13 N 1.34773 * 120.00214 * 180.02562 * 11 10 9 14 14 C 1.46497 * 120.00031 * 179.97438 * 13 11 10 15 15 H 1.08999 * 112.84938 * 334.66754 * 14 13 11 16 16 C 1.53778 * 113.61343 * 105.86553 * 14 13 11 17 17 C 1.54055 * 86.98589 * 89.16392 * 16 14 13 18 18 H 1.09001 * 113.60692 * 270.88029 * 17 16 14 19 19 C 1.50703 * 113.62034 * 139.98073 * 17 16 14 20 20 C 1.38224 * 119.98353 * 322.22399 * 19 17 16 21 21 C 1.38271 * 120.04644 * 179.76799 * 20 19 17 22 22 C 1.38179 * 120.02632 * 0.51221 * 21 20 19 23 23 C 1.38488 * 119.97111 * 359.73957 * 22 21 20 24 24 F 1.35099 * 120.01914 * 180.02562 * 23 22 21 25 25 C 1.38216 * 119.98659 * 142.50122 * 19 17 16 26 26 C 1.53779 * 87.07842 * 25.42961 * 17 16 14 27 27 C 1.38166 * 119.97264 * 64.99337 * 4 2 1 28 28 H 0.96703 * 114.00176 * 60.00012 * 1 2 3 29 29 H 1.09000 * 109.47224 * 239.99764 * 2 1 3 30 30 H 1.48506 * 109.99834 * 298.68369 * 3 2 1 31 31 H 1.48502 * 110.00011 * 59.99633 * 3 2 1 32 32 H 1.08001 * 119.94099 * 359.97438 * 5 4 2 33 33 H 1.07993 * 119.97508 * 180.23029 * 6 5 4 34 34 H 1.07994 * 120.02621 * 179.77206 * 7 6 5 35 35 H 1.08999 * 109.47033 * 300.00348 * 10 9 8 36 36 H 1.08995 * 109.46891 * 60.00266 * 10 9 8 37 37 H 0.97002 * 120.00088 * 0.02562 * 13 11 10 38 38 H 1.09005 * 113.61232 * 203.66072 * 16 14 13 39 39 H 1.08999 * 113.61550 * 334.56425 * 16 14 13 40 40 H 1.07991 * 119.97634 * 0.02562 * 20 19 17 41 41 H 1.07997 * 119.98748 * 180.25841 * 21 20 19 42 42 H 1.07994 * 120.01301 * 179.77311 * 22 21 20 43 43 H 1.08005 * 120.01412 * 359.95118 * 25 19 17 44 44 H 1.09002 * 113.61508 * 220.02443 * 26 17 16 45 45 H 1.08996 * 113.61293 * 89.12401 * 26 17 16 46 46 H 1.08002 * 120.02741 * 359.96704 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6436 -0.0130 2.1882 6 6 3.1017 -0.6609 3.3208 7 6 2.8576 -2.0095 3.4927 8 6 2.1475 -2.7129 2.5303 9 8 1.9064 -4.0400 2.6968 10 6 2.4130 -4.6470 3.8872 11 6 2.0522 -6.1101 3.8978 12 8 1.4235 -6.5863 2.9763 13 7 2.4281 -6.8895 4.9310 14 6 2.0768 -8.3117 4.9415 15 1 1.1899 -8.5330 4.3478 16 6 3.2648 -9.2418 4.6446 17 6 3.5377 -9.2434 6.1608 18 1 4.1985 -8.4400 6.4862 19 6 3.9431 -10.5911 6.6999 20 6 3.3531 -11.7390 6.2051 21 6 3.7275 -12.9764 6.6955 22 6 4.6844 -13.0661 7.6883 23 6 5.2724 -11.9163 8.1884 24 9 6.2084 -12.0028 9.1587 25 6 4.9005 -10.6783 7.6930 26 6 2.0446 -8.9279 6.3502 27 6 1.6844 -2.0595 1.3977 28 1 -0.3934 0.4417 -0.7651 29 1 1.7923 -0.5139 -0.8900 30 1 1.5879 2.4585 -1.2243 31 1 1.5615 2.4679 1.2085 32 1 2.8396 1.0405 2.0534 33 1 3.6547 -0.1130 4.0693 34 1 3.2187 -2.5159 4.3755 35 1 3.4974 -4.5403 3.9162 36 1 1.9765 -4.1585 4.7582 37 1 2.9306 -6.5086 5.6681 38 1 2.9699 -10.2154 4.2531 39 1 4.0530 -8.7698 4.0581 40 1 2.6022 -11.6696 5.4321 41 1 3.2689 -13.8729 6.3053 42 1 4.9740 -14.0325 8.0737 43 1 5.3587 -9.7809 8.0820 44 1 1.8483 -8.2025 7.1397 45 1 1.4167 -9.8157 6.4241 46 1 1.1311 -2.6048 0.6474 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705262_4860298.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:01:03 Heat of formation + Delta-G solvation = -60.107051 kcal Electronic energy + Delta-G solvation = -29536.797029 eV Core-core repulsion = 25080.957432 eV Total energy + Delta-G solvation = -4455.839598 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.141 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -49.83227 -41.82183 -41.27320 -40.26155 -39.09918 -38.47384 -37.34911 -34.71767 -32.60432 -32.32647 -31.67957 -31.25778 -29.31086 -26.91308 -26.85859 -26.24539 -23.86569 -23.64844 -23.14853 -22.47569 -21.59955 -20.39791 -19.23291 -18.56840 -18.52787 -18.15089 -17.50899 -17.44607 -17.36627 -17.14368 -17.02346 -16.70670 -16.54194 -15.96398 -15.84423 -15.66114 -15.43799 -15.26100 -14.82895 -14.60788 -14.54532 -14.25527 -14.04984 -13.92023 -13.76390 -13.71147 -13.58604 -13.33419 -13.03178 -12.92737 -12.85670 -12.48912 -12.17013 -11.99534 -11.93316 -11.86014 -11.66332 -11.43429 -10.94902 -10.52984 -10.25015 -9.98399 -9.89923 -9.65959 -9.24752 -4.96952 0.10045 0.16342 0.21608 0.42924 1.23389 1.40051 1.42373 1.59314 1.94488 2.48709 2.49660 2.63871 3.17362 3.23963 3.33411 3.40082 3.49688 3.55218 3.69278 3.72720 3.77925 3.80110 3.88198 3.88628 3.94285 4.01579 4.04852 4.11273 4.21466 4.24352 4.32181 4.47093 4.51984 4.55341 4.61209 4.66247 4.70279 4.80112 4.83862 4.93266 4.98528 5.02085 5.10090 5.23915 5.27721 5.34619 5.36585 5.47792 5.48970 5.65431 5.85671 6.19975 6.35815 6.43585 7.03507 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.079 4.079 3 Si 0.689 3.311 4 C -0.033 4.033 5 C -0.151 4.151 6 C -0.072 4.072 7 C -0.206 4.206 8 C 0.128 3.872 9 O -0.288 6.288 10 C 0.041 3.959 11 C 0.519 3.481 12 O -0.508 6.508 13 N -0.711 5.711 14 C 0.121 3.879 15 H 0.108 0.892 16 C -0.143 4.143 17 C -0.076 4.076 18 H 0.100 0.900 19 C -0.043 4.043 20 C -0.128 4.128 21 C -0.086 4.086 22 C -0.158 4.158 23 C 0.101 3.899 24 F -0.139 7.139 25 C -0.151 4.151 26 C -0.134 4.134 27 C -0.119 4.119 28 H 0.381 0.619 29 H 0.079 0.921 30 H -0.261 1.261 31 H -0.255 1.255 32 H 0.130 0.870 33 H 0.132 0.868 34 H 0.130 0.870 35 H 0.096 0.904 36 H 0.095 0.905 37 H 0.403 0.597 38 H 0.098 0.902 39 H 0.077 0.923 40 H 0.131 0.869 41 H 0.134 0.866 42 H 0.135 0.865 43 H 0.134 0.866 44 H 0.079 0.921 45 H 0.102 0.898 46 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.305 1.127 1.750 3.906 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.188 4.188 3 Si 0.590 3.410 4 C -0.033 4.033 5 C -0.169 4.169 6 C -0.090 4.090 7 C -0.225 4.225 8 C 0.083 3.917 9 O -0.201 6.201 10 C -0.038 4.038 11 C 0.304 3.696 12 O -0.382 6.382 13 N -0.365 5.365 14 C 0.016 3.984 15 H 0.126 0.874 16 C -0.182 4.182 17 C -0.094 4.094 18 H 0.119 0.881 19 C -0.043 4.043 20 C -0.146 4.146 21 C -0.104 4.104 22 C -0.177 4.177 23 C 0.082 3.918 24 F -0.118 7.118 25 C -0.170 4.170 26 C -0.172 4.172 27 C -0.138 4.138 28 H 0.229 0.771 29 H 0.097 0.903 30 H -0.186 1.186 31 H -0.180 1.180 32 H 0.147 0.853 33 H 0.150 0.850 34 H 0.148 0.852 35 H 0.114 0.886 36 H 0.113 0.887 37 H 0.238 0.762 38 H 0.117 0.883 39 H 0.096 0.904 40 H 0.149 0.851 41 H 0.152 0.848 42 H 0.153 0.847 43 H 0.152 0.848 44 H 0.098 0.902 45 H 0.120 0.880 46 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 2.638 1.177 1.516 3.263 hybrid contribution -0.426 -0.056 0.396 0.584 sum 2.212 1.121 1.912 3.131 Atomic orbital electron populations 1.86602 1.17564 1.80217 1.49776 1.24859 0.84692 1.11164 0.98129 0.94962 0.91613 0.74274 0.80192 1.19023 0.96746 0.92734 0.94819 1.20925 1.01432 0.99852 0.94708 1.20879 0.97723 0.93575 0.96869 1.21281 1.04763 0.96057 1.00367 1.18995 0.95485 0.82395 0.94811 1.86166 1.73811 1.20110 1.39987 1.22448 1.00727 0.91717 0.88912 1.20047 0.79641 0.87437 0.82517 1.90794 1.37844 1.74758 1.34763 1.45478 1.58438 1.09188 1.23410 1.21863 0.99026 0.79398 0.98118 0.87411 1.23633 0.98763 1.00753 0.95008 1.21697 0.97024 0.94175 0.96507 0.88145 1.19508 0.94899 0.95028 0.94877 1.21107 1.00845 0.91766 1.00907 1.21052 0.95898 0.98193 0.95264 1.21224 0.99112 0.97926 0.99423 1.17738 0.90150 0.94630 0.89304 1.91523 1.62739 1.97130 1.60393 1.21044 1.00150 0.96628 0.99193 1.23430 0.95552 1.01723 0.96457 1.20247 1.02559 0.93705 0.97277 0.77129 0.90308 1.18627 1.17954 0.85293 0.84991 0.85210 0.88641 0.88696 0.76242 0.88333 0.90424 0.85106 0.84789 0.84678 0.84810 0.90202 0.88005 0.84759 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.01 12.81 -35.23 -0.45 -1.46 16 2 C -0.08 -0.04 2.79 36.01 0.10 0.06 16 3 Si 0.69 -0.56 29.84 -169.99 -5.07 -5.64 16 4 C -0.03 -0.06 5.38 -104.65 -0.56 -0.63 16 5 C -0.15 -0.09 8.67 -39.56 -0.34 -0.43 16 6 C -0.07 0.02 10.04 -39.60 -0.40 -0.37 16 7 C -0.21 0.00 9.04 -39.43 -0.36 -0.35 16 8 C 0.13 0.30 6.69 -39.22 -0.26 0.04 16 9 O -0.29 -0.91 9.67 -39.33 -0.38 -1.29 16 10 C 0.04 -0.04 5.22 36.01 0.19 0.14 16 11 C 0.52 0.49 7.91 -10.99 -0.09 0.41 16 12 O -0.51 -3.09 16.12 -14.35 -0.23 -3.32 16 13 N -0.71 1.71 5.26 -53.02 -0.28 1.43 16 14 C 0.12 -0.23 4.29 -67.12 -0.29 -0.52 16 15 H 0.11 0.00 7.50 -51.93 -0.39 -0.39 16 16 C -0.14 0.33 7.27 -25.78 -0.19 0.14 16 17 C -0.08 0.23 3.87 -90.81 -0.35 -0.12 16 18 H 0.10 -0.40 8.10 -51.93 -0.42 -0.83 16 19 C -0.04 0.05 5.29 -104.63 -0.55 -0.50 16 20 C -0.13 0.18 8.60 -39.57 -0.34 -0.16 16 21 C -0.09 0.09 10.04 -39.59 -0.40 -0.31 16 22 C -0.16 -0.03 10.03 -39.51 -0.40 -0.42 16 23 C 0.10 0.13 7.30 -39.42 -0.29 -0.15 16 24 F -0.14 -0.39 17.27 2.25 0.04 -0.36 16 25 C -0.15 0.01 9.69 -39.52 -0.38 -0.37 16 26 C -0.13 0.45 7.29 -25.92 -0.19 0.26 16 27 C -0.12 -0.36 9.62 -39.43 -0.38 -0.74 16 28 H 0.38 -0.86 8.74 45.56 0.40 -0.46 16 29 H 0.08 -0.09 7.96 -51.93 -0.41 -0.50 16 30 H -0.26 -0.30 7.11 56.52 0.40 0.10 16 31 H -0.25 -0.55 7.05 56.52 0.40 -0.15 16 32 H 0.13 -0.15 4.86 -52.49 -0.26 -0.40 16 33 H 0.13 -0.38 8.06 -52.49 -0.42 -0.80 16 34 H 0.13 -0.38 6.30 -52.49 -0.33 -0.71 16 35 H 0.10 -0.36 7.66 -51.93 -0.40 -0.76 16 36 H 0.10 -0.33 7.66 -51.93 -0.40 -0.73 16 37 H 0.40 -2.23 8.70 -40.82 -0.36 -2.59 16 38 H 0.10 -0.25 6.33 -51.93 -0.33 -0.58 16 39 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 40 H 0.13 -0.41 6.67 -52.49 -0.35 -0.76 16 41 H 0.13 -0.41 8.06 -52.49 -0.42 -0.83 16 42 H 0.14 -0.14 8.06 -52.49 -0.42 -0.57 16 43 H 0.13 -0.19 8.06 -52.48 -0.42 -0.62 16 44 H 0.08 -0.31 8.14 -51.93 -0.42 -0.74 16 45 H 0.10 -0.35 7.71 -51.93 -0.40 -0.75 16 46 H 0.13 0.45 8.06 -52.49 -0.42 0.03 16 LS Contribution 388.93 15.07 5.86 5.86 Total: 0.00 -10.55 388.93 -11.79 -22.34 By element: Atomic # 1 Polarization: -7.76 SS G_CDS: -5.80 Total: -13.56 kcal Atomic # 6 Polarization: 1.46 SS G_CDS: -5.47 Total: -4.01 kcal Atomic # 7 Polarization: 1.71 SS G_CDS: -0.28 Total: 1.43 kcal Atomic # 8 Polarization: -5.00 SS G_CDS: -1.06 Total: -6.06 kcal Atomic # 9 Polarization: -0.39 SS G_CDS: 0.04 Total: -0.36 kcal Atomic # 14 Polarization: -0.56 SS G_CDS: -5.07 Total: -5.64 kcal Total LS contribution 5.86 Total: 5.86 kcal Total: -10.55 -11.79 -22.34 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705262_4860298.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -37.766 kcal (2) G-P(sol) polarization free energy of solvation -10.551 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -48.317 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.790 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.341 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.107 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds