Wall clock time and date at job start Tue Mar 9 2021 13:01:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46496 * 1 3 3 C 1.37638 * 125.67479 * 2 1 4 4 C 1.46673 * 126.22900 * 359.97438 * 3 2 1 5 5 O 1.21693 * 119.99702 * 354.28123 * 4 3 2 6 6 N 1.34773 * 120.00234 * 174.27809 * 4 3 2 7 7 C 1.46504 * 119.99811 * 185.09386 * 6 4 3 8 8 H 1.09002 * 112.84897 * 336.19855 * 7 6 4 9 9 C 1.53788 * 113.61129 * 107.50261 * 7 6 4 10 10 C 1.53788 * 87.08040 * 89.11485 * 9 7 6 11 11 H 1.09000 * 113.69021 * 270.87563 * 10 9 7 12 12 C 1.50693 * 113.61164 * 139.97924 * 10 9 7 13 13 C 1.38177 * 119.98607 * 142.50301 * 12 10 9 14 14 C 1.38483 * 119.97529 * 179.97438 * 13 12 10 15 15 F 1.35101 * 120.02338 * 179.97438 * 14 13 12 16 16 C 1.38438 * 119.94711 * 0.02562 * 14 13 12 17 17 C 1.38212 * 119.97533 * 359.97438 * 16 14 13 18 18 C 1.38221 * 120.02794 * 359.73236 * 17 16 14 19 19 C 1.53779 * 113.61351 * 204.99947 * 7 6 4 20 20 C 1.37893 * 107.54679 * 179.97438 * 3 2 1 21 21 C 1.39874 * 107.09246 * 359.97438 * 20 3 2 22 22 Br 1.89098 * 126.06977 * 180.02562 * 21 20 3 23 23 C 1.35501 * 107.85488 * 0.26405 * 21 20 3 24 24 C 1.50697 * 125.57463 * 179.73572 * 23 21 20 25 25 O 1.42898 * 109.47421 * 124.76514 * 24 23 21 26 26 Si 1.86295 * 109.47398 * 244.77006 * 24 23 21 27 27 H 1.09000 * 109.47152 * 93.98963 * 1 2 3 28 28 H 1.09003 * 109.47466 * 213.98788 * 1 2 3 29 29 H 1.08996 * 109.47516 * 333.98334 * 1 2 3 30 30 H 0.96999 * 120.00111 * 5.09388 * 6 4 3 31 31 H 1.08999 * 113.61299 * 203.66224 * 9 7 6 32 32 H 1.09000 * 113.61355 * 334.56685 * 9 7 6 33 33 H 1.08000 * 120.01117 * 0.02562 * 13 12 10 34 34 H 1.08001 * 120.01161 * 180.02562 * 16 14 13 35 35 H 1.08001 * 119.98814 * 180.02562 * 17 16 14 36 36 H 1.08002 * 119.98030 * 180.29351 * 18 17 16 37 37 H 1.09001 * 113.61678 * 25.43062 * 19 7 6 38 38 H 1.08989 * 113.61482 * 156.33972 * 19 7 6 39 39 H 1.08003 * 126.45076 * 180.02562 * 20 3 2 40 40 H 1.09007 * 109.47034 * 4.76686 * 24 23 21 41 41 H 0.96702 * 114.00552 * 180.02562 * 25 24 23 42 42 H 1.48499 * 109.99771 * 294.72668 * 26 24 23 43 43 H 1.48498 * 110.00260 * 56.04555 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2676 1.1181 0.0000 4 6 1.8121 2.5123 -0.0005 5 8 0.6263 2.7648 -0.1060 6 7 2.7066 3.5136 0.1159 7 6 2.2444 4.8993 0.2277 8 1 1.2509 5.0495 -0.1948 9 6 2.4133 5.4932 1.6362 10 6 3.8165 5.9408 1.1937 11 1 4.5911 5.1954 1.3742 12 6 4.1969 7.3120 1.6894 13 6 5.4963 7.5680 2.0837 14 6 5.8458 8.8284 2.5386 15 9 7.1158 9.0795 2.9248 16 6 4.8925 9.8304 2.5984 17 6 3.5934 9.5721 2.2035 18 6 3.2471 8.3154 1.7439 19 6 3.2785 5.9338 -0.2470 20 6 3.5781 0.6891 0.0006 21 6 3.5528 -0.7095 0.0015 22 35 5.0610 -1.8503 0.0033 23 6 2.2558 -1.1015 -0.0044 24 6 1.7713 -2.5285 -0.0113 25 8 0.8869 -2.7366 1.0916 26 14 0.8683 -2.8701 -1.6046 27 1 -0.3633 -0.0715 -1.0252 28 1 -0.3634 -0.8521 0.5745 29 1 -0.3634 0.9235 0.4507 30 1 3.6563 3.3168 0.1257 31 1 1.7363 6.3217 1.8447 32 1 2.4233 4.7439 2.4277 33 1 6.2392 6.7855 2.0362 34 1 5.1640 10.8139 2.9527 35 1 2.8496 10.3538 2.2497 36 1 2.2328 8.1158 1.4310 37 1 3.9872 5.5401 -0.9756 38 1 2.8382 6.8826 -0.5532 39 1 4.4583 1.3150 0.0011 40 1 2.6240 -3.2021 0.0746 41 1 0.5358 -3.6358 1.1501 42 1 -0.3665 -2.0481 -1.6748 43 1 1.7474 -2.5658 -2.7620 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705262_5000100.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:01:14 Heat of formation + Delta-G solvation = 2.415548 kcal Electronic energy + Delta-G solvation = -29376.579021 eV Core-core repulsion = 24965.115025 eV Total energy + Delta-G solvation = -4411.463995 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 409.048 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -49.93937 -42.97537 -41.51176 -40.14293 -38.66442 -37.75571 -35.15641 -34.31005 -32.54163 -31.92946 -31.26803 -30.95070 -27.52032 -27.45080 -26.73275 -25.95754 -23.82506 -23.44578 -22.71652 -21.79358 -20.62630 -20.18245 -19.00115 -18.55348 -18.38243 -17.45561 -17.33455 -17.07677 -17.05817 -16.78980 -16.64472 -16.14336 -15.81634 -15.80734 -15.39820 -15.08701 -14.77339 -14.59298 -14.50159 -14.37841 -14.28353 -14.16408 -13.91623 -13.85928 -13.52695 -13.34443 -13.01667 -12.84228 -12.80750 -12.73900 -12.16026 -11.99463 -11.81775 -11.73865 -11.43674 -11.31123 -11.18118 -10.67825 -10.27372 -9.91859 -9.91506 -9.62493 -9.38429 -5.13811 0.02189 0.14402 0.22693 0.51213 0.86691 1.23331 1.34395 1.53977 1.86046 2.01922 2.13431 2.55659 3.07546 3.21520 3.38822 3.42686 3.57518 3.62599 3.65661 3.68455 3.85108 3.94094 3.98821 4.04511 4.07581 4.13730 4.23696 4.24180 4.36254 4.40885 4.47044 4.53649 4.63272 4.75093 4.79602 4.85118 4.91632 4.99201 5.07668 5.10545 5.15457 5.16883 5.36215 5.42127 5.49406 5.59787 5.69787 5.92244 6.29177 6.75556 6.93808 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.058 3.942 2 N -0.399 5.399 3 C -0.054 4.054 4 C 0.594 3.406 5 O -0.573 6.573 6 N -0.685 5.685 7 C 0.116 3.884 8 H 0.095 0.905 9 C -0.139 4.139 10 C -0.069 4.069 11 H 0.111 0.889 12 C -0.044 4.044 13 C -0.159 4.159 14 C 0.072 3.928 15 F -0.155 7.155 16 C -0.169 4.169 17 C -0.089 4.089 18 C -0.128 4.128 19 C -0.123 4.123 20 C -0.103 4.103 21 C -0.179 4.179 22 Br -0.009 7.009 23 C 0.078 3.922 24 C -0.058 4.058 25 O -0.557 6.557 26 Si 0.775 3.225 27 H 0.075 0.925 28 H 0.111 0.889 29 H 0.100 0.900 30 H 0.417 0.583 31 H 0.106 0.894 32 H 0.068 0.932 33 H 0.142 0.858 34 H 0.141 0.859 35 H 0.155 0.845 36 H 0.150 0.850 37 H 0.088 0.912 38 H 0.109 0.891 39 H 0.184 0.816 40 H 0.108 0.892 41 H 0.411 0.589 42 H -0.274 1.274 43 H -0.297 1.297 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.613 -3.136 -0.960 3.655 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 N -0.072 5.072 3 C -0.168 4.168 4 C 0.382 3.618 5 O -0.455 6.455 6 N -0.336 5.336 7 C 0.011 3.989 8 H 0.113 0.887 9 C -0.178 4.178 10 C -0.088 4.088 11 H 0.129 0.871 12 C -0.044 4.044 13 C -0.178 4.178 14 C 0.053 3.947 15 F -0.134 7.134 16 C -0.188 4.188 17 C -0.107 4.107 18 C -0.146 4.146 19 C -0.161 4.161 20 C -0.129 4.129 21 C -0.265 4.265 22 Br 0.075 6.925 23 C -0.043 4.043 24 C -0.168 4.168 25 O -0.368 6.368 26 Si 0.678 3.322 27 H 0.094 0.906 28 H 0.129 0.871 29 H 0.118 0.882 30 H 0.255 0.745 31 H 0.125 0.875 32 H 0.086 0.914 33 H 0.160 0.840 34 H 0.159 0.841 35 H 0.173 0.827 36 H 0.168 0.832 37 H 0.106 0.894 38 H 0.127 0.873 39 H 0.201 0.799 40 H 0.126 0.874 41 H 0.264 0.736 42 H -0.200 1.200 43 H -0.224 1.224 Dipole moment (debyes) X Y Z Total from point charges -2.420 -2.371 -1.620 3.756 hybrid contribution 0.925 0.728 0.493 1.276 sum -1.495 -1.643 -1.127 2.491 Atomic orbital electron populations 1.22597 0.74763 1.06763 1.04103 1.43948 1.07627 1.04309 1.51348 1.20215 0.90362 0.87905 1.18331 1.16902 0.85475 0.83623 0.75767 1.90797 1.17649 1.84984 1.52027 1.45194 1.10029 1.05252 1.73134 1.21938 0.99630 0.79530 0.97773 0.88706 1.23586 0.96423 1.01178 0.96602 1.21649 0.97655 0.92983 0.96469 0.87134 1.19680 0.91962 0.96069 0.96718 1.21230 0.98299 0.95750 1.02511 1.18069 0.79224 0.95755 1.01629 1.91476 1.37843 1.94957 1.89099 1.21419 0.93915 0.99607 1.03821 1.21335 0.95282 0.97941 0.96156 1.21401 1.00672 0.92512 1.00034 1.23402 0.97538 0.99329 0.95787 1.21562 0.95532 0.92983 1.02859 1.20992 0.91411 0.95134 1.18916 1.96663 1.34942 1.62715 1.98186 1.20103 0.89324 0.88993 1.05852 1.24493 0.99740 0.90348 1.02174 1.86395 1.64097 1.38509 1.47778 0.94759 0.77166 0.88635 0.71644 0.90640 0.87069 0.88167 0.74535 0.87547 0.91352 0.84045 0.84095 0.82745 0.83215 0.89354 0.87284 0.79857 0.87401 0.73575 1.20016 1.22409 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.29 8.85 127.77 1.13 1.42 16 2 N -0.40 -2.71 3.12 -519.62 -1.62 -4.33 16 3 C -0.05 -0.30 6.88 40.35 0.28 -0.02 16 4 C 0.59 3.32 7.77 86.45 0.67 3.99 16 5 O -0.57 -6.86 14.24 -4.33 -0.06 -6.92 16 6 N -0.69 1.18 5.25 -443.99 -2.33 -1.15 16 7 C 0.12 -0.34 4.36 45.52 0.20 -0.15 16 8 H 0.09 0.07 7.41 -2.39 -0.02 0.05 16 9 C -0.14 0.60 7.25 31.13 0.23 0.82 16 10 C -0.07 0.40 3.86 -11.01 -0.04 0.36 16 11 H 0.11 -0.83 8.09 -2.39 -0.02 -0.85 16 12 C -0.04 0.10 5.29 -19.87 -0.11 0.00 16 13 C -0.16 -0.15 9.69 22.31 0.22 0.06 16 14 C 0.07 0.31 7.30 22.38 0.16 0.47 16 15 F -0.15 -1.23 17.27 44.97 0.78 -0.45 16 16 C -0.17 -0.21 10.03 22.31 0.22 0.01 16 17 C -0.09 0.21 10.04 22.26 0.22 0.43 16 18 C -0.13 0.44 8.59 22.27 0.19 0.63 16 19 C -0.12 0.82 7.29 31.12 0.23 1.05 16 20 C -0.10 -0.24 10.34 22.58 0.23 -0.01 16 21 C -0.18 -0.83 6.53 22.03 0.14 -0.68 16 22 Br -0.01 -0.02 33.06 -20.37 -0.67 -0.70 16 23 C 0.08 0.40 5.14 41.34 0.21 0.62 16 24 C -0.06 0.05 2.78 71.23 0.20 0.25 16 25 O -0.56 1.57 11.30 -148.98 -1.68 -0.11 16 26 Si 0.78 -1.93 31.52 68.60 2.16 0.23 16 27 H 0.08 0.38 7.07 -2.39 -0.02 0.37 16 28 H 0.11 0.25 6.38 -2.39 -0.02 0.24 16 29 H 0.10 0.72 6.23 -2.39 -0.01 0.70 16 30 H 0.42 -2.88 7.60 -92.71 -0.70 -3.59 16 31 H 0.11 -0.61 6.32 -2.39 -0.02 -0.62 16 32 H 0.07 -0.13 8.14 -2.39 -0.02 -0.15 16 33 H 0.14 -0.21 8.05 -2.91 -0.02 -0.23 16 34 H 0.14 -0.14 8.06 -2.91 -0.02 -0.16 16 35 H 0.15 -1.09 8.06 -2.91 -0.02 -1.11 16 36 H 0.15 -1.14 6.67 -2.91 -0.02 -1.16 16 37 H 0.09 -0.68 8.14 -2.39 -0.02 -0.70 16 38 H 0.11 -0.83 7.71 -2.39 -0.02 -0.85 16 39 H 0.18 -0.83 7.45 -2.91 -0.02 -0.85 16 40 H 0.11 -0.37 6.96 -2.38 -0.02 -0.38 16 41 H 0.41 -5.59 8.74 -74.06 -0.65 -6.24 16 42 H -0.27 -0.57 5.95 99.48 0.59 0.02 16 43 H -0.30 -1.59 7.11 99.48 0.71 -0.89 16 Total: 0.00 -21.20 377.89 0.62 -20.58 By element: Atomic # 1 Polarization: -16.06 SS G_CDS: -0.34 Total: -16.40 kcal Atomic # 6 Polarization: 4.86 SS G_CDS: 4.39 Total: 9.25 kcal Atomic # 7 Polarization: -1.53 SS G_CDS: -3.95 Total: -5.48 kcal Atomic # 8 Polarization: -5.29 SS G_CDS: -1.74 Total: -7.03 kcal Atomic # 9 Polarization: -1.23 SS G_CDS: 0.78 Total: -0.45 kcal Atomic # 14 Polarization: -1.93 SS G_CDS: 2.16 Total: 0.23 kcal Atomic # 35 Polarization: -0.02 SS G_CDS: -0.67 Total: -0.70 kcal Total: -21.20 0.62 -20.58 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705262_5000100.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 22.993 kcal (2) G-P(sol) polarization free energy of solvation -21.197 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 1.797 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.619 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.578 kcal (6) G-S(sol) free energy of system = (1) + (5) 2.416 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds